PVX_114520 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_114520OTHER0.9999990.0000000.000001
No Results

  • Fasta :-

    >PVX_114520 MHYEELTNNCCEEGSTNVERISLAGCTRLVYCFFSIAFLIVFSCATIGKNGIVCLVLSFS PSCVYLYLFGRQIKRRIKIAHAVEMMLYGAVLSVFLAGNLEYSFSLFFFHFCYICFVKDV GGTLLFVCSVVVFFYFFLVVAYVEEVSKILPMIFVQMNEKKNKNEYVELPLVDSTGFLNE GAHEADQDEKKDTGVDKFRYIYANDTLEYIFFSLCSSAGFSSTENLLYAAQATRQNFLSI IVLRNLICVLFHMSCSGVASYNIATRVKQKSCAANLLGVLGCLFTSSLFHALYDYSIFFS SFSIPAYQASFLTLLFVYCFFCMLLIFSVLVRRSAKGRGGGHSCG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_114520.fa Sequence name : PVX_114520 Sequence length : 345 VALUES OF COMPUTED PARAMETERS Coef20 : 3.130 CoefTot : -0.396 ChDiff : 1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.712 3.000 0.622 0.957 MesoH : 1.168 1.591 0.122 0.612 MuHd_075 : 29.150 17.045 10.129 3.115 MuHd_095 : 31.118 19.248 12.173 4.999 MuHd_100 : 24.301 15.749 10.371 3.922 MuHd_105 : 16.436 10.597 7.586 2.452 Hmax_075 : 3.033 7.467 2.112 1.855 Hmax_095 : 10.063 8.575 3.962 2.879 Hmax_100 : 4.100 4.600 2.036 2.400 Hmax_105 : -1.925 1.100 -0.020 0.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9832 0.0168 DFMC : 0.9639 0.0361
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 345 PVX_114520 MHYEELTNNCCEEGSTNVERISLAGCTRLVYCFFSIAFLIVFSCATIGKNGIVCLVLSFSPSCVYLYLFGRQIKRRIKIA 80 HAVEMMLYGAVLSVFLAGNLEYSFSLFFFHFCYICFVKDVGGTLLFVCSVVVFFYFFLVVAYVEEVSKILPMIFVQMNEK 160 KNKNEYVELPLVDSTGFLNEGAHEADQDEKKDTGVDKFRYIYANDTLEYIFFSLCSSAGFSSTENLLYAAQATRQNFLSI 240 IVLRNLICVLFHMSCSGVASYNIATRVKQKSCAANLLGVLGCLFTSSLFHALYDYSIFFSSFSIPAYQASFLTLLFVYCF 320 FCMLLIFSVLVRRSAKGRGGGHSCG 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_114520 20 GSTNVER|IS 0.099 . PVX_114520 28 SLAGCTR|LV 0.108 . PVX_114520 49 SCATIGK|NG 0.064 . PVX_114520 71 YLYLFGR|QI 0.086 . PVX_114520 74 LFGRQIK|RR 0.117 . PVX_114520 75 FGRQIKR|RI 0.152 . PVX_114520 76 GRQIKRR|IK 0.232 . PVX_114520 78 QIKRRIK|IA 0.250 . PVX_114520 118 CYICFVK|DV 0.104 . PVX_114520 148 YVEEVSK|IL 0.064 . PVX_114520 160 FVQMNEK|KN 0.056 . PVX_114520 161 VQMNEKK|NK 0.098 . PVX_114520 163 MNEKKNK|NE 0.075 . PVX_114520 190 EADQDEK|KD 0.057 . PVX_114520 191 ADQDEKK|DT 0.146 . PVX_114520 197 KDTGVDK|FR 0.068 . PVX_114520 199 TGVDKFR|YI 0.130 . PVX_114520 234 YAAQATR|QN 0.083 . PVX_114520 244 LSIIVLR|NL 0.126 . PVX_114520 266 SYNIATR|VK 0.086 . PVX_114520 268 NIATRVK|QK 0.066 . PVX_114520 270 ATRVKQK|SC 0.104 . PVX_114520 332 IFSVLVR|RS 0.111 . PVX_114520 333 FSVLVRR|SA 0.254 . PVX_114520 336 LVRRSAK|GR 0.274 . PVX_114520 338 RRSAKGR|GG 0.225 . ____________________________^_________________

  • Fasta :-

    >PVX_114520 ATGCATTATGAGGAATTGACAAACAACTGCTGCGAAGAAGGCTCAACAAATGTAGAGAGG ATTTCCCTTGCCGGGTGTACGCGTCTGGTGTACTGCTTTTTCTCCATAGCATTTCTGATT GTTTTTTCTTGTGCCACCATCGGAAAAAATGGAATCGTCTGCTTAGTTCTGTCCTTTTCC CCCAGTTGTGTTTACCTATACCTGTTTGGAAGACAAATAAAAAGAAGAATAAAAATTGCG CATGCTGTCGAAATGATGTTATACGGAGCTGTGCTGTCCGTTTTTCTAGCCGGCAACTTA GAATATTCCTTTTCTTTATTTTTTTTTCATTTTTGTTACATATGTTTTGTGAAAGACGTC GGAGGGACTCTCCTTTTTGTCTGTTCAGTGGTGGTTTTTTTTTACTTCTTCCTGGTAGTG GCGTACGTGGAGGAAGTGTCTAAAATACTTCCAATGATTTTCGTCCAAATGAATGAGAAA AAAAACAAAAATGAGTATGTAGAATTACCCCTCGTTGACAGCACGGGCTTCTTAAATGAA GGGGCACATGAAGCAGACCAGGATGAGAAGAAAGACACAGGGGTGGATAAATTTAGATAC ATTTACGCAAATGATACACTGGAATATATTTTTTTCTCCTTGTGCTCATCCGCCGGATTT TCGAGCACCGAAAATTTACTTTACGCTGCCCAGGCGACAAGGCAGAACTTTTTATCCATA ATTGTGTTAAGAAATTTGATCTGCGTGCTGTTCCACATGAGCTGTTCCGGAGTAGCGTCT TACAATATTGCCACGCGAGTGAAACAGAAAAGTTGTGCTGCCAATTTGCTGGGCGTCCTG GGCTGCCTCTTCACTTCTTCCCTCTTCCACGCATTGTATGACTACTCTATTTTTTTCAGT TCGTTTAGTATCCCCGCGTATCAAGCTTCCTTTTTGACCCTGTTGTTTGTGTATTGCTTC TTCTGCATGCTGCTCATCTTTTCCGTTCTTGTGAGGCGCTCCGCGAAGGGGAGAGGGGGG GGTCACTCGTGCGGATGA
  • Download Fasta

  • Fasta :-

    MHYEELTNNCCEEGSTNVERISLAGCTRLVYCFFSIAFLIVFSCATIGKNGIVCLVLSFS PSCVYLYLFGRQIKRRIKIAHAVEMMLYGAVLSVFLAGNLEYSFSLFFFHFCYICFVKDV GGTLLFVCSVVVFFYFFLVVAYVEEVSKILPMIFVQMNEKKNKNEYVELPLVDSTGFLNE GAHEADQDEKKDTGVDKFRYIYANDTLEYIFFSLCSSAGFSSTENLLYAAQATRQNFLSI IVLRNLICVLFHMSCSGVASYNIATRVKQKSCAANLLGVLGCLFTSSLFHALYDYSIFFS SFSIPAYQASFLTLLFVYCFFCMLLIFSVLVRRSAKGRGGGHSCG

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PVX_114520      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India