PVX_094615 | 26S protease regulatory subunit 4, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_094615OTHER0.9999840.0000030.000014
No Results

  • Fasta :-

    >PVX_094615 MGNTQGGMNNNPYGFLGKKDDKDKGKDKEKKKLESAPPSHIGKRKKKKKGVTGHSKLPTV TPNTKCRLKLLKLERIKDYLLLEEEFITNQEQIKTTEDKNYVKLKIDDLRGSPMSVGTLE ELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSV MKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKT LLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEDHAPSIVFIDEIDAVGTK RYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL PNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMK ITQVDLRKARDKALYQKKGNIPEGLYL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_094615.fa Sequence name : PVX_094615 Sequence length : 447 VALUES OF COMPUTED PARAMETERS Coef20 : 2.412 CoefTot : -2.455 ChDiff : 1 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.671 1.453 -0.008 0.502 MesoH : -0.728 0.408 -0.388 0.253 MuHd_075 : 20.949 11.831 7.303 5.015 MuHd_095 : 19.637 13.693 4.568 3.000 MuHd_100 : 15.418 11.601 3.369 2.627 MuHd_105 : 5.781 5.993 2.475 1.289 Hmax_075 : 5.483 2.217 -0.534 3.453 Hmax_095 : 10.200 4.600 -1.026 2.870 Hmax_100 : 10.200 4.600 -1.026 2.800 Hmax_105 : 2.400 -0.500 -3.722 1.937 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9919 0.0081 DFMC : 0.9881 0.0119
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 447 PVX_094615 MGNTQGGMNNNPYGFLGKKDDKDKGKDKEKKKLESAPPSHIGKRKKKKKGVTGHSKLPTVTPNTKCRLKLLKLERIKDYL 80 LLEEEFITNQEQIKTTEDKNYVKLKIDDLRGSPMSVGTLEELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLN 160 NKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKT 240 LLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEDHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELL 320 NQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGA 400 DIKAICTEAGLLALRERRMKITQVDLRKARDKALYQKKGNIPEGLYL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_094615 18 PYGFLGK|KD 0.058 . PVX_094615 19 YGFLGKK|DD 0.105 . PVX_094615 22 LGKKDDK|DK 0.073 . PVX_094615 24 KKDDKDK|GK 0.076 . PVX_094615 26 DDKDKGK|DK 0.089 . PVX_094615 28 KDKGKDK|EK 0.072 . PVX_094615 30 KGKDKEK|KK 0.060 . PVX_094615 31 