PVX_099080 | 26S proteasome regulatory subunit RPN8, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_099080OTHER0.9998790.0000460.000075
No Results

  • Fasta :-

    >PVX_099080 MENDIFEKSKNELERIYLSKHVVVHPIVLLSVVDHYNRIASNTKKRVLGTILGEKIDGVV HLTNSYALPFEEDIKDINIFFVDDHYNENLFNMIRKINTREKIVGWYTTGSNIKPNDIFI NEIFYKYHHAPIFLLVNVHTDQSVFPVNAYVAIEKAISDNKFRKTFIHIPVTIGAFEAED VGVEFLLKELKSVSTSTLATKVGDKLSSLKSLIAKLHEISAYLSDILSGNIEMNIKILYN LQNVFSLLPDTENPELVEAFMVKNNDIMLNVFIGSITRSVIALHNLINNKIENKINAEKK KQLDVSKDAEEDKDRDADKEREKQKKKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_099080.fa Sequence name : PVX_099080 Sequence length : 328 VALUES OF COMPUTED PARAMETERS Coef20 : 3.409 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.071 1.753 0.147 0.548 MesoH : -0.580 0.490 -0.406 0.265 MuHd_075 : 7.935 6.718 3.203 0.610 MuHd_095 : 39.038 22.628 10.375 8.024 MuHd_100 : 33.901 19.747 9.306 6.785 MuHd_105 : 27.321 15.744 7.809 5.056 Hmax_075 : -9.450 5.017 -3.088 2.077 Hmax_095 : 6.825 10.412 0.158 4.445 Hmax_100 : 4.400 10.000 0.045 4.440 Hmax_105 : -3.100 7.800 -2.011 3.440 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9593 0.0407 DFMC : 0.9713 0.0287
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 328 PVX_099080 MENDIFEKSKNELERIYLSKHVVVHPIVLLSVVDHYNRIASNTKKRVLGTILGEKIDGVVHLTNSYALPFEEDIKDINIF 80 FVDDHYNENLFNMIRKINTREKIVGWYTTGSNIKPNDIFINEIFYKYHHAPIFLLVNVHTDQSVFPVNAYVAIEKAISDN 160 KFRKTFIHIPVTIGAFEAEDVGVEFLLKELKSVSTSTLATKVGDKLSSLKSLIAKLHEISAYLSDILSGNIEMNIKILYN 240 LQNVFSLLPDTENPELVEAFMVKNNDIMLNVFIGSITRSVIALHNLINNKIENKINAEKKKQLDVSKDAEEDKDRDADKE 320 REKQKKKN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_099080 8 ENDIFEK|SK 0.080 . PVX_099080 10 DIFEKSK|NE 0.059 . PVX_099080 15 SKNELER|IY 0.103 . PVX_099080 20 ERIYLSK|HV 0.083 . PVX_099080 38 VVDHYNR|IA 0.081 . PVX_099080 44 RIASNTK|KR 0.055 . PVX_099080 45 IASNTKK|RV 0.151 . PVX_099080 46 ASNTKKR|VL 0.429 . PVX_099080 55 GTILGEK|ID 0.061 . PVX_099080 75 PFEEDIK|DI 0.066 . PVX_099080 95 NLFNMIR|KI 0.089 . PVX_099080 96 LFNMIRK|IN 0.084 . PVX_099080 100 IRKINTR|EK 0.105 . PVX_099080 102 KINTREK|IV 0.114 . PVX_099080 114 TTGSNIK|PN 0.068 . PVX_099080 126 INEIFYK|YH 0.072 . PVX_099080 155 AYVAIEK|AI 0.068 . PVX_099080 161 KAISDNK|FR 0.061 . PVX_099080 163 ISDNKFR|KT 0.114 . PVX_099080 164 SDNKFRK|TF 0.129 . PVX_099080 188 GVEFLLK|EL 0.058 . PVX_099080 191 FLLKELK|SV 0.101 . PVX_099080 201 TSTLATK|VG 0.057 . PVX_099080 205 ATKVGDK|LS 0.054 . PVX_099080 210 DKLSSLK|SL 0.088 . PVX_099080 215 LKSLIAK|LH 0.071 . PVX_099080 236 NIEMNIK|IL 0.061 . PVX_099080 263 VEAFMVK|NN 0.073 . PVX_099080 278 FIGSITR|SV 0.151 . PVX_099080 290 HNLINNK|IE 0.060 . PVX_099080 294 NNKIENK|IN 0.062 . PVX_099080 299 NKINAEK|KK 0.055 . PVX_099080 300 KINAEKK|KQ 0.105 . PVX_099080 301 INAEKKK|QL 0.187 . PVX_099080 307 KQLDVSK|DA 0.080 . PVX_099080 313 KDAEEDK|DR 0.073 . PVX_099080 315 AEEDKDR|DA 0.168 . PVX_099080 319 KDRDADK|ER 0.069 . PVX_099080 321 RDADKER|EK 0.105 . PVX_099080 323 ADKEREK|QK 0.062 . PVX_099080 325 KEREKQK|KK 0.072 . PVX_099080 326 EREKQKK|KN 0.132 . PVX_099080 327 REKQKKK|N- 0.110 . ____________________________^_________________

