PVX_096960 | PST-A protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_096960OTHER0.9998640.0000920.000044
No Results

  • Fasta :-

    >PVX_096960 MTKTQENSEALRTNTLNLDGNPKIGTFFNKDGLSLRTYEWGVENPRGIIILIHGIKSHVR LSFLKPNVEIVSNDKAILIDGENYYLYKGSWVEEFNRNGYSVHGMDLQGHGLSEGWENLK AHIKEFDDYVYDVVQHIAIILKHFNSKGKERGTLPNKEHSPNGKNLPIYFIGYSLGGNVA LRILQMMEDSKDEIVRSINLKGCILLAPVILYKELAKPDSFAFKFVCLPVSKMLCKIIPR FQLKSEPAYQSFPFVIDIGKYDALRYKGGITIQFGYEILRSMHILRSGVNRISKEVPLLF IHSRRDSICYYDYVLSFFERLEVRNKEMYTLEHMDHALTKEPGNEEILQKIVDWIGALPV G
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_096960.fa Sequence name : PVX_096960 Sequence length : 361 VALUES OF COMPUTED PARAMETERS Coef20 : 3.719 CoefTot : -0.268 ChDiff : 2 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.876 1.612 0.066 0.551 MesoH : -0.551 0.642 -0.313 0.259 MuHd_075 : 17.238 10.667 4.411 4.275 MuHd_095 : 11.937 8.254 4.471 1.368 MuHd_100 : 19.778 11.054 5.803 2.533 MuHd_105 : 22.992 10.479 5.545 3.183 Hmax_075 : -3.850 -0.233 -3.865 0.840 Hmax_095 : -0.300 2.800 -1.652 0.060 Hmax_100 : 7.200 3.800 -0.891 1.780 Hmax_105 : 2.100 1.000 -2.519 1.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9759 0.0241 DFMC : 0.9499 0.0501
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 361 PVX_096960 MTKTQENSEALRTNTLNLDGNPKIGTFFNKDGLSLRTYEWGVENPRGIIILIHGIKSHVRLSFLKPNVEIVSNDKAILID 80 GENYYLYKGSWVEEFNRNGYSVHGMDLQGHGLSEGWENLKAHIKEFDDYVYDVVQHIAIILKHFNSKGKERGTLPNKEHS 160 PNGKNLPIYFIGYSLGGNVALRILQMMEDSKDEIVRSINLKGCILLAPVILYKELAKPDSFAFKFVCLPVSKMLCKIIPR 240 FQLKSEPAYQSFPFVIDIGKYDALRYKGGITIQFGYEILRSMHILRSGVNRISKEVPLLFIHSRRDSICYYDYVLSFFER 320 LEVRNKEMYTLEHMDHALTKEPGNEEILQKIVDWIGALPVG 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_096960 3 ----MTK|TQ 0.066 . PVX_096960 12 ENSEALR|TN 0.089 . PVX_096960 23 NLDGNPK|IG 0.056 . PVX_096960 30 IGTFFNK|DG 0.066 . PVX_096960 36 KDGLSLR|TY 0.103 . PVX_096960 46 WGVENPR|GI 0.097 . PVX_096960 56 ILIHGIK|SH 0.061 . PVX_096960 60 GIKSHVR|LS 0.086 . PVX_096960 65 VRLSFLK|PN 0.062 . PVX_096960 75 EIVSNDK|AI 0.058 . PVX_096960 88 ENYYLYK|GS 0.073 . PVX_096960 97 WVEEFNR|NG 0.077 . PVX_096960 120 EGWENLK|AH 0.060 . PVX_096960 124 NLKAHIK|EF 0.072 . PVX_096960 142 HIAIILK|HF 0.065 . PVX_096960 147 LKHFNSK|GK 0.077 . PVX_096960 149 HFNSKGK|ER 0.075 . PVX_096960 151 NSKGKER|GT 0.117 . PVX_096960 157 RGTLPNK|EH 0.064 . PVX_096960 164 EHSPNGK|NL 0.073 . PVX_096960 182 GGNVALR|IL 0.113 . PVX_096960 191 QMMEDSK|DE 0.059 . PVX_096960 196 SKDEIVR|SI 0.142 . PVX_096960 201 VRSINLK|GC 0.070 . PVX_096960 213 APVILYK|EL 0.059 . PVX_096960 217 LYKELAK|PD 0.068 . PVX_096960 224 PDSFAFK|FV 0.092 . PVX_096960 232 VCLPVSK|ML 0.069 . PVX_096960 236 VSKMLCK|II 0.063 . PVX_096960 240 LCKIIPR|FQ 0.102 . PVX_096960 244 IPRFQLK|SE 0.088 . PVX_096960 260 FVIDIGK|YD 0.057 . PVX_096960 265 GKYDALR|YK 0.128 . PVX_096960 267 YDALRYK|GG 0.074 . PVX_096960 280 FGYEILR|SM 0.105 . PVX_096960 286 RSMHILR|SG 0.107 . PVX_096960 291 LRSGVNR|IS 0.147 . PVX_096960 294 GVNRISK|EV 0.148 . PVX_096960 304 LLFIHSR|RD 0.091 . PVX_096960 305 LFIHSRR|DS 0.217 . PVX_096960 320 VLSFFER|LE 0.083 . PVX_096960 324 FERLEVR|NK 0.081 . PVX_096960 326 RLEVRNK|EM 0.068 . PVX_096960 340 MDHALTK|EP 0.080 . PVX_096960 350 NEEILQK|IV 0.091 . ____________________________^_________________