GKDKEKK|KL 0.149 . PVX_094615 32 KDKEKKK|LE 0.107 . PVX_094615 43 PPSHIGK|RK 0.072 . PVX_094615 44 PSHIGKR|KK 0.254 . PVX_094615 45 SHIGKRK|KK 0.126 . PVX_094615 46 HIGKRKK|KK 0.138 . PVX_094615 47 IGKRKKK|KK 0.470 . PVX_094615 48 GKRKKKK|KG 0.146 . PVX_094615 49 KRKKKKK|GV 0.320 . PVX_094615 56 GVTGHSK|LP 0.061 . PVX_094615 65 TVTPNTK|CR 0.056 . PVX_094615 67 TPNTKCR|LK 0.110 . PVX_094615 69 NTKCRLK|LL 0.054 . PVX_094615 72 CRLKLLK|LE 0.058 . PVX_094615 75 KLLKLER|IK 0.080 . PVX_094615 77 LKLERIK|DY 0.063 . PVX_094615 94 TNQEQIK|TT 0.078 . PVX_094615 99 IKTTEDK|NY 0.058 . PVX_094615 103 EDKNYVK|LK 0.063 . PVX_094615 105 KNYVKLK|ID 0.071 . PVX_094615 110 LKIDDLR|GS 0.097 . PVX_094615 148 ILSFVDK|DL 0.094 . PVX_094615 162 SVLLNNK|TN 0.058 . PVX_094615 182 PLVSVMK|VE 0.060 . PVX_094615 185 SVMKVEK|AP 0.060 . PVX_094615 205 SQIQEIK|EA 0.063 . PVX_094615 224 YEDIGIK|PP 0.057 . PVX_094615 227 IGIKPPK|GV 0.097 . PVX_094615 239 GPPGTGK|TL 0.061 . PVX_094615 244 GKTLLAK|AV 0.077 . PVX_094615 256 TSATFLR|VV 0.199 . PVX_094615 265 GSELIQK|YL 0.086 . PVX_094615 272 YLGDGPK|LV 0.074 . PVX_094615 275 DGPKLVR|EM 0.078 . PVX_094615 279 LVREMFK|VA 0.088 . PVX_094615 300 IDAVGTK|RY 0.061 . PVX_094615 301 DAVGTKR|YE 0.162 . PVX_094615 310 ATSGGER|EI 0.079 . PVX_094615 314 GEREIQR|TM 0.087 . PVX_094615 329 LDGFDSR|GD 0.100 . PVX_094615 333 DSRGDVK|VI 0.062 . PVX_094615 340 VIMATNR|ID 0.079 . PVX_094615 350 LDPALIR|PG 0.073 . PVX_094615 353 ALIRPGR|ID 0.232 . PVX_094615 356 RPGRIDR|KI 0.193 . PVX_094615 357 PGRIDRK|IQ 0.077 . PVX_094615 366 LPNPDTK|TK 0.073 . PVX_094615 368 NPDTKTK|RR 0.069 . PVX_094615 369 PDTKTKR|RI 0.226 . PVX_094615 370 DTKTKRR|IF 0.136 . PVX_094615 378 FQIHTSK|MT 0.061 . PVX_094615 394 EEFVMSK|DE 0.060 . PVX_094615 403 LSGADIK|AI 0.069 . PVX_094615 415 AGLLALR|ER 0.068 . PVX_094615 417 LLALRER|RM 0.080 . PVX_094615 418 LALRERR|MK 0.429 . PVX_094615 420 LRERRMK|IT 0.134 . PVX_094615 427 ITQVDLR|KA 0.098 . PVX_094615 428 TQVDLRK|AR 0.099 . PVX_094615 430 VDLRKAR|DK 0.285 . PVX_094615 432 LRKARDK|AL 0.086 . PVX_094615 437 DKALYQK|KG 0.060 . PVX_094615 438 KALYQKK|GN 0.119 . ____________________________^_________________

