PVX_114795 | ubiquitin-conjugating enzyme, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_114795OTHER0.9999090.0000290.000062
No Results

  • Fasta :-

    >PVX_114795 MNSTTRSSKELLRLQKELKDIENENVQEIDAHVKDSNISEWVGFIKGPSGTPYEDGHFIL DITIPNDYPYNPPKIKFNTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLS DPQPDDPQDAEVAKMYKENYSLFLKTASVWTKTFATGPKLEPREVIIKKITEMGFTEDQA KKALIKADWNETLALNTLLENS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_114795.fa Sequence name : PVX_114795 Sequence length : 202 VALUES OF COMPUTED PARAMETERS Coef20 : 4.127 CoefTot : 0.224 ChDiff : -6 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.706 1.224 0.026 0.381 MesoH : -0.723 -0.029 -0.478 0.176 MuHd_075 : 9.557 4.663 3.501 1.310 MuHd_095 : 45.247 18.982 11.508 7.530 MuHd_100 : 55.142 25.607 13.627 10.033 MuHd_105 : 55.544 27.072 13.278 10.859 Hmax_075 : -10.500 -1.400 -4.266 -0.163 Hmax_095 : 6.700 5.600 -0.266 2.040 Hmax_100 : 9.500 8.300 -0.011 2.860 Hmax_105 : 14.200 11.000 1.684 3.530 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7857 0.2143 DFMC : 0.7709 0.2291
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 202 PVX_114795 MNSTTRSSKELLRLQKELKDIENENVQEIDAHVKDSNISEWVGFIKGPSGTPYEDGHFILDITIPNDYPYNPPKIKFNTK 80 IWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENYSLFLKTASVWTKTFATGPKL 160 EPREVIIKKITEMGFTEDQAKKALIKADWNETLALNTLLENS 240 ................................................................................ 80 ................................................................................ 160 .......................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_114795 6 -MNSTTR|SS 0.126 . PVX_114795 9 STTRSSK|EL 0.108 . PVX_114795 13 SSKELLR|LQ 0.073 . PVX_114795 16 ELLRLQK|EL 0.137 . PVX_114795 19 RLQKELK|DI 0.091 . PVX_114795 34 EIDAHVK|DS 0.074 . PVX_114795 46 EWVGFIK|GP 0.065 . PVX_114795 74 YPYNPPK|IK 0.069 . PVX_114795 76 YNPPKIK|FN 0.074 . PVX_114795 80 KIKFNTK|IW 0.079 . PVX_114795 99 ICLDVLK|NE 0.052 . PVX_114795 109 SPALTIR|TA 0.123 . PVX_114795 134 QDAEVAK|MY 0.075 . PVX_114795 137 EVAKMYK|EN 0.060 . PVX_114795 145 NYSLFLK|TA 0.074 . PVX_114795 152 TASVWTK|TF 0.087 . PVX_114795 159 TFATGPK|LE 0.057 . PVX_114795 163 GPKLEPR|EV 0.164 . PVX_114795 168 PREVIIK|KI 0.073 . PVX_114795 169 REVIIKK|IT 0.140 . PVX_114795 181 FTEDQAK|KA 0.067 . PVX_114795 182 TEDQAKK|AL 0.121 . PVX_114795 186 AKKALIK|AD 0.064 . ____________________________^_________________

  • Fasta :-

    >PVX_114795 ATGAATTCCACAACGAGAAGTTCAAAGGAGTTGCTCCGTCTGCAGAAGGAGCTAAAAGAC ATTGAAAATGAAAATGTGCAAGAAATAGATGCCCACGTGAAGGACTCCAACATTTCCGAG TGGGTTGGTTTTATTAAGGGGCCATCGGGGACGCCCTATGAAGACGGCCATTTTATTTTG GATATAACTATACCGAATGATTACCCGTATAACCCCCCCAAGATAAAGTTTAATACCAAA ATATGGCACCCAAACATTTCAAGCCAAACAGGGGCAATCTGCCTGGACGTCTTAAAAAAT GAATGGAGCCCCGCGTTGACGATTAGAACTGCCCTTTTGTCCATTCAGGCGCTGCTGTCT GATCCGCAACCAGACGACCCCCAAGACGCAGAAGTAGCGAAAATGTACAAAGAGAACTAT TCCCTCTTTTTAAAAACAGCCAGCGTGTGGACGAAGACTTTTGCCACGGGACCGAAACTC GAGCCAAGAGAAGTCATTATTAAGAAGATCACCGAAATGGGATTTACGGAGGACCAGGCG AAGAAAGCCTTAATAAAGGCCGATTGGAATGAAACCCTGGCGCTAAACACCCTCCTCGAA AATTCCTAA
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  • Fasta :-

    MNSTTRSSKELLRLQKELKDIENENVQEIDAHVKDSNISEWVGFIKGPSGTPYEDGHFIL DITIPNDYPYNPPKIKFNTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLS DPQPDDPQDAEVAKMYKENYSLFLKTASVWTKTFATGPKLEPREVIIKKITEMGFTEDQA KKALIKADWNETLALNTLLENS

  • title: active site cysteine
  • coordinates: C94
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_1147957 SSTTRSSKEL0.991unspPVX_1147958 STTRSSKELL0.996unsp
PVX_114795      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India