• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

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_ID
Prediction
OTHER
SP
mTP
CS_Position
PVX_118405 OTHER 0.999998 0.000001 0.000001
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >PVX_118405 MEEVRKRVERGKEKIKQIGKEIHQFDLKKSVEKIFVKKGKEKKLSDMLFLVQYSLKYKNV CKWPNYNDLFVINCNINDNFKSMLQKNGGFVHHYKKVTPDGGADSTPTMNQGRETTLGGS NQSGTANRNAEGDAPQTGEKQIDANSENGLSSKTNKPRSGADRGGQIYPEGTPLTKGELP QNSPSEKHSPNNPPPDNSLPNSALIKKESKFVTHFNDDISPYDKIKLQLFMYFVLNNYRV KILVDALSALNRPINVIYINCPNNKEQKKTFFQKVGSFFTPPYKVGDVFVNNKNNYQPKS KENCSCSELSPIRYSNNPTTAPSKERKSNYVGGYNPISNTIWLCSNNINSYYKLKYILTH ELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCSYFNSKYFSPDHDVFTNFKSPSISA TPKNKCIYNNVYSSLNQYKPCANNTHQFINHVFEKCLHDYWPFMCSPEQDSKYKPSKIFK KDS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_118405.fa Sequence name : PVX_118405 Sequence length : 483 VALUES OF COMPUTED PARAMETERS Coef20 : 3.423 CoefTot : 0.000 ChDiff : 22 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.229 1.071 -0.171 0.364 MesoH : -0.931 0.028 -0.510 0.111 MuHd_075 : 14.295 13.601 5.616 4.464 MuHd_095 : 42.388 27.048 12.760 8.205 MuHd_100 : 52.101 34.132 15.435 10.220 MuHd_105 : 50.992 33.273 14.809 10.079 Hmax_075 : -19.717 2.333 -6.378 0.723 Hmax_095 : -4.900 9.000 -1.647 2.240 Hmax_100 : 7.000 15.000 0.931 4.620 Hmax_105 : -4.638 9.187 -1.807 1.855 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8499 0.1501 DFMC : 0.9099 0.0901
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 483 PVX_118405 MEEVRKRVERGKEKIKQIGKEIHQFDLKKSVEKIFVKKGKEKKLSDMLFLVQYSLKYKNVCKWPNYNDLFVINCNINDNF 80 KSMLQKNGGFVHHYKKVTPDGGADSTPTMNQGRETTLGGSNQSGTANRNAEGDAPQTGEKQIDANSENGLSSKTNKPRSG 160 ADRGGQIYPEGTPLTKGELPQNSPSEKHSPNNPPPDNSLPNSALIKKESKFVTHFNDDISPYDKIKLQLFMYFVLNNYRV 240 KILVDALSALNRPINVIYINCPNNKEQKKTFFQKVGSFFTPPYKVGDVFVNNKNNYQPKSKENCSCSELSPIRYSNNPTT 320 APSKERKSNYVGGYNPISNTIWLCSNNINSYYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCSYFNS 400 KYFSPDHDVFTNFKSPSISATPKNKCIYNNVYSSLNQYKPCANNTHQFINHVFEKCLHDYWPFMCSPEQDSKYKPSKIFK 480 KDS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_118405 5 --MEEVR|KR 0.069 . PVX_118405 6 -MEEVRK|RV 0.101 . PVX_118405 7 MEEVRKR|VE 0.187 . PVX_118405 10 VRKRVER|GK 0.480 . PVX_118405 12 KRVERGK|EK 0.079 . PVX_118405 14 VERGKEK|IK 0.066 . PVX_118405 16 RGKEKIK|QI 0.109 . PVX_118405 20 KIKQIGK|EI 0.064 . PVX_118405 28 IHQFDLK|KS 0.058 . PVX_118405 29 HQFDLKK|SV 0.307 . PVX_118405 