  • Fasta :-

    >PVX_094615 CCTCCCCTTGGCCGGAAAAACGAATGAAAAAAAAAAAAAATACCTCCTTTTAACGCATGT AAACGTGCATACTTGTACGTGTACATATTCACATATACATACTTACGTACGCGTAAGCGG ATGCGTGAACGCGTTAACACAGCTCTGTGCGTAGGGATATCCCTTTGGGTGGGCGCTTTT TATCGCTCCAACTCTACATTTTTTGGTTGGAAGAGAAGAACAAATAATGTGTGAGTGCTG AAAGGGTGGCTGCCGCTTAAGTGAAAGAGGAAGAAAATACCATCGGGCAAAACGTAAGGA TAAGCAGAATCGAAGAGGCACGGCAAAGTGAGAAAGCGCGCGAGCAACAGCTTAAGCGAA CATCGCTGCAAATGTGAGTAAAAGTTTTACAGATCGAAAGAGGCACAATAAATCGGCATG AACTGCGTATGATAGGAGCGCATACTCCACTGTGCACACGCCCGAACGTTCACACATAAT TGCCGCACCGTGAGCATATATTTACAACTTAGCGCAGGCCCCTTTTGCGCGTCCCCCTTT TTGTGCGTAAGCACGTTGCAAACGGTCCCACGTGGTACATTATAACCCAGGAGAAAAGAA GGCGCGAGCAAAGGGGGAACATACGCTCCTTGTGTTTACACCGGCGTAGGGCATATAAGT GTGTAGCCGCATATACACCTCCACCCGCATGCACATACCTGCGTAACTTTGCAAACCATG GGAAACACGCAAGGCGGAATGAACAACAACCCCTACGGATTTTTAGGCAAAAAAGATGAT AAGGATAAAGGAAAAGACAAGGAGAAGAAAAAGCTAGAAAGCGCGCCGCCCTCACATATA GGCAAAAGAAAGAAAAAAAAAAAAGGAGTCACGGGACATTCCAAATTACCGACGGTTACC CCCAATACGAAATGCAGATTGAAACTTCTAAAGTTGGAACGAATAAAAGATTACCTACTG TTGGAAGAAGAATTTATTACAAACCAGGAACAGATAAAAACGACGGAAGATAAAAATTAT GTGAAACTAAAAATTGACGATTTGAGAGGTTCACCAATGAGTGTTGGTACGCTGGAAGAA CTGATTGACGAAAATCACGGCATTATTGCCACGTCAGTAGGACCAGAGTACTATGTAAAT ATACTATCCTTTGTTGATAAGGATTTATTGGAGCCTGGATGTTCAGTTCTGCTAAATAAC AAAACGAACAGCGTCGTTGGCATACTGTTGGATGAAGTGGACCCATTAGTCTCAGTTATG AAAGTGGAGAAAGCCCCCCTAGAATCCTATGCAGACATTGGTGGTTTGGAGTCACAAATC CAAGAAATTAAAGAAGCAGTAGAATTGCCTCTAACCCATCCTGAGTTGTATGAAGATATT GGTATTAAACCACCAAAGGGAGTTATACTCTATGGCCCCCCAGGCACCGGAAAAACTCTC CTAGCCAAAGCGGTGGCAAACGAAACATCGGCTACTTTCCTAAGAGTTGTAGGCTCAGAA TTAATACAGAAATATTTAGGAGATGGACCTAAGCTAGTTAGAGAAATGTTTAAGGTGGCA GAAGACCACGCACCTTCCATCGTTTTTATTGACGAAATTGATGCTGTAGGTACGAAGAGA TATGAAGCGACTAGTGGAGGGGAGAGAGAAATTCAAAGAACCATGTTAGAACTACTAAAC CAGTTAGATGGTTTTGATTCGAGGGGAGATGTTAAGGTCATTATGGCAACCAACCGAATT GATTCTCTAGACCCGGCTTTAATTAGACCAGGAAGAATAGACAGAAAAATACAGCTACCT AATCCGGACACCAAAACGAAGAGAAGAATTTTCCAAATCCATACCAGCAAAATGACCATG TCTCCAGATGTCGATTTGGAAGAATTCGTTATGTCCAAGGATGAGTTATCTGGTGCAGAT ATTAAAGCCATATGTACCGAGGCAGGATTGTTGGCTCTGCGAGAAAGAAGAATGAAAATT ACGCAGGTGGACTTGCGTAAGGCGAGGGATAAAGCGCTCTACCAGAAAAAGGGCAACATC CCCGAGGGGTTGTACTTGTAG
  • Download Fasta

  • Fasta :-

    MGNTQGGMNNNPYGFLGKKDDKDKGKDKEKKKLESAPPSHIGKRKKKKKGVTGHSKLPTV TPNTKCRLKLLKLERIKDYLLLEEEFITNQEQIKTTEDKNYVKLKIDDLRGSPMSVGTLE ELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSV MKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKT LLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEDHAPSIVFIDEIDAVGTK RYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL PNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMK ITQVDLRKARDKALYQKKGNIPEGLYL

    No Results
  • title: ATP binding site
  • coordinates: P234,P235,G236,T237,G238,K239,T240,L241,D292,N339
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_094615306 SYEATSGGER0.996unspPVX_094615398 SKDELSGADI0.993unsp
PVX_094615      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India