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Computed_GO_Component_IDs:
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Computed_GO_Components:
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Computed_GO_Function_IDs:
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Computed_GO_Functions:
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Computed_GO_Process_IDs:
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Computed_GO_Processes:
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Curated_GO_Component_IDs:
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Curated_GO_Components:
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>PVX_094690
MNIKNLDDVKYRIHKIKVLNENDKKAKAVLTRAADQVMPIMKKMRFSVELLSEFLPRSPK
LLGLNIATKSEIKIRMRKKRGGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLE
YNQLYTFGKLENQISGGKKTGGTDFRICKGSPKLMAAQAAEMRLLNNFMNKDGEILNISL
GSCLTPEQYDNLFKNRKERDDKICSISNDIIVIDPSMDSTSHENGESAETSQNTKNNFKR
SNSLQGRNKDVFTLNADRVKEEEQTHVPAQDVCRKSSKIPGGSDCVHVLKVKRDCSGVKR
PENENGSTASDNVGIRKGKKRKVIILD
- Download Fasta
-
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PVX_094690.fa
Sequence name : PVX_094690
Sequence length : 327
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.617
CoefTot : -0.259
ChDiff : 14
ZoneTo : 6
KR : 1
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.341 0.724 -0.136 0.403
MesoH : -1.218 -0.005 -0.581 0.090
MuHd_075 : 11.383 5.706 0.897 1.151
MuHd_095 : 19.698 11.623 3.613 4.004
MuHd_100 : 21.708 15.876 6.128 4.759
MuHd_105 : 25.206 21.340 8.916 5.731
Hmax_075 : -9.600 6.800 -4.104 2.200
Hmax_095 : -2.975 7.000 -3.106 2.257
Hmax_100 : -6.800 6.100 -3.439 1.940
Hmax_105 : 11.550 21.000 2.647 6.557
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.8935 0.1065
DFMC : 0.9375 0.0625
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##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
327 PVX_094690
MNIKNLDDVKYRIHKIKVLNENDKKAKAVLTRAADQVMPIMKKMRFSVELLSEFLPRSPKLLGLNIATKSEIKIRMRKKR 80
GGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLEYNQLYTFGKLENQISGGKKTGGTDFRICKGSPKLMAAQAA 160
EMRLLNNFMNKDGEILNISLGSCLTPEQYDNLFKNRKERDDKICSISNDIIVIDPSMDSTSHENGESAETSQNTKNNFKR 240
SNSLQGRNKDVFTLNADRVKEEEQTHVPAQDVCRKSSKIPGGSDCVHVLKVKRDCSGVKRPENENGSTASDNVGIRKGKK 320
RKVIILD 400
...............................................................................P 80
................................................................................ 160
...............................................................................P 240
................................................................................ 320
....... 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2
Name Pos Context Score Pred
____________________________v_________________
PVX_094690 4 ---MNIK|NL 0.065 .
PVX_094690 10 KNLDDVK|YR 0.063 .
PVX_094690 12 LDDVKYR|IH 0.089 .
PVX_094690 15 VKYRIHK|IK 0.103 .
PVX_094690 17 YRIHKIK|VL 0.077 .
PVX_094690 24 VLNENDK|KA 0.076 .
PVX_094690 25 LNENDKK|AK 0.081 .
PVX_094690 27 ENDKKAK|AV 0.081 .
PVX_094690 32 AKAVLTR|AA 0.209 .
PVX_094690 42 QVMPIMK|KM 0.061 .
PVX_094690 43 VMPIMKK|MR 0.084 .
PVX_094690 45 PIMKKMR|FS 0.125 .
PVX_094690 57 LSEFLPR|SP 0.111 .
PVX_094690 60 FLPRSPK|LL 0.130 .
PVX_094690 69 GLNIATK|SE 0.090 .
PVX_094690 73 ATKSEIK|IR 0.056 .
PVX_094690 75 KSEIKIR|MR 0.107 .
PVX_094690 77 EIKIRMR|KK 0.098 .
PVX_094690 78 IKIRMRK|KR 0.327 .
PVX_094690 79 KIRMRKK|RG 0.121 .
PVX_094690 80 IRMRKKR|GG 0.755 *ProP*
PVX_094690 108 VHSGHDR|SF 0.168 .
PVX_094690 116 FYELLDK|LV 0.059 .
PVX_094690 129 QLYTFGK|LE 0.068 .
PVX_094690 138 NQISGGK|KT 0.061 .
PVX_094690 139 QISGGKK|TG 0.126 .
PVX_094690 146 TGGTDFR|IC 0.095 .
PVX_094690 149 TDFRICK|GS 0.131 .
PVX_094690 153 ICKGSPK|LM 0.064 .
PVX_094690 163 AQAAEMR|LL 0.080 .
PVX_094690 171 LNNFMNK|DG 0.081 .
