_IDPredictionOTHERSPmTPCS_Position
PVX_097905OTHER0.9999960.0000030.000001
No Results
  • Fasta :-

    >PVX_097905 MLSDYRVNKGALPPSEKLAKNADSSDRGEGPSGNNEDSDEESDLSVSVGRGGGTRPRGDK AGPAAAATGGTAATSGTATTRGTAAISATALSAAPRGSAASHGRKGPNDVKILVTSDEPL HTLPSGAVGRRAPLNPFSSPMLGKYRRKNRNAKMKVKDPRLNNNPLVGRLIVCISSTAIL FWVFFAEMIFNYNTFNGRCISKVLYPIYTETVVKKREPFFVFLGYGACEYNLEESAFDRH FIGTSASDKGWPTNKVEENPDGRGESSWDSVNTRVYNQLGGLNTNYIRNYGELYRLFWSV YLHGGFMHIIFNVICQIQILWMIEPDWGFLRTMMLFFTSGVTGNLLSAVCDPCGVTIGSS GALYGLIGALFTYYIEYWKTIPRPCCVLIFMVIVIIFGIFIGMFGYTDNYAHMGGCLGGI LYGFATITTVSAADKCTLGERMLTSPPFSWFLSSETKELINAKAREKKIRGENYRKKQIA NKVHKEDAFHVVMSLMKNRINEDGRPPCKMKLREWVVRITAASALIILWIVLFVYLLNET AYKSYTPMGQIKFTGVHTCFCCEVAKEKFPFISVANFYWCFTNEEATKYYCGK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_097905.fa Sequence name : PVX_097905 Sequence length : 593 VALUES OF COMPUTED PARAMETERS Coef20 : 3.486 CoefTot : 0.234 ChDiff : 16 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.953 3.429 0.812 1.102 MesoH : 1.180 1.349 0.194 0.572 MuHd_075 : 6.664 12.914 2.711 1.874 MuHd_095 : 22.371 13.043 7.612 3.778 MuHd_100 : 21.763 11.934 6.108 4.461 MuHd_105 : 22.205 12.814 4.961 5.018 Hmax_075 : -1.925 5.400 -2.594 1.803 Hmax_095 : 9.000 6.200 1.082 3.060 Hmax_100 : -0.400 3.900 -1.102 2.340 Hmax_105 : -2.800 3.100 -2.725 1.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9906 0.0094 DFMC : 0.9950 0.0050
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 593 PVX_097905 MLSDYRVNKGALPPSEKLAKNADSSDRGEGPSGNNEDSDEESDLSVSVGRGGGTRPRGDKAGPAAAATGGTAATSGTATT 80 RGTAAISATALSAAPRGSAASHGRKGPNDVKILVTSDEPLHTLPSGAVGRRAPLNPFSSPMLGKYRRKNRNAKMKVKDPR 160 LNNNPLVGRLIVCISSTAILFWVFFAEMIFNYNTFNGRCISKVLYPIYTETVVKKREPFFVFLGYGACEYNLEESAFDRH 240 FIGTSASDKGWPTNKVEENPDGRGESSWDSVNTRVYNQLGGLNTNYIRNYGELYRLFWSVYLHGGFMHIIFNVICQIQIL 320 WMIEPDWGFLRTMMLFFTSGVTGNLLSAVCDPCGVTIGSSGALYGLIGALFTYYIEYWKTIPRPCCVLIFMVIVIIFGIF 400 IGMFGYTDNYAHMGGCLGGILYGFATITTVSAADKCTLGERMLTSPPFSWFLSSETKELINAKAREKKIRGENYRKKQIA 480 NKVHKEDAFHVVMSLMKNRINEDGRPPCKMKLREWVVRITAASALIILWIVLFVYLLNETAYKSYTPMGQIKFTGVHTCF 560 CCEVAKEKFPFISVANFYWCFTNEEATKYYCGK 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_097905 6 -MLSDYR|VN 0.070 . PVX_097905 9 SDYRVNK|GA 0.134 . PVX_097905 17 ALPPSEK|LA 0.061 . PVX_097905 20 PSEKLAK|NA 0.080 . PVX_097905 27 NADSSDR|GE 0.120 . PVX_097905 50 LSVSVGR|GG 0.115 . PVX_097905 55 GRGGGTR|PR 0.101 . PVX_097905 57 GGGTRPR|GD 0.115 . PVX_097905 60 TRPRGDK|AG 0.134 . PVX_097905 81 SGTATTR|GT 0.104 . PVX_097905 96 ALSAAPR|GS 0.121 . PVX_097905 104 SAASHGR|KG 0.084 . PVX_097905 105 AASHGRK|GP 0.096 . PVX_097905 111 KGPNDVK|IL 0.057 . PVX_097905 130 PSGAVGR|RA 0.094 . PVX_097905 131 SGAVGRR|AP 0.115 . PVX_097905 144 SSPMLGK|YR 0.075 . PVX_097905 146 PMLGKYR|RK 0.078 . PVX_097905 147 MLGKYRR|KN 0.138 . PVX_097905 148 LGKYRRK|NR 0.082 . PVX_097905 150 KYRRKNR|NA 0.436 . PVX_097905 153 RKNRNAK|MK 0.161 . PVX_097905 155 NRNAKMK|VK 0.095 . PVX_097905 157 NAKMKVK|DP 0.068 . PVX_097905 160 MKVKDPR|LN 0.100 . PVX_097905 169 NNPLVGR|LI 0.076 . PVX_097905 198 YNTFNGR|CI 0.110 . PVX_097905 202 NGRCISK|VL 0.066 . PVX_097905 214 YTETVVK|KR 0.059 . PVX_097905 215 TETVVKK|RE 0.079 . PVX_097905 216 ETVVKKR|EP 0.158 . PVX_097905 239 EESAFDR|HF 0.100 . PVX_097905 249 GTSASDK|GW 0.077 . PVX_097905 255 KGWPTNK|VE 0.056 . PVX_097905 263 EENPDGR|GE 0.083 . PVX_097905 274 WDSVNTR|VY 0.106 . PVX_097905 288 LNTNYIR|NY 0.084 . PVX_097905 295 NYGELYR|LF 0.076 . PVX_097905 331 PDWGFLR|TM 0.074 . PVX_097905 379 YYIEYWK|TI 0.054 . PVX_097905 383 YWKTIPR|PC 0.088 . PVX_097905 435 TVSAADK|CT 0.076 . PVX_097905 441 KCTLGER|ML 0.071 . PVX_097905 457 FLSSETK|EL 0.068 . PVX_097905 463 KELINAK|AR 0.074 . PVX_097905 465 LINAKAR|EK 0.101 . PVX_097905 467 NAKAREK|KI 0.063 . PVX_097905 468 AKAREKK|IR 0.385 . PVX_097905 470 AREKKIR|GE 0.133 . PVX_097905 475 IRGENYR|KK 0.104 . PVX_097905 476 RGENYRK|KQ 0.072 . PVX_097905 477 GENYRKK|QI 0.159 . PVX_097905 482 KKQIANK|VH 0.059 . PVX_097905 485 IANKVHK|ED 0.070 . PVX_097905 497 VVMSLMK|NR 0.055 . PVX_097905 499 MSLMKNR|IN 0.139 . PVX_097905 505 RINEDGR|PP 0.088 . PVX_097905 509 DGRPPCK|MK 0.058 . PVX_097905 511 RPPCKMK|LR 0.077 . PVX_097905 513 PCKMKLR|EW 0.090 . PVX_097905 518 LREWVVR|IT 0.112 . PVX_097905 543 LNETAYK|SY 0.083 . PVX_097905 552 TPMGQIK|FT 0.098 . PVX_097905 566 FCCEVAK|EK 0.066 . PVX_097905 568 CEVAKEK|FP 0.070 . PVX_097905 588 TNEEATK|YY 0.074 . PVX_097905 593 TKYYCGK|-- 0.080 . ____________________________^_________________
  • Fasta :-

    >PVX_097905 ATGCTGAGTGATTACCGAGTGAACAAGGGGGCGCTCCCGCCAAGCGAGAAGCTGGCGAAG AATGCGGATTCGTCCGACCGGGGGGAGGGGCCCAGTGGGAACAACGAAGACAGCGACGAG GAGAGCGACCTGAGCGTGAGCGTGGGACGGGGCGGCGGCACTCGACCGAGAGGGGACAAA GCGGGGCCGGCGGCGGCGGCAACTGGAGGAACCGCCGCTACCAGTGGAACCGCCACTACC CGTGGAACCGCCGCTATAAGCGCAACCGCCTTAAGCGCCGCCCCCCGCGGGAGCGCCGCT TCGCATGGAAGGAAAGGCCCCAACGACGTAAAAATTTTAGTGACGAGCGATGAGCCCCTG CACACGCTGCCATCAGGTGCCGTGGGGAGGAGGGCTCCGCTGAACCCGTTTTCATCCCCC ATGCTTGGAAAGTACAGGAGAAAAAACAGAAACGCAAAAATGAAGGTGAAAGACCCAAGA CTTAACAATAACCCATTGGTAGGAAGGTTAATCGTGTGCATATCCTCCACGGCCATCCTC TTCTGGGTCTTCTTCGCCGAAATGATTTTCAATTACAATACATTTAATGGCAGATGTATA