PVX_095380 | proteasome subunit alpha type-3, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_095380OTHER0.9997050.0002460.000049
No Results

  • Fasta :-

    >PVX_095380 MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINSNNTALSLECKDGLLTCCVNSNLLKNKM IKHSSYSRIHHINNNVIVTYAGLDGDARNIIDRAKYEANSYYLNFHTNIPLHILANRVSL YLHSFTLYWHLRPFASSIILASFDEKEKGEIYCVEPNGACYKYSGVVIGKNKEMFKTEIE KRNYKDVDVKEALVDIYKIILTSDDHMNKNNLPHLVNFSWVCKDSSYEYQVVDSETLNEA MRVAVESVEQLNQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_095380.fa Sequence name : PVX_095380 Sequence length : 253 VALUES OF COMPUTED PARAMETERS Coef20 : 3.707 CoefTot : -0.141 ChDiff : -4 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.824 0.929 -0.019 0.448 MesoH : -0.680 0.147 -0.432 0.200 MuHd_075 : 23.497 12.390 4.947 3.001 MuHd_095 : 9.262 6.029 2.442 2.046 MuHd_100 : 4.187 5.142 0.585 1.413 MuHd_105 : 5.257 2.255 1.425 0.842 Hmax_075 : 15.517 10.267 1.459 3.885 Hmax_095 : 13.000 9.800 1.586 4.440 Hmax_100 : 13.000 9.800 1.283 3.940 Hmax_105 : 10.033 5.250 1.204 3.768 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9114 0.0886 DFMC : 0.8578 0.1422
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 253 PVX_095380 MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINSNNTALSLECKDGLLTCCVNSNLLKNKMIKHSSYSRIHHINNNVIVTY 80 AGLDGDARNIIDRAKYEANSYYLNFHTNIPLHILANRVSLYLHSFTLYWHLRPFASSIILASFDEKEKGEIYCVEPNGAC 160 YKYSGVVIGKNKEMFKTEIEKRNYKDVDVKEALVDIYKIILTSDDHMNKNNLPHLVNFSWVCKDSSYEYQVVDSETLNEA 240 MRVAVESVEQLNQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_095380 20 TFSPDGR|LY 0.091 . PVX_095380 29 QVEYIYK|AI 0.063 . PVX_095380 43 ALSLECK|DG 0.060 . PVX_095380 57 VNSNLLK|NK 0.065 . PVX_095380 59 SNLLKNK|MI 0.070 . PVX_095380 62 LKNKMIK|HS 0.086 . PVX_095380 68 KHSSYSR|IH 0.091 . PVX_095380 88 GLDGDAR|NI 0.084 . PVX_095380 93 ARNIIDR|AK 0.108 . PVX_095380 95 NIIDRAK|YE 0.062 . PVX_095380 117 LHILANR|VS 0.064 . PVX_095380 132 TLYWHLR|PF 0.097 . PVX_095380 146 LASFDEK|EK 0.083 . PVX_095380 148 SFDEKEK|GE 0.057 . PVX_095380 162 PNGACYK|YS 0.084 . PVX_095380 170 SGVVIGK|NK 0.064 . PVX_095380 172 VVIGKNK|EM 0.064 . PVX_095380 176 KNKEMFK|TE 0.063 . PVX_095380 181 FKTEIEK|RN 0.058 . PVX_095380 182 KTEIEKR|NY 0.169 . PVX_095380 185 IEKRNYK|DV 0.381 . PVX_095380 190 YKDVDVK|EA 0.060 . PVX_095380 198 ALVDIYK|II 0.066 . PVX_095380 209 SDDHMNK|NN 0.062 . PVX_095380 223 NFSWVCK|DS 0.095 . PVX_095380 242 TLNEAMR|VA 0.107 . ____________________________^_________________

  • Fasta :-

    >PVX_095380 GACCGAACAATTCGCGAAGAAGCGAGCCGTCGCGAGAGATTGCCAACCCAGCACACGCAG AGAAGCCACCGTGGAGCTTTTCCTTCGCAAGTTGGAAGGCAAACAGTTACAGAGGCGAAA GGAGCTAACGAAGTGAAAGGAGTCACAGAAGCAAAAGGAGTGAGCATACAGCAGCGTTCC CCCGCACGCTCGTACTTTCGCTTGTCACTTAGAAACGCTCAGAAGCGGCTTCTTCAGAAT TACCAGCCCACACGTTAGCCGGGTAGGCGCTTCGTTCCCCCGCCCCTCATGCCCTCGCCG CTTCCCCCTTCTTTGCATTGTACAGAAGAGATAAAGAGCCCCTGTGCCCAGATCGGCCCC TGGTCCCCGTTTGAGGAACTCCCAGTTTGAAAGGTCCCTCGTTTGAGGAGCCCCTCGTCG AAGGAGCACCCTTTTTGGAAGCCCCCCGTTTGAGCACCCACACCGATGGCAGGGCTCAGC GCGGGGTACGACCTATCCGTCTCGACGTTCTCCCCAGACGGGAGGCTGTACCAGGTGGAA TACATTTACAAGGCCATCAACAGCAATAACACGGCCCTGAGCCTGGAGTGCAAAGATGGG CTGCTCACCTGTTGCGTAAATTCAAATTTGCTTAAGAACAAAATGATAAAGCACAGTAGC TACAGTAGAATCCACCACATTAATAATAACGTGATCGTCACCTATGCTGGGCTCGATGGA GATGCCAGAAATATAATTGATCGAGCGAAATATGAAGCGAACAGTTACTACTTGAATTTC CACACGAATATCCCTCTGCACATTTTGGCCAACCGCGTTTCTCTTTACCTGCACTCGTTT ACGCTGTACTGGCACTTGCGCCCCTTTGCCTCCTCCATCATACTGGCGTCCTTCGACGAG AAGGAGAAAGGCGAAATCTACTGCGTGGAGCCGAACGGAGCCTGCTACAAATACAGCGGA GTAGTCATCGGGAAGAACAAGGAAATGTTTAAAACTGAAATTGAAAAGAGAAACTACAAA GACGTGGACGTGAAGGAAGCCCTCGTGGATATTTATAAAATAATTTTAACAAGTGACGAC CACATGAATAAGAACAACTTGCCTCACCTGGTTAACTTCTCTTGGGTGTGCAAAGATTCT TCTTATGAATACCAGGTGGTTGATTCGGAGACGCTGAACGAGGCCATGCGCGTGGCCGTG GAGTCGGTGGAGCAGTTGAACCAGTAG
  • Download Fasta

  • Fasta :-

    MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINSNNTALSLECKDGLLTCCVNSNLLKNKM IKHSSYSRIHHINNNVIVTYAGLDGDARNIIDRAKYEANSYYLNFHTNIPLHILANRVSL YLHSFTLYWHLRPFASSIILASFDEKEKGEIYCVEPNGACYKYSGVVIGKNKEMFKTEIE KRNYKDVDVKEALVDIYKIILTSDDHMNKNNLPHLVNFSWVCKDSSYEYQVVDSETLNEA MRVAVESVEQLNQ

  • title: active site
  • coordinates: N35,S53,L55,R68
No Results
No Results
No Results
PVX_095380      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India