PVX_099375 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
PVX_099375OTHER0.9972400.0020490.000711
No Results

  • Fasta :-

    >PVX_099375 MNIWLHTYTLDVPFFLKNVRHTGIEAFGSEYTFSMDGITACKPKKSTIGQYCKSYELTFV EITYAQFAEILNALGKIYRPNSYNFVSKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLF GNFKNLALCGYINSMELSRSDKEMYVYALKLSRSIIRRNRSAPGKQRSGLHTGVASSLTS NLTGNLTSNLTGALPSNLPPCLTNGLPPLHFNKPSDDYSNQFCSPSPIYIIPYTPYANDS CVGQNVFYGENTFNGPVNCLPDEAQKGVFPNGQFRTVYSISTSGSFSMA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_099375.fa Sequence name : PVX_099375 Sequence length : 289 VALUES OF COMPUTED PARAMETERS Coef20 : 4.075 CoefTot : -1.256 ChDiff : 7 ZoneTo : 24 KR : 2 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.812 0.906 0.019 0.467 MesoH : -0.074 0.124 -0.284 0.185 MuHd_075 : 24.143 16.926 6.730 4.996 MuHd_095 : 17.374 14.578 7.172 4.748 MuHd_100 : 20.813 18.814 8.389 5.775 MuHd_105 : 25.790 19.900 8.632 6.012 Hmax_075 : 19.600 17.000 3.194 6.592 Hmax_095 : 15.700 13.000 -0.105 6.670 Hmax_100 : 15.700 16.800 2.646 6.670 Hmax_105 : 8.800 21.117 3.537 4.070 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8739 0.1261 DFMC : 0.9039 0.0961
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 289 PVX_099375 MNIWLHTYTLDVPFFLKNVRHTGIEAFGSEYTFSMDGITACKPKKSTIGQYCKSYELTFVEITYAQFAEILNALGKIYRP 80 NSYNFVSKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLFGNFKNLALCGYINSMELSRSDKEMYVYALKLSRSIIRRNR 160 SAPGKQRSGLHTGVASSLTSNLTGNLTSNLTGALPSNLPPCLTNGLPPLHFNKPSDDYSNQFCSPSPIYIIPYTPYANDS 240 CVGQNVFYGENTFNGPVNCLPDEAQKGVFPNGQFRTVYSISTSGSFSMA 320 ................................................................................ 80 ...............................................................................P 160 ................................................................................ 240 ................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_099375 17 DVPFFLK|NV 0.068 . PVX_099375 20 FFLKNVR|HT 0.097 . PVX_099375 42 DGITACK|PK 0.057 . PVX_099375 44 ITACKPK|KS 0.083 . PVX_099375 45 TACKPKK|ST 0.216 . PVX_099375 53 TIGQYCK|SY 0.082 . PVX_099375 76 ILNALGK|IY 0.065 . PVX_099375 79 ALGKIYR|PN 0.096 . PVX_099375 88 SYNFVSK|NC 0.071 . PVX_099375 104 FELLSGK|RL 0.058 . PVX_099375 105 ELLSGKR|LF 0.098 . PVX_099375 115 TFMIYSR|LG 0.070 . PVX_099375 118 IYSRLGK|LF 0.134 . PVX_099375 124 KLFGNFK|NL 0.057 . PVX_099375 139 NSMELSR|SD 0.104 . PVX_099375 142 ELSRSDK|EM 0.131 . PVX_099375 150 MYVYALK|LS 0.057 . PVX_099375 153 YALKLSR|SI 0.104 . PVX_099375 157 LSRSIIR|RN 0.083 . PVX_099375 158 SRSIIRR|NR 0.233 . PVX_099375 160 SIIRRNR|SA 0.591 *ProP* PVX_099375 165 NRSAPGK|QR 0.085 . PVX_099375 167 SAPGKQR|SG 0.119 . PVX_099375 213 PPLHFNK|PS 0.071 . PVX_099375 266 LPDEAQK|GV 0.080 . PVX_099375 275 FPNGQFR|TV 0.136 . ____________________________^_________________