33 LKKSVEK|IF 0.067 . PVX_118405 37 VEKIFVK|KG 0.057 . PVX_118405 38 EKIFVKK|GK 0.171 . PVX_118405 40 IFVKKGK|EK 0.068 . PVX_118405 42 VKKGKEK|KL 0.086 . PVX_118405 43 KKGKEKK|LS 0.115 . PVX_118405 56 LVQYSLK|YK 0.063 . PVX_118405 58 QYSLKYK|NV 0.088 . PVX_118405 62 KYKNVCK|WP 0.061 . PVX_118405 81 NINDNFK|SM 0.081 . PVX_118405 86 FKSMLQK|NG 0.079 . PVX_118405 95 GFVHHYK|KV 0.089 . PVX_118405 96 FVHHYKK|VT 0.122 . PVX_118405 113 PTMNQGR|ET 0.104 . PVX_118405 128 QSGTANR|NA 0.125 . PVX_118405 140 APQTGEK|QI 0.069 . PVX_118405 153 ENGLSSK|TN 0.059 . PVX_118405 156 LSSKTNK|PR 0.091 . PVX_118405 158 SKTNKPR|SG 0.177 . PVX_118405 163 PRSGADR|GG 0.127 . PVX_118405 176 EGTPLTK|GE 0.056 . PVX_118405 187 QNSPSEK|HS 0.071 . PVX_118405 206 PNSALIK|KE 0.076 . PVX_118405 207 NSALIKK|ES 0.091 . PVX_118405 210 LIKKESK|FV 0.086 . PVX_118405 224 DISPYDK|IK 0.065 . PVX_118405 226 SPYDKIK|LQ 0.062 . PVX_118405 239 FVLNNYR|VK 0.062 . PVX_118405 241 LNNYRVK|IL 0.077 . PVX_118405 252 ALSALNR|PI 0.107 . PVX_118405 265 INCPNNK|EQ 0.065 . PVX_118405 268 PNNKEQK|KT 0.075 . PVX_118405 269 NNKEQKK|TF 0.141 . PVX_118405 274 KKTFFQK|VG 0.063 . PVX_118405 284 FFTPPYK|VG 0.056 . PVX_118405 293 DVFVNNK|NN 0.057 . PVX_118405 299 KNNYQPK|SK 0.113 . PVX_118405 301 NYQPKSK|EN 0.063 . PVX_118405 313 SELSPIR|YS 0.078 . PVX_118405 324 PTTAPSK|ER 0.054 . PVX_118405 326 TAPSKER|KS 0.100 . PVX_118405 327 APSKERK|SN 0.247 . PVX_118405 353 NINSYYK|LK 0.063 . PVX_118405 355 NSYYKLK|YI 0.083 . PVX_118405 370 HAFDFAR|AN 0.110 . PVX_118405 387 IACSEIR|AY 0.099 . PVX_118405 401 CSYFNSK|YF 0.074 . PVX_118405 414 DVFTNFK|SP 0.068 . PVX_118405 423 SISATPK|NK 0.075 . PVX_118405 425 SATPKNK|CI 0.070 . PVX_118405 439 SSLNQYK|PC 0.074 . PVX_118405 455 INHVFEK|CL 0.094 . PVX_118405 472 SPEQDSK|YK 0.062 . PVX_118405 474 EQDSKYK|PS 0.064 . PVX_118405 477 SKYKPSK|IF 0.065 . PVX_118405 480 KPSKIFK|KD 0.084 . PVX_118405 481 PSKIFKK|DS 0.159 . ____________________________^_________________
  • Fasta :-

    >PVX_118405 ATGGAAGAGGTACGCAAGAGGGTGGAACGAGGAAAGGAAAAAATTAAACAAATTGGTAAA GAAATCCACCAATTTGATTTAAAAAAGAGTGTAGAAAAAATTTTTGTAAAAAAAGGAAAA GAAAAGAAACTCAGTGACATGTTATTTTTGGTACAATACTCACTGAAATATAAAAATGTG TGCAAGTGGCCGAACTATAATGACCTCTTCGTGATCAATTGTAACATAAATGATAATTTC AAATCTATGCTTCAAAAAAATGGGGGATTTGTTCACCACTATAAAAAGGTCACGCCTGAT GGAGGGGCAGATAGCACCCCCACGATGAACCAAGGCAGGGAAACCACACTCGGGGGTAGC AATCAAAGCGGCACGGCGAATCGCAACGCTGAGGGGGATGCCCCCCAGACAGGAGAGAAG