PVX_115035 | conserved Plasmodium protein, unknown function

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005543      

  • Computed_GO_Functions:  phospholipid binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_115035OTHER0.9999770.0000200.000002
No Results

  • Fasta :-

    >PVX_115035 METAAKDGCNHVMQNDENKQEYLDFSDDFVFCSTCHNFSPYHKEGYLEKRCSNSWCGYSK RWFLLKNKKLYYFKSKESLRPSGVLDLELIHMDINYEQGIKRKRSGEDCFLYCIESRTYK NDSKKESLLILTPRNTGLRFYLRGEDAEICEWYNLLNSSMTSKKMISQPKFIFSESNFWK IDRISVDVFESIADTGDIVLFRSNVASAKLQRIITRGEYDHIGMILRNDKKGIFLLEALS NMGIILTPWELFRKNRWNEAYTRIALRRLTWDNSEQNLQKLLHFLKNTIGKKYNLKIINF LAPKTDDAGYFCSELIGECWKIMGVIPVNTTCSHIWPSNFSEKFEEKMKLQEGCQLNNEL CIDFTL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_115035.fa Sequence name : PVX_115035 Sequence length : 366 VALUES OF COMPUTED PARAMETERS Coef20 : 2.858 CoefTot : 0.000 ChDiff : 4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.218 1.429 0.087 0.631 MesoH : -0.908 0.286 -0.494 0.162 MuHd_075 : 32.504 13.616 10.407 3.827 MuHd_095 : 31.560 24.978 11.351 6.829 MuHd_100 : 26.821 20.628 9.135 5.686 MuHd_105 : 17.856 13.497 6.032 3.781 Hmax_075 : 0.300 1.167 -1.516 1.270 Hmax_095 : 5.600 8.925 1.054 3.054 Hmax_100 : 2.400 5.300 -1.201 2.280 Hmax_105 : -2.400 3.000 -1.340 1.610 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9021 0.0979 DFMC : 0.8870 0.1130
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 366 PVX_115035 METAAKDGCNHVMQNDENKQEYLDFSDDFVFCSTCHNFSPYHKEGYLEKRCSNSWCGYSKRWFLLKNKKLYYFKSKESLR 80 PSGVLDLELIHMDINYEQGIKRKRSGEDCFLYCIESRTYKNDSKKESLLILTPRNTGLRFYLRGEDAEICEWYNLLNSSM 160 TSKKMISQPKFIFSESNFWKIDRISVDVFESIADTGDIVLFRSNVASAKLQRIITRGEYDHIGMILRNDKKGIFLLEALS 240 NMGIILTPWELFRKNRWNEAYTRIALRRLTWDNSEQNLQKLLHFLKNTIGKKYNLKIINFLAPKTDDAGYFCSELIGECW 320 KIMGVIPVNTTCSHIWPSNFSEKFEEKMKLQEGCQLNNELCIDFTL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_115035 6 -METAAK|DG 0.069 . PVX_115035 19 MQNDENK|QE 0.063 . PVX_115035 43 NFSPYHK|EG 0.061 . PVX_115035 49 KEGYLEK|RC 0.064 . PVX_115035 50 EGYLEKR|CS 0.133 . PVX_115035 60 SWCGYSK|RW 0.059 . PVX_115035 61 WCGYSKR|WF 0.140 . PVX_115035 66 KRWFLLK|NK 0.060 . PVX_115035 68 WFLLKNK|KL 0.055 . PVX_115035 69 FLLKNKK|LY 0.072 . PVX_115035 74 KKLYYFK|SK 0.082 . PVX_115035 76 LYYFKSK|ES 0.059 . PVX_115035 80 KSKESLR|PS 0.093 . PVX_115035 101 NYEQGIK|RK 0.059 . PVX_115035 102 YEQGIKR|KR 0.149 . PVX_115035 103 EQGIKRK|RS 0.086 . PVX_115035 104 QGIKRKR|SG 0.306 . PVX_115035 117 LYCIESR|TY 0.068 . PVX_115035 120 IESRTYK|ND 0.235 . PVX_115035 124 TYKNDSK|KE 0.061 . PVX_115035 125 YKNDSKK|ES 0.106 . PVX_115035 134 LLILTPR|NT 0.091 . PVX_115035 139 PRNTGLR|FY 0.126 . PVX_115035 143 GLRFYLR|GE 0.111 . PVX_115035 163 NSSMTSK|KM 0.071 . PVX_115035 164 SSMTSKK|MI 0.178 . PVX_115035 170 KMISQPK|FI 0.076 . PVX_115035 180 SESNFWK|ID 0.085 . PVX_115035 183 NFWKIDR|IS 0.095 . PVX_115035 202 GDIVLFR|SN 0.129 . PVX_115035 209 SNVASAK|LQ 0.071 . PVX_115035 212 ASAKLQR|II 0.141 . PVX_115035 216 LQRIITR|GE 0.130 . PVX_115035 227 HIGMILR|ND 0.090 . PVX_115035 230 MILRNDK|KG 0.087 . PVX_115035 231 ILRNDKK|GI 0.113 . PVX_115035 253 TPWELFR|KN 0.104 . PVX_115035 254 PWELFRK|NR 0.067 . PVX_115035 256 ELFRKNR|WN 0.384 . PVX_115035 263 WNEAYTR|IA 0.089 . PVX_115035 267 YTRIALR|RL 0.077 . PVX_115035 268 TRIALRR|LT 0.187 . PVX_115035 280 SEQNLQK|LL 0.066 . PVX_115035 286 KLLHFLK|NT 0.062 . PVX_115035 291 LKNTIGK|KY 0.069 . PVX_115035 292 KNTIGKK|YN 0.097 . PVX_115035 296 GKKYNLK|II 0.061 . PVX_115035 304 INFLAPK|TD 0.066 . PVX_115035 321 LIGECWK|IM 0.069 . PVX_115035 343 PSNFSEK|FE 0.089 . PVX_115035 347 SEKFEEK|MK 0.071 . PVX_115035 349 KFEEKMK|LQ 0.064 . ____________________________^_________________

