PVX_094540 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PVX_094540OTHER0.9999490.0000270.000024
No Results

  • Fasta :-

    >PVX_094540 MRKKNRAKGRECARKDDKSDVSGHYETRGSQEIPQPDFNSSMVYLNIYDLDAVSKVVNTV ARSMGAGAFHAGVEVYGYEYSFGYIVDGETGVTKTSARYHPYHVKTPLTKEEVDLLVEVM KLQWIGDTYDILSRNCLNYADYFCNLLDVGSIPEWVMSLQKKVTWVKSNINVAASKLKEL NKAAGIPTVINFIKKKYNDNGEDYEGCKVIVKS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_094540.fa Sequence name : PVX_094540 Sequence length : 213 VALUES OF COMPUTED PARAMETERS Coef20 : 3.795 CoefTot : -0.177 ChDiff : 2 ZoneTo : 10 KR : 6 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.441 0.971 -0.085 0.451 MesoH : -0.681 0.199 -0.425 0.189 MuHd_075 : 7.980 5.973 2.309 2.331 MuHd_095 : 37.639 14.151 9.103 8.012 MuHd_100 : 28.814 10.104 7.647 5.551 MuHd_105 : 14.361 4.927 5.897 2.099 Hmax_075 : -30.400 -9.100 -8.704 -3.870 Hmax_095 : -20.650 -7.525 -6.102 -1.794 Hmax_100 : -18.300 -5.700 -4.671 -2.150 Hmax_105 : -28.300 -10.033 -6.496 -4.870 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5442 0.4558 DFMC : 0.5051 0.4949
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 213 PVX_094540 MRKKNRAKGRECARKDDKSDVSGHYETRGSQEIPQPDFNSSMVYLNIYDLDAVSKVVNTVARSMGAGAFHAGVEVYGYEY 80 SFGYIVDGETGVTKTSARYHPYHVKTPLTKEEVDLLVEVMKLQWIGDTYDILSRNCLNYADYFCNLLDVGSIPEWVMSLQ 160 KKVTWVKSNINVAASKLKELNKAAGIPTVINFIKKKYNDNGEDYEGCKVIVKS 240 ................................................................................ 80 ................................................................................ 160 ..................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_094540 2 -----MR|KK 0.085 . PVX_094540 3 ----MRK|KN 0.094 . PVX_094540 4 ---MRKK|NR 0.103 . PVX_094540 6 -MRKKNR|AK 0.133 . PVX_094540 8 RKKNRAK|GR 0.082 . PVX_094540 10 KNRAKGR|EC 0.135 . PVX_094540 14 KGRECAR|KD 0.107 . PVX_094540 15 GRECARK|DD 0.105 . PVX_094540 18 CARKDDK|SD 0.072 . PVX_094540 28 SGHYETR|GS 0.099 . PVX_094540 55 DLDAVSK|VV 0.076 . PVX_094540 62 VVNTVAR|SM 0.307 . PVX_094540 94 GETGVTK|TS 0.060 . PVX_094540 98 VTKTSAR|YH 0.098 . PVX_094540 105 YHPYHVK|TP 0.061 . PVX_094540 110 VKTPLTK|EE 0.058 . PVX_094540 121 LLVEVMK|LQ 0.066 . PVX_094540 134 TYDILSR|NC 0.069 . PVX_094540 161 WVMSLQK|KV 0.070 . PVX_094540 162 VMSLQKK|VT 0.119 . PVX_094540 167 KKVTWVK|SN 0.080 . PVX_094540 176 INVAASK|LK 0.059 . PVX_094540 178 VAASKLK|EL 0.070 . PVX_094540 182 KLKELNK|AA 0.074 . PVX_094540 194 TVINFIK|KK 0.064 . PVX_094540 195 VINFIKK|KY 0.115 . PVX_094540 196 INFIKKK|YN 0.228 . PVX_094540 208 EDYEGCK|VI 0.060 . PVX_094540 212 GCKVIVK|S- 0.077 . ____________________________^_________________

  • Fasta :-

    >PVX_094540 ATGAGGAAGAAAAACCGAGCCAAGGGAAGAGAATGCGCAAGGAAAGATGACAAAAGCGAC GTGTCTGGGCATTACGAAACGAGGGGCTCCCAGGAAATCCCCCAGCCGGATTTCAATTCC AGTATGGTCTACTTAAATATATATGACTTGGATGCCGTTTCCAAGGTTGTCAACACGGTG GCTAGATCGATGGGCGCGGGCGCCTTTCACGCCGGCGTAGAAGTCTACGGCTATGAGTAC TCATTCGGTTACATAGTAGACGGAGAAACGGGGGTGACCAAAACGAGCGCCCGCTATCAT CCCTACCACGTTAAAACTCCACTGACGAAGGAAGAAGTAGACCTCTTGGTTGAGGTGATG AAGCTGCAGTGGATCGGAGACACCTACGACATATTGTCAAGGAACTGCCTTAACTATGCC GACTACTTCTGCAACTTGCTGGATGTCGGCAGCATCCCCGAATGGGTCATGAGTTTACAA AAAAAAGTCACATGGGTAAAGTCAAACATAAATGTCGCGGCGTCAAAGTTGAAGGAATTA AACAAAGCTGCTGGAATACCAACAGTGATAAACTTCATAAAGAAAAAGTACAACGACAAT GGTGAAGACTACGAAGGATGTAAAGTGATTGTAAAATCGTAG
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  • Fasta :-

    MRKKNRAKGRECARKDDKSDVSGHYETRGSQEIPQPDFNSSMVYLNIYDLDAVSKVVNTV ARSMGAGAFHAGVEVYGYEYSFGYIVDGETGVTKTSARYHPYHVKTPLTKEEVDLLVEVM KLQWIGDTYDILSRNCLNYADYFCNLLDVGSIPEWVMSLQKKVTWVKSNINVAASKLKEL NKAAGIPTVINFIKKKYNDNGEDYEGCKVIVKS

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PVX_094540      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India