PVX_100670 | aspartyl protease, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_100670SP0.0094350.9903480.000216CS pos: 20-21. AHN-AT. Pr: 0.3651
No Results

  • Fasta :-

    >PVX_100670 MGRIAPLLLTLAELLLYAHNATVCSAYHLGEAARKKACKYGCTGKGNSLVEAKTQSEQDY FTLKLSEHNFRWSVRLLMGSKKTPLQLGVVTSTPITALYCSYNASARESDQMKDLKYGVN ESEDVKYVGCKSRQCTAAQRGNSCAPINHFLKMIHEFGLRKKNCTSRFCSYINDMNFLNV DTQLDKRNMSVCSFSSTVGSEHIEGFYFKDSFYLHETVRCSYNYFGCLTQSDDLTFNNAI SGFIGLAYNRADDMAHSKESPSMMHTLVQKSISKRNVFTLCFVEGGGFASFGGVNNEALR KTPAVSKLQMSSQHLEADAPLELVADQQAAPHQIVWLAYSDTSKDTYSLLLKEVNLVSGS KRVESAIGAVALVDSYSYFLSFPAEITAKLKTAVHSSCAGGANTCSEIINKGVFTLKNQG VADFPALELVFDDGKVLIEPQDYLIHEGDGVYRVLLNSEGTLKLGVPFFLNKYLIFDNER GKLGVGPSDCTYKMKETFPGVDLSTPEADSKGDPEDEDCTRESFFQANKLTILALTSLSV VGGLVGGVFFFC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_100670.fa Sequence name : PVX_100670 Sequence length : 552 VALUES OF COMPUTED PARAMETERS Coef20 : 4.077 CoefTot : -0.918 ChDiff : -5 ZoneTo : 50 KR : 6 DE : 2 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.135 2.024 0.443 0.754 MesoH : -0.231 0.494 -0.269 0.275 MuHd_075 : 37.636 23.688 13.779 6.034 MuHd_095 : 32.906 19.958 10.476 6.264 MuHd_100 : 33.125 24.928 7.797 6.426 MuHd_105 : 33.281 26.405 9.675 7.468 Hmax_075 : 13.067 13.650 5.467 3.628 Hmax_095 : 11.000 25.300 1.736 4.180 Hmax_100 : 11.000 25.300 2.222 7.520 Hmax_105 : 18.700 25.300 4.353 7.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8530 0.1470 DFMC : 0.8824 0.1176
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 552 PVX_100670 MGRIAPLLLTLAELLLYAHNATVCSAYHLGEAARKKACKYGCTGKGNSLVEAKTQSEQDYFTLKLSEHNFRWSVRLLMGS 80 KKTPLQLGVVTSTPITALYCSYNASARESDQMKDLKYGVNESEDVKYVGCKSRQCTAAQRGNSCAPINHFLKMIHEFGLR 160 KKNCTSRFCSYINDMNFLNVDTQLDKRNMSVCSFSSTVGSEHIEGFYFKDSFYLHETVRCSYNYFGCLTQSDDLTFNNAI 240 SGFIGLAYNRADDMAHSKESPSMMHTLVQKSISKRNVFTLCFVEGGGFASFGGVNNEALRKTPAVSKLQMSSQHLEADAP 320 LELVADQQAAPHQIVWLAYSDTSKDTYSLLLKEVNLVSGSKRVESAIGAVALVDSYSYFLSFPAEITAKLKTAVHSSCAG 400 GANTCSEIINKGVFTLKNQGVADFPALELVFDDGKVLIEPQDYLIHEGDGVYRVLLNSEGTLKLGVPFFLNKYLIFDNER 