  • Fasta :-

    >PVX_115035 ATGGAAACAGCGGCGAAAGATGGATGCAACCACGTCATGCAAAATGATGAAAATAAGCAG GAATATCTTGACTTTTCCGACGACTTTGTCTTCTGCTCGACCTGCCACAATTTCTCGCCG TACCACAAAGAGGGCTACCTAGAAAAGAGGTGCTCGAATTCCTGGTGCGGCTACTCCAAA AGATGGTTCCTTCTGAAAAACAAAAAGTTATACTACTTCAAAAGCAAAGAAAGCTTGAGG CCGTCGGGCGTCCTCGATCTGGAGCTGATCCACATGGACATTAACTACGAACAGGGGATA AAGCGGAAGCGAAGTGGCGAAGACTGCTTTCTGTACTGCATCGAATCGAGGACGTACAAG AACGACAGCAAAAAGGAGTCGCTCCTAATTCTGACCCCCAGGAACACAGGCCTCAGGTTT TATTTAAGGGGTGAAGACGCGGAAATATGCGAGTGGTACAACTTGCTAAACAGCTCCATG ACGAGCAAGAAAATGATTAGTCAACCGAAATTTATTTTTTCGGAGAGTAACTTTTGGAAA ATTGACCGAATATCGGTTGACGTATTCGAGTCGATTGCGGACACGGGCGACATTGTCTTG TTCAGGTCCAACGTGGCTTCCGCGAAGCTGCAGAGGATCATAACGAGGGGCGAGTACGAC CACATCGGCATGATTCTCAGGAACGACAAAAAAGGCATTTTTCTTTTGGAGGCTTTATCC AACATGGGAATCATCCTAACGCCGTGGGAGCTTTTTCGAAAGAACCGGTGGAACGAGGCC TACACCAGAATCGCCCTGAGACGGCTGACCTGGGACAACTCCGAACAAAATCTCCAAAAG TTGCTGCACTTTCTAAAAAACACCATAGGGAAAAAATACAACCTCAAGATAATTAATTTC CTGGCCCCCAAAACGGATGACGCCGGCTATTTCTGCTCCGAGCTAATAGGAGAATGCTGG AAGATAATGGGCGTCATCCCTGTAAACACGACATGCTCTCATATCTGGCCCAGCAATTTT TCCGAAAAGTTCGAGGAGAAAATGAAGTTGCAGGAAGGCTGCCAGCTAAATAATGAGCTG TGCATAGACTTCACCCTGTGA
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  • Fasta :-

    METAAKDGCNHVMQNDENKQEYLDFSDDFVFCSTCHNFSPYHKEGYLEKRCSNSWCGYSK RWFLLKNKKLYYFKSKESLRPSGVLDLELIHMDINYEQGIKRKRSGEDCFLYCIESRTYK NDSKKESLLILTPRNTGLRFYLRGEDAEICEWYNLLNSSMTSKKMISQPKFIFSESNFWK IDRISVDVFESIADTGDIVLFRSNVASAKLQRIITRGEYDHIGMILRNDKKGIFLLEALS NMGIILTPWELFRKNRWNEAYTRIALRRLTWDNSEQNLQKLLHFLKNTIGKKYNLKIINF LAPKTDDAGYFCSELIGECWKIMGVIPVNTTCSHIWPSNFSEKFEEKMKLQEGCQLNNEL CIDFTL

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_115035105 SKRKRSGEDC0.998unspPVX_115035123 SYKNDSKKES0.998unsp
PVX_115035      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India