PVX_116695 | plasmepsin V, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_116695SP0.0032950.9966540.000051CS pos: 34-35. VQG-RS. Pr: 0.7809
No Results

  • Fasta :-

    >PVX_116695 MVGASLGPPGRGSLSRLIRLVICVLTLCALSVQGRSESTEGHSKDLLYKYKLYGDIDEYA YYFLDIDIGTPEQRISLILDTGSSSLSFPCAGCKNCGVHMENPFNLNNSKTSSILYCENE ECPFKLNCVKGKCEYMQSYCEGSQISGFYFSDVVSVVSYNNERVTFRKLMGCHMHEESLF LYQQATGVLGMSLSKPQGIPTFVNLLFDNAPQLKQVFTICISENGGELIAGGYDPAYIVR RGGSKSVSGQGSGPVSESLSESGEDPQVALREAEKVVWENVTRKYYYYIKVRGLDMFGTN MMSSSKGLEMLVDSGSTFTHIPEDLYNKLNYFFDILCIQDMNNAYDVNKRLKMTNESFNN PLVQFDDFRKSLKSIIAKENMCVKIVDGVQCWKYLEGLPDLFVTLSNNYKMKWQPHSYLY KKESFWCKGIEKQVNNKPILGLTFFKNRQVIFDIQKNRIGFVDANCPSHPTHTRPRTYNE YKRKDNIFLKIPFFYLYSLFVVFALSVLLSLVFYVRRLYHMEYSPLPSEGKAPADA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_116695.fa Sequence name : PVX_116695 Sequence length : 536 VALUES OF COMPUTED PARAMETERS Coef20 : 4.069 CoefTot : 0.325 ChDiff : 3 ZoneTo : 36 KR : 4 DE : 0 CleavSite : 37 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.365 2.782 0.450 0.889 MesoH : -0.252 0.268 -0.310 0.257 MuHd_075 : 24.835 14.245 8.362 5.730 MuHd_095 : 35.347 26.103 8.525 9.357 MuHd_100 : 30.340 24.031 7.797 8.427 MuHd_105 : 32.201 25.052 8.775 8.511 Hmax_075 : 16.400 20.800 6.681 4.357 Hmax_095 : 16.800 20.825 4.245 7.140 Hmax_100 : 16.100 19.300 6.186 6.760 Hmax_105 : 18.900 26.833 6.782 7.190 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4591 0.5409 DFMC : 0.6836 0.3164
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 536 PVX_116695 MVGASLGPPGRGSLSRLIRLVICVLTLCALSVQGRSESTEGHSKDLLYKYKLYGDIDEYAYYFLDIDIGTPEQRISLILD 80 TGSSSLSFPCAGCKNCGVHMENPFNLNNSKTSSILYCENEECPFKLNCVKGKCEYMQSYCEGSQISGFYFSDVVSVVSYN 160 NERVTFRKLMGCHMHEESLFLYQQATGVLGMSLSKPQGIPTFVNLLFDNAPQLKQVFTICISENGGELIAGGYDPAYIVR 240 RGGSKSVSGQGSGPVSESLSESGEDPQVALREAEKVVWENVTRKYYYYIKVRGLDMFGTNMMSSSKGLEMLVDSGSTFTH 320 IPEDLYNKLNYFFDILCIQDMNNAYDVNKRLKMTNESFNNPLVQFDDFRKSLKSIIAKENMCVKIVDGVQCWKYLEGLPD 400 LFVTLSNNYKMKWQPHSYLYKKESFWCKGIEKQVNNKPILGLTFFKNRQVIFDIQKNRIGFVDANCPSHPTHTRPRTYNE 480 YKRKDNIFLKIPFFYLYSLFVVFALSVLLSLVFYVRRLYHMEYSPLPSEGKAPADA 560 ..................P............................................................. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_116695 11 SLGPPGR|GS 0.082 . PVX_116695 16 GRGSLSR|LI 0.121 . PVX_116695 19 SLSRLIR|LV 0.515 *ProP* PVX_116695 35 ALSVQGR|SE 0.259 . PVX_116695 44 STEGHSK|DL 0.066 . PVX_116695 49 SKDLLYK|YK 0.064 . PVX_116695 51 DLLYKYK|LY 0.079 . PVX_116695 74 IGTPEQR|IS 0.072 . PVX_116695 94 FPCAGCK|NC 0.068 . PVX_116695 110 FNLNNSK|TS 0.059 . PVX_116695 125 NEECPFK|LN 0.062 . PVX_116695 130 FKLNCVK|GK 0.065 . PVX_116695 132 LNCVKGK|CE 0.074 . PVX_116695 163 VSYNNER|VT 0.091 . PVX_116695 167 NERVTFR|KL 0.113 . PVX_116695 168 ERVTFRK|LM 0.107 . PVX_116695 195 LGMSLSK|PQ 0.059 . PVX_116695 214 DNAPQLK|QV 0.087 . PVX_116695 240 DPAYIVR|RG 0.086 . PVX_116695 241 PAYIVRR|GG 0.195 . PVX_116695 245 VRRGGSK|SV 0.162 . PVX_116695 271 DPQVALR|EA 0.132 . PVX_116695 275 ALREAEK|VV 0.071 . PVX_116695 283 VWENVTR|KY 0.081 . PVX_116695 284 WENVTRK|YY 0.099 . PVX_116695 290 KYYYYIK|VR 0.059 . PVX_116695 292 YYYIKVR|GL 0.109 . PVX_116695 306 NMMSSSK|GL 0.072 . PVX_116695 328 PEDLYNK|LN 0.051 . PVX_116695 349 NAYDVNK|RL 0.062 . PVX_116695 350 AYDVNKR|LK 0.147 . PVX_116695 352 DVNKRLK|MT 0.076 . PVX_116695 369 VQFDDFR|KS 0.079 . PVX_116695 370 QFDDFRK|SL 0.102 . PVX_116695 373 DFRKSLK|SI 0.117 . PVX_116695 378 LKSIIAK|EN 0.074 . PVX_116695 384 KENMCVK|IV 0.102 . PVX_116695 393 DGVQCWK|YL 0.067 . PVX_116695 410 TLSNNYK|MK 0.072 . PVX_116695 412 SNNYKMK|WQ 0.078 . PVX_116695 421 PHSYLYK|KE 0.068 . PVX_116695 422 HSYLYKK|ES 0.101 . PVX_116695 428 KESFWCK|GI 0.116 . PVX_116695 432 WCKGIEK|QV 0.069 . PVX_116695 437 EKQVNNK|PI 0.061 . PVX_116695 446 LGLTFFK|NR 0.060 . PVX_116695 448 LTFFKNR|QV 0.104 . PVX_116695 456 VIFDIQK|NR 0.054 . PVX_116695 458 FDIQKNR|IG 0.081 . PVX_116695 474 SHPTHTR|PR 0.083 . PVX_116695 476 PTHTRPR|TY 0.089 . PVX_116695 482 RTYNEYK|RK 0.068 . PVX_116695 483 TYNEYKR|KD 0.167 . PVX_116695 484 YNEYKRK|DN 0.092 . PVX_116695 490 KDNIFLK|IP 0.067 . PVX_116695 516 SLVFYVR|RL 0.090 . PVX_116695 517 LVFYVRR|LY 0.120 . PVX_116695 531 PLPSEGK|AP 0.062 . ____________________________^_________________