480 GKLGVGPSDCTYKMKETFPGVDLSTPEADSKGDPEDEDCTRESFFQANKLTILALTSLSVVGGLVGGVFFFC 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_100670 3 ----MGR|IA 0.085 . PVX_100670 34 HLGEAAR|KK 0.087 . PVX_100670 35 LGEAARK|KA 0.101 . PVX_100670 36 GEAARKK|AC 0.130 . PVX_100670 39 ARKKACK|YG 0.092 . PVX_100670 45 KYGCTGK|GN 0.074 . PVX_100670 53 NSLVEAK|TQ 0.066 . PVX_100670 64 QDYFTLK|LS 0.073 . PVX_100670 71 LSEHNFR|WS 0.099 . PVX_100670 75 NFRWSVR|LL 0.113 . PVX_100670 81 RLLMGSK|KT 0.057 . PVX_100670 82 LLMGSKK|TP 0.089 . PVX_100670 107 SYNASAR|ES 0.130 . PVX_100670 113 RESDQMK|DL 0.112 . PVX_100670 116 DQMKDLK|YG 0.060 . PVX_100670 126 NESEDVK|YV 0.092 . PVX_100670 131 VKYVGCK|SR 0.071 . PVX_100670 133 YVGCKSR|QC 0.124 . PVX_100670 140 QCTAAQR|GN 0.088 . PVX_100670 152 PINHFLK|MI 0.074 . PVX_100670 160 IHEFGLR|KK 0.061 . PVX_100670 161 HEFGLRK|KN 0.080 . PVX_100670 162 EFGLRKK|NC 0.085 . PVX_100670 167 KKNCTSR|FC 0.154 . PVX_100670 186 VDTQLDK|RN 0.055 . PVX_100670 187 DTQLDKR|NM 0.119 . PVX_100670 209 IEGFYFK|DS 0.077 . PVX_100670 219 YLHETVR|CS 0.092 . PVX_100670 250 IGLAYNR|AD 0.074 . PVX_100670 258 DDMAHSK|ES 0.066 . PVX_100670 270 MHTLVQK|SI 0.087 . PVX_100670 274 VQKSISK|RN 0.053 . PVX_100670 275 QKSISKR|NV 0.425 . PVX_100670 300 VNNEALR|KT 0.082 . PVX_100670 301 NNEALRK|TP 0.069 . PVX_100670 307 KTPAVSK|LQ 0.060 . PVX_100670 344 AYSDTSK|DT 0.076 . PVX_100670 352 TYSLLLK|EV 0.072 . PVX_100670 361 NLVSGSK|RV 0.073 . PVX_100670 362 LVSGSKR|VE 0.279 . PVX_100670 389 PAEITAK|LK 0.066 . PVX_100670 391 EITAKLK|TA 0.060 . PVX_100670 411 CSEIINK|GV 0.084 . PVX_100670 417 KGVFTLK|NQ 0.065 . PVX_100670 435 LVFDDGK|VL 0.056 . PVX_100670 453 EGDGVYR|VL 0.090 . PVX_100670 463 NSEGTLK|LG 0.054 . PVX_100670 472 VPFFLNK|YL 0.062 . PVX_100670 480 LIFDNER|GK 0.086 . PVX_100670 482 FDNERGK|LG 0.056 . PVX_100670 493 PSDCTYK|MK 0.068 . PVX_100670 495 DCTYKMK|ET 0.083 . PVX_100670 511 TPEADSK|GD 0.069 . PVX_100670 521 EDEDCTR|ES 0.076 . PVX_100670 529 SFFQANK|LT 0.062 . ____________________________^_________________

