PVX_095340 | 26S proteasome regulatory subunit p27, putative

UniProt_ID: A5K7P8

Computed_GO_Component_IDs: GO:0005838
Computed_GO_Components: proteasome regulatory particle
Computed_GO_Function_IDs: GO:0005515
Computed_GO_Functions: protein binding
Computed_GO_Process_IDs: GO:0006511
Computed_GO_Processes: ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PVX_095340	OTHER	0.999979	0.000003	0.000018

No Results

Fasta :-
>PVX_095340 MNLDEFNELVEQRNRIEREIQENVNFLEAPENKGVGLHGKLVDEEGFPRNDIDIYSIRVA RNKVICLKNDYLNVSKRIEEYLHKVHTSHPVIRVQRSKAKKEEGDDPNESPPESCTQDYD ESAPGYELLIEEAKRSTFAMIDELVENSPSHKAGLRINDYIIQFGDVQKKKKKNEENEKE DADIFNRIAAYMRNNPTRIKVKILREGKIFFYFVFPNRTPNGLYIGCHLTPISVGGGSV
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_095340.fa Sequence name : PVX_095340 Sequence length : 239 VALUES OF COMPUTED PARAMETERS Coef20 : 3.615 CoefTot : -0.012 ChDiff : -5 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.265 1.029 0.219 0.528 MesoH : -1.925 -0.378 -0.737 -0.026 MuHd_075 : 29.116 14.824 6.518 5.765 MuHd_095 : 16.226 10.025 3.381 3.643 MuHd_100 : 30.981 18.645 7.677 6.296 MuHd_105 : 41.765 26.107 11.418 8.155 Hmax_075 : -17.412 -1.867 -6.649 -0.569 Hmax_095 : -17.938 -1.750 -6.531 -0.090 Hmax_100 : -13.100 3.800 -4.437 0.780 Hmax_105 : -2.100 11.100 -1.372 2.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7961 0.2039 DFMC : 0.8416 0.1584

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 239 PVX_095340 MNLDEFNELVEQRNRIEREIQENVNFLEAPENKGVGLHGKLVDEEGFPRNDIDIYSIRVARNKVICLKNDYLNVSKRIEE 80 YLHKVHTSHPVIRVQRSKAKKEEGDDPNESPPESCTQDYDESAPGYELLIEEAKRSTFAMIDELVENSPSHKAGLRINDY 160 IIQFGDVQKKKKKNEENEKEDADIFNRIAAYMRNNPTRIKVKILREGKIFFYFVFPNRTPNGLYIGCHLTPISVGGGSV 240 ................................................................................ 80 ................................................................................ 160 ............................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

Fasta :-
>PVX_095340 ACATATGAACCGCTTAACATGGAGGAGTATACTTTTGCGAGCGAGTGGTAGCTACACGGT TAGTGTTTTTTTTTCTCCTTTTTTTTCCTTATTTTCTCTCCCGTGAGAGACCCAACTCGC AGCGCAGTTCCGCGCAGGCATCTACCGACTGCGTCCGAGGGTGAATGCCTCCGTTTGTTG GCTGGCCGATTGGTGAACGCGTTGTCCCTGCAGTGTCACCACAGCGTTGCCGCCACGCCG AATTGAGGCTACACCGCGCCGCCACCACACCGCGCTACCGCGTTACTGCGCTACCGCTAT ACCGCTCCACCGCCACTCTCCGCAAAATGAACCTGGACGAGTTCAACGAGCTGGTGGAGC AGAGGAACCGAATCGAGCGGGAAATCCAGGAGAACGTGAACTTCCTGGAGGCCCCAGAAA ACAAAGGCGTGGGCTTGCACGGCAAGCTGGTAGATGAAGAAGGATTCCCCAGAAACGACA TTGACATATATAGCATCCGAGTGGCCAGGAACAAAGTCATCTGCTTAAAAAACGATTACC TAAATGTGAGCAAAAGAATAGAGGAGTACCTCCACAAGGTTCACACGTCCCACCCTGTCA TACGAGTACAGAGGAGTAAGGCGAAGAAGGAAGAAGGAGATGACCCAAATGAATCTCCCC CAGAGAGTTGCACACAAGATTATGATGAGTCAGCACCTGGTTATGAACTCCTAATAGAAG AAGCGAAAAGAAGTACCTTTGCGATGATCGATGAGCTGGTGGAGAATTCCCCTTCACATA AGGCAGGGCTACGCATTAATGATTATATAATTCAATTTGGGGATGTACAAAAAAAAAAAA AAAAAAATGAAGAAAATGAAAAGGAAGATGCAGACATTTTCAACAGAATTGCAGCTTACA TGCGTAACAATCCCACCAGAATTAAAGTCAAAATTTTGAGAGAGGGGAAGATTTTTTTTT ACTTTGTTTTTCCAAATAGGACTCCCAATGGGTTATACATTGGATGTCACCTGACGCCGA TCAGCGTGGGTGGGGGTAGTGTGTAG
Download Fasta

Fasta :-

MNLDEFNELVEQRNRIEREIQENVNFLEAPENKGVGLHGKLVDEEGFPRNDIDIYSIRVA RNKVICLKNDYLNVSKRIEEYLHKVHTSHPVIRVQRSKAKKEEGDDPNESPPESCTQDYD ESAPGYELLIEEAKRSTFAMIDELVENSPSHKAGLRINDYIIQFGDVQKKKKKNEENEKE DADIFNRIAAYMRNNPTRIKVKILREGKIFFYFVFPNRTPNGLYIGCHLTPISVGGGSV

HtrA-like serine proteases

No Results

	ID	Site	Position	Gscore	Iscore
	PVX_095340	T	116	0.524	0.085

	ID	Site	Position	Gscore	Iscore
	PVX_095340	T	116	0.524	0.085

	ID	Site	Peptide	Score	Method
	PVX_095340	110 S	DPNESPPES	0.995	unsp

PVX_095340

PVX_095340 | 26S proteasome regulatory subunit p27, putative

ID's

UniProt_ID: A5K7P8

GEO Functions

Computed_GO_Component_IDs: GO:0005838

Computed_GO_Components: proteasome regulatory particle

Computed_GO_Function_IDs: GO:0005515

Computed_GO_Functions: protein binding

Computed_GO_Process_IDs: GO:0006511

Computed_GO_Processes: ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

HtrA-like serine proteases

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India