PVX_114480 | protein DJ-1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0009228      

  • Computed_GO_Processes:  thiamine biosynthetic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_114480OTHER0.9990920.0008550.000053
No Results

  • Fasta :-

    >PVX_114480 MSGKKTALVVVASGSEDVEYITTVDVLRRANISVTTASVEETEKVCLQSKNVVIADTTID KVKDNTFDVIVIPGGMKGSNAISNCPTVIEMLKVQKSSNKFYAAICAAPETVLHRHSLID DVEAVAYPSFESDFKHIGKGRVCVSKNCITSVGPGSAVEFALKIVEMLLSRDAALNLASG FLLHPSVTF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_114480.fa Sequence name : PVX_114480 Sequence length : 189 VALUES OF COMPUTED PARAMETERS Coef20 : 3.640 CoefTot : 0.014 ChDiff : -2 ZoneTo : 15 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.159 0.128 0.516 MesoH : -0.561 0.443 -0.341 0.211 MuHd_075 : 1.430 2.185 0.891 1.142 MuHd_095 : 21.675 10.989 7.287 4.121 MuHd_100 : 12.964 10.772 4.618 3.337 MuHd_105 : 5.930 9.719 1.071 2.054 Hmax_075 : 1.867 8.283 -0.384 2.840 Hmax_095 : 12.000 12.800 2.631 4.700 Hmax_100 : 4.800 11.200 0.447 3.980 Hmax_105 : 5.200 11.600 -0.368 3.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9654 0.0346 DFMC : 0.9358 0.0642
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 189 PVX_114480 MSGKKTALVVVASGSEDVEYITTVDVLRRANISVTTASVEETEKVCLQSKNVVIADTTIDKVKDNTFDVIVIPGGMKGSN 80 AISNCPTVIEMLKVQKSSNKFYAAICAAPETVLHRHSLIDDVEAVAYPSFESDFKHIGKGRVCVSKNCITSVGPGSAVEF 160 ALKIVEMLLSRDAALNLASGFLLHPSVTF 240 ................................................................................ 80 ................................................................................ 160 ............................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_114480 4 ---MSGK|KT 0.064 . PVX_114480 5 --MSGKK|TA 0.092 . PVX_114480 28 TTVDVLR|RA 0.101 . PVX_114480 29 TVDVLRR|AN 0.143 . PVX_114480 44 SVEETEK|VC 0.056 . PVX_114480 50 KVCLQSK|NV 0.073 . PVX_114480 61 ADTTIDK|VK 0.056 . PVX_114480 63 TTIDKVK|DN 0.074 . PVX_114480 77 VIPGGMK|GS 0.059 . PVX_114480 93 TVIEMLK|VQ 0.054 . PVX_114480 96 EMLKVQK|SS 0.073 . PVX_114480 100 VQKSSNK|FY 0.072 . PVX_114480 115 PETVLHR|HS 0.071 . PVX_114480 135 SFESDFK|HI 0.085 . PVX_114480 139 DFKHIGK|GR 0.059 . PVX_114480 141 KHIGKGR|VC 0.081 . PVX_114480 146 GRVCVSK|NC 0.074 . PVX_114480 163 AVEFALK|IV 0.069 . PVX_114480 171 VEMLLSR|DA 0.090 . ____________________________^_________________

  • Fasta :-

    >PVX_114480 GTTAAGCAAACTGTAGAAAAAGGAAACAACACGTCAACATTTGTCCTTTAAAGCAACTTC TAGCATTCTCTATGTTGTTATTTTTTCTCCAGTTTGTCCCCGAAAATGTGACTGCTTTTG GTTTTTTTTTTTTTTTTTTGCATGCATTTTTCTTCTGGGTTATACCCTCTCCTATGTAGA AGGGTTCTTTGCATCCCCGTAGGTGAGGCCACCACGCAAAAACGCCTTTGCACATGCGCA TGAATACAAAATGAGCACATGGTGATGTACACTTATAGGATACCCCCCTTACGTAATTTT TGCCAAGCAAAACTGTGTACCCTCTTATATCGTATAAAATCACCATGAGCGGAAAAAAAA CAGCCTTAGTTGTGGTGGCATCCGGATCGGAAGATGTGGAATATATTACAACGGTCGATG TGCTAAGGAGAGCTAACATCAGCGTGACAACAGCGTCCGTGGAGGAAACGGAAAAGGTGT GCCTGCAGTCGAAGAACGTGGTAATTGCGGACACGACAATTGACAAGGTAAAGGATAACA CCTTTGACGTAATTGTCATTCCAGGGGGCATGAAAGGATCGAACGCAATATCAAATTGCC CAACCGTTATTGAAATGTTGAAGGTGCAGAAAAGCAGCAACAAATTTTATGCGGCCATAT GTGCAGCCCCTGAAACTGTCCTACATCGCCATTCCCTAATTGATGACGTTGAGGCAGTAG CATACCCATCGTTCGAAAGCGATTTCAAGCATATCGGCAAGGGAAGAGTGTGCGTATCAA AGAACTGTATAACCTCTGTTGGCCCCGGATCTGCCGTCGAATTTGCCCTTAAAATTGTCG AAATGTTGTTAAGCAGAGATGCAGCTCTTAACCTTGCCAGCGGTTTTTTACTTCACCCCT CTGTGACGTTTTAATGTACCATACGGCTTTGCTGATTGATGCGGAGGTGTATGGATAGAA AAGCGCGCACCCTAACCTGCATGGCGTAAATGTGTCTTTAAGCGCGCGCTGAAAGTGCTA GCATAAAAGGGTATATCTGCACATATACATATACACACGTACATGCATACGTATATGCAT ACATACTTACATACCCTTGTACGTGTACATGTTCTCCCCGTGTGCATCCCTCGATCGGAA AAAACTGCTAAGGAACACCTTTGAACATACCCTTTTTAAACGGAAGCCATTTTGAACAAA CGCTAACTTTTACGCAAAGGAAAAGGTGTTTTAATAAGATCCCCATG
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  • Fasta :-

    MSGKKTALVVVASGSEDVEYITTVDVLRRANISVTTASVEETEKVCLQSKNVVIADTTID KVKDNTFDVIVIPGGMKGSNAISNCPTVIEMLKVQKSSNKFYAAICAAPETVLHRHSLID DVEAVAYPSFESDFKHIGKGRVCVSKNCITSVGPGSAVEFALKIVEMLLSRDAALNLASG FLLHPSVTF

  • title: conserved cys residue
  • coordinates: C106
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_11448038 SVTTASVEET0.997unspPVX_114480117 SLHRHSLIDD0.997unsp
PVX_114480      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India