  • Fasta :-

    >PVX_116695 ATGGTCGGAGCGAGCTTGGGGCCCCCCGGTCGCGGCTCCCTCTCCCGTCTCATCCGTCTA GTCATCTGTGTGTTAACCCTATGTGCGTTGAGTGTACAGGGCAGAAGCGAGTCAACGGAG GGTCACAGCAAGGACCTCCTCTACAAGTACAAGCTGTATGGAGATATAGACGAATATGCC TACTACTTTCTAGATATTGATATAGGGACCCCGGAGCAAAGAATTTCCCTCATTTTGGAC ACGGGCTCATCCTCCTTGAGCTTCCCCTGTGCAGGATGCAAGAATTGTGGGGTTCATATG GAGAACCCCTTTAACCTTAATAACTCCAAAACGTCTTCCATTTTATATTGCGAAAATGAG GAGTGTCCTTTTAAGTTAAATTGTGTTAAGGGGAAATGTGAGTACATGCAGTCCTACTGT GAGGGTTCCCAAATTAGTGGGTTCTACTTTTCAGATGTAGTTAGTGTGGTGTCTTATAAC AATGAGAGGGTTACTTTTAGGAAGCTGATGGGGTGCCACATGCACGAGGAGAGTCTGTTC CTGTACCAGCAGGCGACGGGCGTATTGGGGATGAGTCTTTCCAAACCGCAGGGAATCCCC ACGTTCGTCAATTTGCTTTTCGACAACGCCCCGCAGCTGAAGCAGGTGTTTACCATTTGC ATCTCCGAGAATGGGGGCGAGCTGATCGCGGGGGGGTACGACCCGGCGTATATCGTGCGG AGGGGGGGAAGCAAGTCGGTAAGCGGGCAGGGAAGCGGACCGGTAAGCGAGTCGTTAAGC GAGTCGGGGGAGGACCCACAGGTGGCCCTCCGAGAGGCGGAAAAAGTCGTCTGGGAAAAC GTGACGAGGAAGTACTACTACTACATCAAGGTGAGGGGGCTGGACATGTTCGGAACAAAC ATGATGAGCTCCAGCAAGGGGTTGGAGATGCTGGTGGATTCGGGGAGCACCTTCACTCAC ATCCCGGAGGACCTCTATAATAAGCTAAATTACTTTTTTGACATTTTGTGCATCCAAGAT ATGAATAACGCGTATGATGTGAATAAGCGATTGAAGATGACGAACGAGTCGTTTAACAAT CCGTTGGTCCAATTCGACGATTTTAGGAAGTCCCTGAAGAGTATCATCGCGAAGGAGAAC ATGTGCGTTAAGATCGTAGACGGGGTGCAGTGCTGGAAATACCTGGAGGGGCTGCCCGAT CTGTTTGTCACTCTCTCGAACAATTATAAAATGAAGTGGCAGCCACATTCGTATCTGTAC AAGAAGGAAAGCTTTTGGTGCAAGGGCATAGAGAAACAGGTGAATAACAAACCCATATTA GGGCTAACCTTTTTTAAAAACAGGCAAGTTATTTTTGACATTCAGAAGAACCGCATTGGA TTTGTTGATGCCAACTGTCCTTCTCACCCGACCCATACGAGACCGAGGACTTATAATGAG TACAAACGGAAGGATAATATTTTTTTGAAAATTCCTTTTTTTTACCTGTATAGCCTGTTT GTCGTCTTCGCCCTGAGCGTGCTGCTCTCCCTGGTGTTCTACGTCAGGCGCCTCTACCAC ATGGAGTACAGCCCCCTCCCCTCCGAGGGCAAGGCGCCCGCGGATGCGTAG
  • Download Fasta

  • Fasta :-

    MVGASLGPPGRGSLSRLIRLVICVLTLCALSVQGRSESTEGHSKDLLYKYKLYGDIDEYA YYFLDIDIGTPEQRISLILDTGSSSLSFPCAGCKNCGVHMENPFNLNNSKTSSILYCENE ECPFKLNCVKGKCEYMQSYCEGSQISGFYFSDVVSVVSYNNERVTFRKLMGCHMHEESLF LYQQATGVLGMSLSKPQGIPTFVNLLFDNAPQLKQVFTICISENGGELIAGGYDPAYIVR RGGSKSVSGQGSGPVSESLSESGEDPQVALREAEKVVWENVTRKYYYYIKVRGLDMFGTN MMSSSKGLEMLVDSGSTFTHIPEDLYNKLNYFFDILCIQDMNNAYDVNKRLKMTNESFNN PLVQFDDFRKSLKSIIAKENMCVKIVDGVQCWKYLEGLPDLFVTLSNNYKMKWQPHSYLY KKESFWCKGIEKQVNNKPILGLTFFKNRQVIFDIQKNRIGFVDANCPSHPTHTRPRTYNE YKRKDNIFLKIPFFYLYSLFVVFALSVLLSLVFYVRRLYHMEYSPLPSEGKAPADA

  • title: catalytic residue
  • coordinates: D80,D313
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_116695371 SDFRKSLKSI0.996unspPVX_116695371 SDFRKSLKSI0.996unspPVX_116695371 SDFRKSLKSI0.996unspPVX_11669538 SGRSESTEGH0.994unspPVX_116695262 SSLSESGEDP0.997unsp
PVX_116695      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India