  • Fasta :-

    >PVX_100670 ATGGGGCGAATTGCCCCCCTGCTGCTCACCCTGGCGGAACTCCTTTTGTACGCACACAAT GCAACAGTCTGTTCTGCGTATCATTTGGGAGAAGCGGCGAGGAAGAAGGCTTGCAAATAT GGTTGCACCGGTAAGGGTAACTCCCTCGTAGAGGCGAAAACCCAAAGCGAGCAGGACTAC TTCACCTTAAAGCTGAGTGAACACAACTTCAGGTGGAGTGTGCGCCTGCTGATGGGGTCG AAGAAGACGCCCCTTCAGTTGGGCGTCGTCACGTCCACCCCCATAACGGCCCTGTACTGC TCCTACAACGCGAGTGCACGTGAGAGTGACCAAATGAAGGATTTAAAATATGGGGTAAAC GAGTCGGAAGATGTAAAATACGTAGGCTGCAAAAGTAGGCAGTGCACTGCTGCACAGCGA GGCAATTCTTGTGCTCCGATAAATCATTTTCTCAAGATGATCCACGAATTTGGGTTAAGA AAAAAAAATTGTACCAGTCGATTTTGCAGCTACATAAATGATATGAACTTTTTAAATGTG GACACCCAGTTGGACAAGAGGAACATGTCCGTGTGTTCGTTCAGCTCGACTGTTGGTTCG GAACACATAGAGGGTTTTTATTTTAAAGATTCTTTTTACCTGCACGAAACGGTTAGATGC AGCTACAACTACTTCGGCTGCTTAACACAGAGTGACGACTTGACCTTCAATAATGCCATT TCTGGTTTTATAGGGTTGGCATATAACCGTGCAGATGATATGGCTCACTCGAAAGAGTCT CCCTCCATGATGCATACATTGGTTCAGAAGTCCATATCTAAAAGGAACGTCTTTACGTTG TGCTTCGTAGAAGGAGGGGGGTTTGCATCCTTCGGGGGAGTTAACAATGAAGCCTTAAGG AAGACCCCCGCTGTATCTAAACTGCAGATGAGTTCACAACACCTGGAAGCAGATGCCCCG CTGGAACTTGTGGCAGACCAGCAAGCCGCTCCGCACCAAATTGTTTGGCTCGCATATTCG GACACTTCCAAGGACACGTACAGCCTCCTCTTGAAGGAGGTCAACCTGGTGTCTGGCTCG AAGCGGGTGGAGAGTGCGATCGGCGCGGTGGCTCTCGTCGATTCGTACAGCTACTTCCTC TCCTTCCCAGCGGAAATCACCGCCAAGCTGAAGACCGCCGTGCACAGCTCCTGCGCGGGC GGGGCCAACACCTGCTCCGAGATCATCAACAAGGGGGTGTTCACACTGAAGAACCAGGGC GTGGCGGACTTCCCCGCGCTGGAGCTCGTCTTCGACGACGGGAAGGTGCTGATCGAGCCC CAGGACTACCTAATCCACGAAGGCGACGGAGTGTATAGAGTTTTGCTCAATTCAGAGGGA ACCCTCAAGTTGGGGGTCCCCTTTTTCCTGAACAAGTACCTCATCTTCGACAATGAAAGG GGGAAGCTGGGAGTAGGCCCCTCTGATTGCACCTACAAAATGAAGGAGACCTTTCCCGGA GTCGACTTGAGCACCCCGGAGGCGGACTCGAAGGGGGACCCCGAGGATGAGGACTGCACG AGGGAAAGCTTCTTTCAGGCGAACAAGTTAACCATCCTGGCGCTCACCTCTTTAAGCGTT GTGGGGGGCCTTGTCGGGGGCGTTTTTTTCTTCTGTTAA
  • Download Fasta

  • Fasta :-

    MGRIAPLLLTLAELLLYAHNATVCSAYHLGEAARKKACKYGCTGKGNSLVEAKTQSEQDY FTLKLSEHNFRWSVRLLMGSKKTPLQLGVVTSTPITALYCSYNASARESDQMKDLKYGVN ESEDVKYVGCKSRQCTAAQRGNSCAPINHFLKMIHEFGLRKKNCTSRFCSYINDMNFLNV DTQLDKRNMSVCSFSSTVGSEHIEGFYFKDSFYLHETVRCSYNYFGCLTQSDDLTFNNAI SGFIGLAYNRADDMAHSKESPSMMHTLVQKSISKRNVFTLCFVEGGGFASFGGVNNEALR KTPAVSKLQMSSQHLEADAPLELVADQQAAPHQIVWLAYSDTSKDTYSLLLKEVNLVSGS KRVESAIGAVALVDSYSYFLSFPAEITAKLKTAVHSSCAGGANTCSEIINKGVFTLKNQG VADFPALELVFDDGKVLIEPQDYLIHEGDGVYRVLLNSEGTLKLGVPFFLNKYLIFDNER GKLGVGPSDCTYKMKETFPGVDLSTPEADSKGDPEDEDCTRESFFQANKLTILALTSLSV VGGLVGGVFFFC

  • title: Active site flap
  • coordinates: S195,S196,T197,V198,H202,I203,E204,G205
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_100670510 SPEADSKGDP0.998unspPVX_100670510 SPEADSKGDP0.998unspPVX_100670510 SPEADSKGDP0.998unspPVX_100670257 SDMAHSKESP0.991unspPVX_100670365 SKRVESAIGA0.991unsp
PVX_100670      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India