  • Fasta :-

    >PVX_099080 AGGGAGCCTTTCTTGAAGCAGCATTTCGCCTTTTTTCCCTTCCTCCTTTTCTCCTCTTTT TTTTTTTCCCATTTTTGCATTTCCCAGGGGAAAGAAAACGCCTCACCTTTTTTTTTATTT CACGCGCTGAGTACCCCACCGCGCAGTGGCATACGCCCCCTTGGTTAATTCGCTAATTCG CTAATTTGCTAATTCGTTTGTTCTTCATGCACATTTTTGTTCCTTTTTTGTTCCCTTTTT TTGTGCGTGAATATCTTCGCCATTTTTTTTTCGCGCCTAGCGGCCCCTTCGCCTGAGAGG CGTGTAATCCGGAGCAGCTCTCCCCCCCAAGGCTAAGCCCTCGTAGCAGTGTACACCTGT GTGTATGCAACTGGGATTTAGTTGCCGCAGCGGCATTCACCGTTGGGGTGACCTCTCCAT CTGGACTGCTCCTCCACCAGGACGGCTTCGCACCGCACTGGCGCAGCGCCCACCAGATAG AGCCAAGCAAAATGGAAAATGACATCTTCGAGAAGAGCAAAAACGAGTTAGAGAGAATCT ACCTGAGCAAGCATGTCGTGGTGCACCCGATAGTACTCCTCTCAGTGGTGGACCACTACA ACCGAATAGCTAGTAACACCAAGAAGAGAGTGCTCGGCACAATATTAGGAGAAAAAATAG ACGGTGTGGTACACCTCACAAATAGTTACGCCTTGCCATTTGAAGAGGACATAAAAGATA TTAACATTTTTTTTGTGGACGACCATTATAATGAAAATCTCTTCAACATGATACGCAAGA TCAACACGAGAGAGAAGATCGTCGGCTGGTACACCACGGGCTCCAACATTAAACCGAATG ACATTTTCATTAACGAGATATTTTATAAGTACCACCACGCGCCCATCTTCCTCCTCGTCA ATGTGCACACGGACCAGAGCGTCTTCCCCGTGAATGCCTACGTGGCCATTGAGAAGGCTA TCTCGGACAACAAGTTCAGGAAGACCTTCATCCACATCCCCGTCACGATAGGCGCGTTCG AAGCGGAGGACGTCGGAGTGGAGTTCCTGCTGAAGGAGCTGAAGAGCGTGTCGACGTCCA CCCTGGCGACCAAAGTGGGCGACAAGCTCTCCTCCCTCAAAAGCCTCATCGCCAAGCTCC ACGAAATCTCCGCCTACCTAAGTGACATCCTCAGCGGAAACATAGAAATGAACATCAAAA TTCTGTATAACCTCCAAAACGTCTTTAGCCTCCTCCCAGACACAGAGAACCCAGAGCTAG TGGAGGCCTTCATGGTCAAAAATAATGACATCATGTTGAACGTCTTCATTGGGAGCATCA CCCGGTCGGTCATTGCCCTCCACAATTTGATTAACAACAAAATTGAAAATAAAATAAACG CAGAGAAGAAGAAGCAGCTCGACGTCTCCAAGGACGCCGAGGAGGACAAGGATAGAGACG CAGACAAGGAGAGGGAAAAGCAGAAGAAGAAAAACTAG
  • Download Fasta

  • Fasta :-

    MENDIFEKSKNELERIYLSKHVVVHPIVLLSVVDHYNRIASNTKKRVLGTILGEKIDGVV HLTNSYALPFEEDIKDINIFFVDDHYNENLFNMIRKINTREKIVGWYTTGSNIKPNDIFI NEIFYKYHHAPIFLLVNVHTDQSVFPVNAYVAIEKAISDNKFRKTFIHIPVTIGAFEAED VGVEFLLKELKSVSTSTLATKVGDKLSSLKSLIAKLHEISAYLSDILSGNIEMNIKILYN LQNVFSLLPDTENPELVEAFMVKNNDIMLNVFIGSITRSVIALHNLINNKIENKINAEKK KQLDVSKDAEEDKDRDADKEREKQKKKN

    No Results
    No Results
No Results
No Results
No Results
PVX_099080      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India