PVX_101335 | 26S protease regulatory subunit 8, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_101335OTHER0.9996600.0000520.000288
No Results

  • Fasta :-

    >PVX_101335 MAAVDMQVRAGELPEEPKKDLKKEPSGASKSEEEMQSGIKTYYEMKIEEYESIINKKLQN KKRLEAQRNELNTRVRELCDEIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDISH SVNIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEV KEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDG FESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGI DMMKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLR KLWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_101335.fa Sequence name : PVX_101335 Sequence length : 424 VALUES OF COMPUTED PARAMETERS Coef20 : 3.031 CoefTot : 0.282 ChDiff : -3 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.335 0.788 -0.063 0.398 MesoH : -0.765 0.175 -0.411 0.158 MuHd_075 : 8.627 6.383 1.256 1.986 MuHd_095 : 16.926 1.852 2.884 1.263 MuHd_100 : 25.044 5.318 5.333 2.668 MuHd_105 : 32.677 9.903 7.487 4.355 Hmax_075 : -3.900 5.000 -2.829 1.970 Hmax_095 : 1.575 3.500 -2.046 2.048 Hmax_100 : 10.600 7.900 0.658 3.840 Hmax_105 : 5.950 4.900 -1.134 2.753 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9747 0.0253 DFMC : 0.9491 0.0509
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 424 PVX_101335 MAAVDMQVRAGELPEEPKKDLKKEPSGASKSEEEMQSGIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELCD 80 EIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDISHSVNIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVE 160 KVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 240 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILD 320 EALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMMKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQED 400 FEMAVAKVMKQDAEKNFTLRKLWK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_101335 9 AVDMQVR|AG 0.073 . PVX_101335 18 ELPEEPK|KD 0.063 . PVX_101335 19 LPEEPKK|DL 0.134 . PVX_101335 22 EPKKDLK|KE 0.056 . PVX_101335 23 PKKDLKK|EP 0.115 . PVX_101335 30 EPSGASK|SE 0.106 . PVX_101335 40 EMQSGIK|TY 0.056 . PVX_101335 46 KTYYEMK|IE 0.059 . PVX_101335 56 YESIINK|KL 0.064 . PVX_101335 57 ESIINKK|LQ 0.096 . PVX_101335 61 NKKLQNK|KR 0.061 . PVX_101335 62 KKLQNKK|RL 0.114 . PVX_101335 63 KLQNKKR|LE 0.171 . PVX_101335 68 KRLEAQR|NE 0.074 . PVX_101335 74 RNELNTR|VR 0.073 . PVX_101335 76 ELNTRVR|EL 0.116 . PVX_101335 97 YVGEIVK|PM 0.063 . PVX_101335 101 IVKPMGK|NK 0.053 . PVX_101335 103 KPMGKNK|VL 0.076 . PVX_101335 107 KNKVLVK|IN 0.064 . PVX_101335 113 KINPEGK|YV 0.096 . PVX_101335 132 QCTPNTR|VA 0.068 . PVX_101335 141 LYNDSYK|LH 0.058 . PVX_101335 144 DSYKLHK|IL 0.062 . PVX_101335 149 HKILPSK|VD 0.057 . PVX_101335 158 PLVSLMK|VE 0.054 . PVX_101335 161 SLMKVEK|VP 0.064 . PVX_101335 178 GLDQQVK|EV 0.083 . PVX_101335 181 QQVKEVK|EV 0.072 . PVX_101335 189 VIELPVK|HP 0.060 . PVX_101335 203 LGISQPK|GV 0.082 . PVX_101335 215 GPPGTGK|TL 0.059 . PVX_101335 220 GKTLLAR|AV 0.134 . PVX_101335 232 TDCTFIR|VS 0.131 . PVX_101335 241 GSELVQK|YI 0.105 . PVX_101335 248 YIGEGSR|MV 0.115 . PVX_101335 251 EGSRMVR|EL 0.260 . PVX_101335 258 ELFVMAR|EH 0.090 . PVX_101335 277 DSIGSQR|IE 0.114 . PVX_101335 289 GDSEVQR|TM 0.152 . PVX_101335 308 ESTQNIK|VI 0.055 . PVX_101335 315 VIMCTNR|ID 0.079 . PVX_101335 325 LDEALLR|PG 0.072 . PVX_101335 328 ALLRPGR|ID 0.204 . PVX_101335 331 RPGRIDR|KI 0.277 . PVX_101335 332 PGRIDRK|IE 0.075 . PVX_101335 343 NPNVEAR|ME 0.139 . PVX_101335 348 ARMEILK|IH 0.070 . PVX_101335 352 ILKIHSR|KM 0.075 . PVX_101335 353 LKIHSRK|MN 0.101 . PVX_101335 358 RKMNLMR|GI 0.139 . PVX_101335 364 RGIDMMK|IA 0.071 . PVX_101335 378 CSGAEVK|AV 0.103 . PVX_101335 390 AGMFALR|ER 0.080 . PVX_101335 392 MFALRER|RV 0.129 . PVX_101335 393 FALRERR|VH 0.353 . PVX_101335 407 FEMAVAK|VM 0.065 . PVX_101335 410 AVAKVMK|QD 0.074 . PVX_101335 415 MKQDAEK|NF 0.058 . PVX_101335 420 EKNFTLR|KL 0.106 . PVX_101335 421 KNFTLRK|LW 0.077 . PVX_101335 424 TLRKLWK|-- 0.080 . ____________________________^_________________