  • Fasta :-

    >PVX_099375 AACAAAAAAATGTTAACCTTTTAGCTGTGAAAAAATCTGAATGATTGGCAAAGTTACCAC GGAAAAGGTGGAAAATAAAAAAAAAAAAAAATCCCCAGTGTGTATATCTTATTTATTTAT TTATTTTTTTTTTTTTTTTTTTCCTTTTTTTCTTAAACCGTTTTAGCAAAATTGTTCCAC CACCTCGATCGCAACTACTTCAGTGGAGAACAGAAAAATGCACAAATTAGGACAGTTAGT TTGGCTGACCGGTATTATGCTTTGCTGCGCTTCCGTTTCCTCTTCTTCTTTTTCTTCCTC TTCCCTTACCGCCTTCACCCGTTCAGCGCCTAATTAGTCGCCACAGCAGCAGAGCGCATG CGTCCACATGCCCGCTTCGACTTAGCCGTAACAGACCAGCGCACACTGCACATATAAATG AATATCTGGCTGCACACCTACACCCTAGACGTTCCCTTCTTTCTGAAAAATGTGCGCCAC ACGGGAATCGAAGCGTTCGGGAGCGAGTACACCTTCTCCATGGACGGAATCACCGCTTGC AAACCGAAGAAGTCGACCATCGGGCAGTACTGCAAGAGCTACGAGCTGACCTTCGTGGAA ATAACCTACGCCCAGTTTGCAGAAATTTTAAATGCCCTGGGAAAGATATACAGACCAAAC AGCTACAACTTCGTGAGCAAAAACTGCAACCACTTCTGCGATGACCTCTTCGAGTTGCTC AGTGGGAAAAGACTCTTTCATACGTTTATGATTTATTCTCGGCTGGGAAAGTTGTTTGGG AATTTTAAGAACCTCGCCTTGTGTGGGTACATCAACTCCATGGAGCTTTCCCGCAGCGAC AAGGAGATGTACGTCTACGCGCTGAAGCTGTCCAGGTCGATCATCCGGCGGAATAGGAGC GCGCCCGGCAAACAGAGGAGTGGGTTGCACACTGGCGTAGCCTCCAGCTTGACGAGCAAT TTGACGGGCAACCTGACGAGCAACCTGACGGGCGCCCTGCCCAGTAACTTGCCCCCCTGC CTCACGAACGGCTTGCCGCCCCTCCATTTCAACAAGCCAAGCGACGACTACTCCAACCAG TTTTGCAGCCCCTCCCCCATATACATCATCCCATATACCCCCTACGCGAATGACTCCTGC GTCGGCCAAAACGTCTTCTACGGGGAGAACACCTTTAACGGCCCTGTGAACTGCCTGCCT GATGAGGCGCAGAAGGGGGTTTTCCCCAACGGCCAGTTCAGAACTGTTTATTCGATTAGC ACGAGTGGCAGCTTTTCGATGGCATAA
  • Download Fasta

  • Fasta :-

    MNIWLHTYTLDVPFFLKNVRHTGIEAFGSEYTFSMDGITACKPKKSTIGQYCKSYELTFV EITYAQFAEILNALGKIYRPNSYNFVSKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLF GNFKNLALCGYINSMELSRSDKEMYVYALKLSRSIIRRNRSAPGKQRSGLHTGVASSLTS NLTGNLTSNLTGALPSNLPPCLTNGLPPLHFNKPSDDYSNQFCSPSPIYIIPYTPYANDS CVGQNVFYGENTFNGPVNCLPDEAQKGVFPNGQFRTVYSISTSGSFSMA

    No Results
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IDSitePeptideScoreMethod
PVX_099375140 SELSRSDKEM0.996unsp
PVX_099375      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India