TCGAAGGTACTCTACCCAATCTACACAGAAACGGTGGTGAAGAAGAGAGAGCCTTTTTTT GTGTTCCTGGGTTATGGAGCATGCGAATATAACTTAGAAGAGTCTGCCTTCGATAGGCAC TTCATCGGAACGAGTGCATCCGACAAAGGATGGCCCACAAATAAAGTTGAAGAAAATCCA GATGGAAGAGGAGAGTCAAGTTGGGACAGTGTAAACACACGTGTGTATAATCAGTTAGGA GGACTTAACACAAATTACATACGAAATTATGGAGAGTTATATCGTCTTTTTTGGTCAGTC TATCTACATGGAGGGTTCATGCACATCATATTTAATGTAATCTGCCAGATACAAATCCTC TGGATGATTGAACCCGACTGGGGGTTTCTACGAACGATGATGCTGTTTTTTACATCTGGG GTGACAGGCAATTTGTTATCTGCCGTATGTGACCCATGTGGTGTAACTATCGGGTCGTCA GGTGCACTATATGGATTGATAGGAGCTCTCTTCACCTATTACATAGAATACTGGAAGACC ATTCCGAGACCCTGCTGCGTCTTGATCTTCATGGTTATTGTAATCATTTTTGGGATTTTC ATTGGTATGTTTGGATACACAGATAATTATGCCCACATGGGTGGTTGCTTGGGGGGCATC CTCTATGGCTTCGCCACCATTACGACTGTCTCCGCAGCGGATAAGTGCACCCTGGGGGAG CGCATGCTCACGTCTCCTCCCTTCTCCTGGTTCCTGTCTTCCGAAACGAAGGAACTCATT AACGCAAAAGCAAGGGAGAAAAAAATAAGAGGAGAAAATTATAGGAAAAAGCAAATTGCT AATAAGGTACATAAGGAGGACGCTTTCCACGTTGTGATGTCTCTCATGAAGAACAGAATC AATGAGGACGGAAGACCTCCATGTAAAATGAAACTGCGTGAGTGGGTCGTCCGGATCACT GCCGCGTCGGCGCTCATCATCCTTTGGATAGTGCTGTTCGTCTACCTGCTGAATGAAACC GCCTACAAATCCTACACCCCCATGGGCCAAATCAAGTTCACCGGCGTCCACACCTGCTTC TGCTGCGAGGTCGCCAAGGAGAAGTTCCCCTTCATCAGCGTCGCCAACTTTTACTGGTGC TTCACCAACGAGGAGGCCACCAAGTACTACTGCGGGAAGTGA
  • Download Fasta
  • Fasta :-

    MLSDYRVNKGALPPSEKLAKNADSSDRGEGPSGNNEDSDEESDLSVSVGRGGGTRPRGDK AGPAAAATGGTAATSGTATTRGTAAISATALSAAPRGSAASHGRKGPNDVKILVTSDEPL HTLPSGAVGRRAPLNPFSSPMLGKYRRKNRNAKMKVKDPRLNNNPLVGRLIVCISSTAIL FWVFFAEMIFNYNTFNGRCISKVLYPIYTETVVKKREPFFVFLGYGACEYNLEESAFDRH FIGTSASDKGWPTNKVEENPDGRGESSWDSVNTRVYNQLGGLNTNYIRNYGELYRLFWSV YLHGGFMHIIFNVICQIQILWMIEPDWGFLRTMMLFFTSGVTGNLLSAVCDPCGVTIGSS GALYGLIGALFTYYIEYWKTIPRPCCVLIFMVIVIIFGIFIGMFGYTDNYAHMGGCLGGI LYGFATITTVSAADKCTLGERMLTSPPFSWFLSSETKELINAKAREKKIRGENYRKKQIA NKVHKEDAFHVVMSLMKNRINEDGRPPCKMKLREWVVRITAASALIILWIVLFVYLLNET AYKSYTPMGQIKFTGVHTCFCCEVAKEKFPFISVANFYWCFTNEEATKYYCGK

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_097905T800.5920.279PVX_097905T770.5880.030PVX_097905T710.5790.038PVX_097905T680.5780.215PVX_097905T830.5690.050PVX_097905T740.5660.306PVX_097905T790.5620.035PVX_097905T890.5390.143
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
PVX_097905T800.5920.279PVX_097905T770.5880.030PVX_097905T710.5790.038PVX_097905T680.5780.215PVX_097905T830.5690.050PVX_097905T740.5660.306PVX_097905T790.5620.035PVX_097905T890.5390.143
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_09790538 SNNEDSDEES0.997unspPVX_097905266 SGRGESSWDS0.994unsp
PVX_097905      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India