CAAATAGACGCAAATTCGGAGAATGGCTTGTCGAGCAAGACTAACAAACCACGGAGTGGC GCAGACAGGGGAGGGCAAATTTACCCCGAGGGGACACCTTTAACGAAAGGGGAACTGCCA CAGAACTCCCCTTCAGAGAAGCACTCCCCGAATAACCCCCCTCCAGATAACTCCCTGCCA AACAGCGCACTCATAAAAAAGGAAAGCAAATTTGTAACCCACTTTAATGACGACATAAGT CCGTACGACAAAATAAAGTTGCAACTTTTTATGTACTTCGTGTTGAACAATTATAGAGTT AAAATTCTAGTGGACGCCTTATCTGCGTTAAATCGCCCAATTAACGTTATCTACATAAAT TGCCCTAATAATAAAGAGCAGAAGAAAACATTTTTTCAAAAGGTGGGGAGCTTCTTCACC CCCCCGTACAAAGTGGGTGATGTTTTTGTGAATAATAAAAATAATTATCAACCAAAGAGC AAGGAAAATTGCTCGTGCTCGGAATTGTCCCCCATTAGGTATAGTAACAACCCAACCACT GCTCCTTCCAAGGAAAGAAAATCAAATTACGTAGGTGGGTACAACCCTATAAGCAACACC ATTTGGCTGTGTTCAAATAATATTAACAGTTATTATAAGCTCAAATATATACTGACGCAT GAACTTATACATGCCTTTGATTTTGCAAGGGCAAATATAGACATGTATAATTGCCACCAT ATTGCTTGTTCCGAAATAAGAGCCTACAATATGAGCAATCAGTGCAGCTATTTTAACAGC AAGTATTTTTCCCCCGACCATGATGTCTTTACTAATTTTAAAAGCCCCTCAATTAGCGCT ACCCCAAAAAATAAATGCATATATAATAATGTGTATTCGTCTCTCAACCAGTACAAGCCT TGCGCAAACAACACCCATCAGTTTATAAATCACGTCTTCGAGAAATGCCTGCACGATTAC TGGCCCTTCATGTGCTCTCCCGAACAGGACAGCAAGTATAAACCCTCCAAGATTTTTAAG AAGGATTCCTGA
  • Download Fasta
  • Fasta :-

    MEEVRKRVERGKEKIKQIGKEIHQFDLKKSVEKIFVKKGKEKKLSDMLFLVQYSLKYKNV CKWPNYNDLFVINCNINDNFKSMLQKNGGFVHHYKKVTPDGGADSTPTMNQGRETTLGGS NQSGTANRNAEGDAPQTGEKQIDANSENGLSSKTNKPRSGADRGGQIYPEGTPLTKGELP QNSPSEKHSPNNPPPDNSLPNSALIKKESKFVTHFNDDISPYDKIKLQLFMYFVLNNYRV KILVDALSALNRPINVIYINCPNNKEQKKTFFQKVGSFFTPPYKVGDVFVNNKNNYQPKS KENCSCSELSPIRYSNNPTTAPSKERKSNYVGGYNPISNTIWLCSNNINSYYKLKYILTH ELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCSYFNSKYFSPDHDVFTNFKSPSISA TPKNKCIYNNVYSSLNQYKPCANNTHQFINHVFEKCLHDYWPFMCSPEQDSKYKPSKIFK KDS

    No Results
    No Results
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ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
PVX_118405 T 175 0.506 0.089 PVX_118405 S 185 0.506 0.036
Showing 1 to 1 of 1 rows
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ID
Site
Position
Gscore
Iscore
ID
Site
Position
Gscore
Iscore
PVX_118405 T 175 0.506 0.089 PVX_118405 S 185 0.506 0.036
Showing 1 to 1 of 1 rows
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
PVX_118405 189 S SEKHSPNNP 0.994 unsp PVX_118405 189 S SEKHSPNNP 0.994 unsp PVX_118405 189 S SEKHSPNNP 0.994 unsp PVX_118405 220 S NDDISPYDK 0.997 unsp PVX_118405 328 S KERKSNYVG 0.993 unsp PVX_118405 159 S NKPRSGADR 0.996 unsp PVX_118405 185 S QNSPSEKHS 0.99 unsp
Showing 1 to 1 of 1 rows
PVX_118405      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India