  • Fasta :-

    >PVX_096960 ATGACGAAGACGCAGGAAAACAGTGAAGCACTTAGAACCAACACTTTGAATCTCGATGGG AATCCGAAAATAGGTACCTTCTTTAACAAAGATGGGTTGTCATTGCGGACGTACGAATGG GGGGTAGAAAACCCTAGGGGCATTATCATATTAATTCACGGGATAAAGTCGCACGTAAGA TTAAGCTTTTTAAAACCTAACGTGGAAATAGTGAGTAACGATAAGGCTATACTAATAGAT GGGGAAAATTACTATCTGTATAAGGGCAGTTGGGTAGAAGAGTTTAACAGAAATGGGTAT TCAGTGCACGGCATGGATTTACAGGGTCACGGATTATCAGAGGGATGGGAGAATTTAAAA GCCCACATAAAAGAGTTCGACGATTATGTGTATGATGTGGTGCAGCACATTGCTATCATT TTAAAGCATTTCAACTCGAAGGGTAAAGAAAGAGGTACGCTGCCTAACAAGGAACACTCC CCAAATGGCAAAAACCTTCCCATATATTTCATTGGGTATTCACTGGGGGGGAACGTAGCA TTGAGAATTTTACAAATGATGGAAGATTCAAAGGATGAAATCGTTAGGAGTATTAATTTG AAGGGGTGCATATTGTTAGCCCCGGTGATTCTTTACAAGGAACTAGCTAAGCCAGATTCC TTTGCCTTTAAATTTGTTTGCTTACCAGTGTCGAAAATGCTCTGCAAAATAATTCCTAGG TTTCAACTTAAGAGCGAACCCGCCTATCAATCCTTTCCCTTCGTTATAGATATTGGGAAA TATGACGCCCTGAGATATAAAGGTGGAATAACAATACAATTTGGGTATGAGATTTTAAGA TCTATGCATATTTTGCGCAGCGGTGTAAACCGCATTTCGAAAGAAGTTCCGCTACTCTTT ATTCACTCCAGGAGGGATAGCATTTGTTACTATGATTACGTTTTGTCATTCTTTGAAAGG TTAGAAGTGAGGAATAAGGAGATGTACACGCTTGAACATATGGACCACGCATTGACGAAG GAGCCGGGGAACGAGGAAATTCTGCAGAAGATTGTCGACTGGATAGGGGCTTTGCCAGTG GGGTAG
  • Download Fasta

  • Fasta :-

    MTKTQENSEALRTNTLNLDGNPKIGTFFNKDGLSLRTYEWGVENPRGIIILIHGIKSHVR LSFLKPNVEIVSNDKAILIDGENYYLYKGSWVEEFNRNGYSVHGMDLQGHGLSEGWENLK AHIKEFDDYVYDVVQHIAIILKHFNSKGKERGTLPNKEHSPNGKNLPIYFIGYSLGGNVA LRILQMMEDSKDEIVRSINLKGCILLAPVILYKELAKPDSFAFKFVCLPVSKMLCKIIPR FQLKSEPAYQSFPFVIDIGKYDALRYKGGITIQFGYEILRSMHILRSGVNRISKEVPLLF IHSRRDSICYYDYVLSFFERLEVRNKEMYTLEHMDHALTKEPGNEEILQKIVDWIGALPV G

    No Results
IDSitePositionGscoreIscore
PVX_096960T20.5010.067
IDSitePositionGscoreIscore
PVX_096960T20.5010.067
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_096960249 YSEPAYQSFP0.991unspPVX_096960307 SSRRDSICYY0.993unsp
PVX_096960      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India