PVX_111100 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PVX_111100OTHER0.9999910.0000030.000006
No Results

  • Fasta :-

    >PVX_111100 MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQIWRMFFN FLYVGKFSLSWVFFMSLLAQFSSSLEKNAVFSTPGSYLYFITIQCTFLSLISILFYWPRG YPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFALIFLHLIMGQSLWVDIMGLM SGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRSVSDSR TPNSAGPTRRVFIGRGVRLGDN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_111100.fa Sequence name : PVX_111100 Sequence length : 262 VALUES OF COMPUTED PARAMETERS Coef20 : 3.055 CoefTot : 0.000 ChDiff : 11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.118 2.588 0.470 0.798 MesoH : 0.977 1.104 -0.025 0.492 MuHd_075 : 13.767 7.582 2.344 1.037 MuHd_095 : 23.035 13.470 5.161 3.803 MuHd_100 : 12.738 8.470 3.145 3.290 MuHd_105 : 12.497 9.770 4.769 3.611 Hmax_075 : 3.400 6.200 -1.758 2.850 Hmax_095 : 9.362 7.525 -0.512 3.850 Hmax_100 : 1.900 2.100 -2.080 2.740 Hmax_105 : 10.700 10.383 1.628 4.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9800 0.0200 DFMC : 0.9889 0.0111
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 262 PVX_111100 MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQIWRMFFNFLYVGKFSLSWVFFMSLLAQ 80 FSSSLEKNAVFSTPGSYLYFITIQCTFLSLISILFYWPRGYPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFA 160 LIFLHLIMGQSLWVDIMGLMSGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRSVSDSR 240 TPNSAGPTRRVFIGRGVRLGDN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_111100 18 NLPNVTK|YL 0.070 . PVX_111100 56 NNYQIWR|MF 0.092 . PVX_111100 66 NFLYVGK|FS 0.063 . PVX_111100 87 FSSSLEK|NA 0.070 . PVX_111100 119 ILFYWPR|GY 0.095 . PVX_111100 138 IIYYWSR|RE 0.076 . PVX_111100 139 IYYWSRR|EA 0.193 . PVX_111100 153 IYFFTVK|GY 0.059 . PVX_111100 189 HIYYFFR|EL 0.107 . PVX_111100 194 FRELLPR|EG 0.102 . PVX_111100 203 GPNLLEK|TP 0.067 . PVX_111100 206 LLEKTPK|IF 0.086 . PVX_111100 210 TPKIFDK|IM 0.079 . PVX_111100 214 FDKIMMK|LR 0.060 . PVX_111100 216 KIMMKLR|EF 0.090 . PVX_111100 219 MKLREFR|LN 0.245 . PVX_111100 225 RLNQGIR|GN 0.091 . PVX_111100 230 IRGNFSR|YG 0.131 . PVX_111100 234 FSRYGYR|SV 0.297 . PVX_111100 240 RSVSDSR|TP 0.084 . PVX_111100 249 NSAGPTR|RV 0.160 . PVX_111100 250 SAGPTRR|VF 0.146 . PVX_111100 255 RRVFIGR|GV 0.186 . PVX_111100 258 FIGRGVR|LG 0.145 . ____________________________^_________________

  • Fasta :-

    >PVX_111100 ATGGATATTTCCGGGCCGGAGGTTTGGTATGGCAACTTACCAAATGTAACCAAGTATTTA ATAACCCTAATTTTTTTGGTGACCCTTCTCATAACATGCAACTTGCTGAACGTTGTGTAC CTTCTGCTTGATTGGAATTTGATATATAATAATTACCAAATATGGAGGATGTTTTTTAAC TTTCTGTACGTGGGGAAGTTTTCCCTTTCGTGGGTTTTTTTTATGTCTTTATTGGCCCAG TTTTCTTCCTCCCTCGAGAAGAACGCAGTGTTTTCCACCCCGGGATCCTACCTGTACTTC ATCACCATTCAGTGCACCTTCTTATCGCTCATAAGCATTTTGTTTTATTGGCCCAGAGGC TACCCCTTCCTGGGAAACTCCCTCCTGTTCGCCATCATTTACTACTGGTCCAGGCGGGAG GCGTGGAGCCAAGTCTCCATTTACTTCTTCACGGTGAAGGGCTACCAGCTGCCCTTCGCA CTCATTTTCCTGCACCTCATCATGGGACAGTCCCTCTGGGTGGACATTATGGGCCTCATG TCCGGACACATCTACTACTTTTTCAGGGAGCTTCTCCCGAGGGAAGGAGGACCAAATTTG CTCGAGAAAACGCCCAAGATTTTCGATAAAATTATGATGAAGCTGAGGGAGTTCCGCCTA AACCAGGGAATAAGGGGAAACTTCTCGCGGTACGGGTACAGAAGTGTGAGTGACTCCAGG ACGCCCAACAGTGCCGGGCCCACAAGGAGAGTCTTCATCGGTCGGGGAGTCAGACTGGGT GACAATTGA
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  • Fasta :-

    MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQIWRMFFN FLYVGKFSLSWVFFMSLLAQFSSSLEKNAVFSTPGSYLYFITIQCTFLSLISILFYWPRG YPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFALIFLHLIMGQSLWVDIMGLM SGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRSVSDSR TPNSAGPTRRVFIGRGVRLGDN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_111100235 SYGYRSVSDS0.998unspPVX_111100237 SYRSVSDSRT0.997unsp
PVX_111100      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India