  • Fasta :-

    >PVX_101335 ATGGCGGCCGTGGACATGCAGGTGCGGGCGGGCGAGCTGCCGGAGGAGCCCAAGAAGGAC CTCAAGAAGGAGCCCAGCGGAGCGAGCAAGAGCGAGGAGGAAATGCAGTCGGGCATCAAA ACGTATTACGAAATGAAAATTGAGGAATACGAATCGATCATAAATAAAAAGTTGCAAAAC AAGAAGAGGTTGGAAGCTCAGAGAAATGAACTGAACACAAGAGTGAGGGAACTATGTGAT GAGATTCAGTACCTCCTGGAAGCTGCCTCTTATGTAGGCGAAATTGTAAAACCCATGGGC AAAAACAAAGTCCTCGTAAAAATAAACCCAGAAGGAAAATACGTGGTAGACATATCCCAT AGCGTAAACATAGCTCAGTGTACACCCAACACGAGAGTGGCTTTATATAATGACTCCTAT AAGTTGCATAAGATCCTTCCGAGTAAGGTAGATCCCCTTGTGTCTCTGATGAAGGTAGAA AAGGTCCCGGACTCTACATACGAAATGGTTGGTGGGTTAGACCAACAAGTGAAGGAAGTG AAAGAAGTGATCGAGTTGCCTGTGAAGCATCCAGAAATTTTTGAGTCCTTAGGAATTTCA CAACCGAAAGGGGTCCTCCTCTATGGCCCACCAGGAACAGGAAAGACTCTACTAGCCAGA GCGGTAGCACACCATACAGACTGCACCTTCATAAGAGTCTCAGGATCTGAGCTGGTTCAG AAGTACATCGGTGAAGGATCACGAATGGTGAGGGAGTTATTTGTCATGGCAAGGGAACAT GCCCCCTCTATCATTTTTATGGATGAAATAGATTCCATTGGAAGTCAAAGGATAGAAGGA GAGCATGGAGACTCAGAAGTTCAGAGGACTATGATGGAGCTGCTAAATCAGCTGGACGGA TTTGAGTCTACACAAAATATTAAAGTCATCATGTGTACCAACAGAATTGATATCCTGGAT GAGGCGTTGTTAAGACCAGGAAGAATTGACCGTAAAATTGAATTCCCTAACCCTAATGTT GAAGCTCGCATGGAGATTTTAAAAATCCACAGCAGGAAGATGAACCTCATGAGGGGCATC GATATGATGAAGATTGCCACGGACATGAACAACTGCTCTGGGGCAGAGGTCAAGGCCGTG TGCACCGAGGCAGGCATGTTTGCGCTGCGCGAGAGGCGCGTCCACGTCACGCAGGAGGAC TTCGAGATGGCCGTCGCCAAGGTGATGAAGCAGGACGCCGAGAAGAACTTCACCCTCAGG AAGTTGTGGAAGTAG
  • Download Fasta

  • Fasta :-

    MAAVDMQVRAGELPEEPKKDLKKEPSGASKSEEEMQSGIKTYYEMKIEEYESIINKKLQN KKRLEAQRNELNTRVRELCDEIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDISH SVNIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEV KEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDG FESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGI DMMKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLR KLWK

  • title: ATP binding site
  • coordinates: P210,P211,G212,T213,G214,K215,T216,L217,D268,N314
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_101335165 SKVPDSTYEM0.996unspPVX_101335165 SKVPDSTYEM0.996unspPVX_101335165 SKVPDSTYEM0.996unspPVX_101335234 SFIRVSGSEL0.996unspPVX_10133529 SPSGASKSEE0.993unspPVX_10133531 SGASKSEEEM0.994unsp
PVX_101335      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India