PVX_094690 194 QYDNLFK|NR 0.053 .
PVX_094690 196 DNLFKNR|KE 0.085 .
PVX_094690 197 NLFKNRK|ER 0.088 .
PVX_094690 199 FKNRKER|DD 0.359 .
PVX_094690 202 RKERDDK|IC 0.161 .
PVX_094690 235 ETSQNTK|NN 0.062 .
PVX_094690 239 NTKNNFK|RS 0.056 .
PVX_094690 240 TKNNFKR|SN 0.581 *ProP*
PVX_094690 247 SNSLQGR|NK 0.112 .
PVX_094690 249 SLQGRNK|DV 0.098 .
PVX_094690 258 FTLNADR|VK 0.076 .
PVX_094690 260 LNADRVK|EE 0.066 .
PVX_094690 274 PAQDVCR|KS 0.128 .
PVX_094690 275 AQDVCRK|SS 0.101 .
PVX_094690 278 VCRKSSK|IP 0.076 .
PVX_094690 290 DCVHVLK|VK 0.059 .
PVX_094690 292 VHVLKVK|RD 0.059 .
PVX_094690 293 HVLKVKR|DC 0.256 .
PVX_094690 299 RDCSGVK|RP 0.061 .
PVX_094690 300 DCSGVKR|PE 0.183 .
PVX_094690 316 SDNVGIR|KG 0.079 .
PVX_094690 317 DNVGIRK|GK 0.079 .
PVX_094690 319 VGIRKGK|KR 0.117 .
PVX_094690 320 GIRKGKK|RK 0.096 .
PVX_094690 321 IRKGKKR|KV 0.365 .
PVX_094690 322 RKGKKRK|VI 0.094 .
____________________________^_________________
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Fasta :-
>PVX_094690
AGGTATTAATGGATGAAATATTTACCCGATTAATTTAAAACGTAATTGTAACAAACATCT
GCGTGATGAACTTGGCAAATAAGAACATTTGTTCCTGTTTTTGTTTTATTTTGCAAAATT
TGAAGAAGCAAAAAGAATGACAAACTGCCTTCACAACGCTTCCCTAAGTCATGAACATTA
AAAATTTGGATGATGTAAAATACAGAATTCATAAAATTAAAGTTTTAAACGAAAATGATA
AGAAGGCAAAGGCAGTGTTGACCCGGGCCGCCGACCAGGTGATGCCAATTATGAAGAAGA
TGCGCTTTTCGGTTGAGTTACTGTCCGAGTTTTTACCTCGGAGCCCAAAATTGCTAGGGC
TAAACATAGCGACTAAATCTGAAATTAAGATACGTATGAGGAAAAAAAGGGGAGGGGAGT
TATTTCACTTCAACGACATCATGGGGACGCTGCTGCACGAGCTGGCGCACATAGTGCACA
GCGGACATGACAGGTCATTTTACGAACTGTTAGACAAGCTAGTATTGGAGTATAATCAAC
TGTACACCTTTGGAAAACTGGAAAATCAAATCAGTGGAGGGAAAAAAACAGGAGGAACTG
ATTTCCGCATATGTAAGGGCAGCCCCAAATTAATGGCAGCACAGGCAGCTGAAATGAGGC
TACTTAATAATTTTATGAATAAAGATGGGGAAATATTAAATATATCCCTTGGAAGTTGCT
TAACGCCAGAACAGTATGATAATTTATTTAAAAATCGAAAAGAACGTGATGATAAAATTT
GTTCCATTTCGAATGATATCATTGTGATCGACCCGTCGATGGATTCGACTAGCCATGAAA
ATGGTGAAAGTGCAGAAACCTCGCAGAACACAAAAAATAATTTTAAACGATCAAATTCGT
TGCAGGGAAGGAATAAAGATGTTTTCACTTTGAATGCGGATCGTGTAAAGGAGGAGGAAC
AGACACATGTGCCTGCGCAGGATGTGTGTAGGAAATCGTCCAAGATACCAGGAGGCAGCG
ACTGCGTGCACGTTTTGAAGGTCAAACGAGATTGCAGCGGTGTGAAACGTCCTGAAAATG
AAAATGGCTCGACCGCGTCTGATAACGTGGGTATTAGGAAGGGCAAAAAGAGAAAAGTTA
TCATTCTCGATTAG
- Download Fasta
- title: Zn binding site
- coordinates: H96,H100,H106
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| ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
| PVX_094690 | 276 S | VCRKSSKIP | 0.991 | unsp | PVX_094690 | 276 S | VCRKSSKIP | 0.991 | unsp | PVX_094690 | 276 S | VCRKSSKIP | 0.991 | unsp | PVX_094690 | 47 S | KMRFSVELL | 0.991 | unsp | PVX_094690 | 221 S | MDSTSHENG | 0.997 | unsp |