PVX_119690 | aspartyl proteinase, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_119690SP0.0015250.9983600.000115CS pos: 24-25. ILS-LP. Pr: 0.8746
No Results

  • Fasta :-

    >PVX_119690 MGRALLLAPLFTLLVALLPPPILSLPPLGALKSGGGKQNLSNAPPLEDTSKKGLLLTEIK LQNRFKNDIKGFIRNVRSFHDSIEDRTPNSLLYVQEDLLNFHNSQFIGDIQIGTPPQSFR VVFDTGSSNFALPSTKCVKGGCASHKKFNPDESRTYARQLKGNKESIYTYIQYGTGRSIL EHGYDDVNLKGLRIKHQSVGLAIEESLHPFSDLPFDGIVGLGFSDPDFSFKKGYGTPLIE TIKKQNLLKRNIFSFYVPKKLREPGSITFGRANSKYALEGRQVEWFPVISIYFWEINLID VQLSGKNLNMCENRKCRAAIDTGSSLLTGPSSLMQPLIEKLDLRKDCSNKSSLPNISFIL KNVEGKEVKFAFTPDDYILEETDEEDNSVQCVIGIMSLDVPAPRGPIFVFGNVFIRKYYS IFDNDHKLVGLIEARHDW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_119690.fa Sequence name : PVX_119690 Sequence length : 438 VALUES OF COMPUTED PARAMETERS Coef20 : 4.334 CoefTot : -1.039 ChDiff : 4 ZoneTo : 46 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.006 2.194 0.323 0.781 MesoH : -0.674 0.244 -0.435 0.193 MuHd_075 : 25.837 17.010 8.498 6.395 MuHd_095 : 11.395 18.883 3.636 4.567 MuHd_100 : 10.763 14.633 2.861 3.488 MuHd_105 : 17.157 13.537 4.154 3.758 Hmax_075 : 10.850 8.750 1.650 4.218 Hmax_095 : 11.113 26.688 4.580 8.050 Hmax_100 : 18.500 21.300 4.255 7.620 Hmax_105 : 19.900 22.983 -1.638 7.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8361 0.1639 DFMC : 0.8638 0.1362
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 438 PVX_119690 MGRALLLAPLFTLLVALLPPPILSLPPLGALKSGGGKQNLSNAPPLEDTSKKGLLLTEIKLQNRFKNDIKGFIRNVRSFH 80 DSIEDRTPNSLLYVQEDLLNFHNSQFIGDIQIGTPPQSFRVVFDTGSSNFALPSTKCVKGGCASHKKFNPDESRTYARQL 160 KGNKESIYTYIQYGTGRSILEHGYDDVNLKGLRIKHQSVGLAIEESLHPFSDLPFDGIVGLGFSDPDFSFKKGYGTPLIE 240 TIKKQNLLKRNIFSFYVPKKLREPGSITFGRANSKYALEGRQVEWFPVISIYFWEINLIDVQLSGKNLNMCENRKCRAAI 320 DTGSSLLTGPSSLMQPLIEKLDLRKDCSNKSSLPNISFILKNVEGKEVKFAFTPDDYILEETDEEDNSVQCVIGIMSLDV 400 PAPRGPIFVFGNVFIRKYYSIFDNDHKLVGLIEARHDW 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................P... 320 ................................................................................ 400 ...................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PVX_119690 3 ----MGR|AL 0.079 . PVX_119690 32 PPLGALK|SG 0.079 . PVX_119690 37 LKSGGGK|QN 0.062 . PVX_119690 51 PLEDTSK|KG 0.054 . PVX_119690 52 LEDTSKK|GL 0.093 . PVX_119690 60 LLLTEIK|LQ 0.055 . PVX_119690 64 EIKLQNR|FK 0.092 . PVX_119690 66 KLQNRFK|ND 0.075 . PVX_119690 70 RFKNDIK|GF 0.067 . PVX_119690 74 DIKGFIR|NV 0.100 . PVX_119690 77 GFIRNVR|SF 0.481 . PVX_119690 86 HDSIEDR|TP 0.089 . PVX_119690 120 TPPQSFR|VV 0.180 . PVX_119690 136 FALPSTK|CV 0.075 . PVX_119690 139 PSTKCVK|GG 0.065 . PVX_119690 146 GGCASHK|KF 0.073 . PVX_119690 147 GCASHKK|FN 0.131 . PVX_119690 154 FNPDESR|TY 0.085 . PVX_119690 158 ESRTYAR|QL 0.121 . PVX_119690 161 TYARQLK|GN 0.171 . PVX_119690 164 RQLKGNK|ES 0.054 . PVX_119690 177 IQYGTGR|SI 0.138 . PVX_119690 190 YDDVNLK|GL 0.066 . PVX_119690 193 VNLKGLR|IK 0.080 . PVX_119690 195 LKGLRIK|HQ 0.084 . PVX_119690 231 DPDFSFK|KG 0.060 . PVX_119690 232 PDFSFKK|GY 0.123 . PVX_119690 243 PLIETIK|KQ 0.055 . PVX_119690 244 LIETIKK|QN 0.091 . PVX_119690 249 KKQNLLK|RN 0.061 . PVX_119690 250 KQNLLKR|NI 0.181 . PVX_119690 259 FSFYVPK|KL 0.066 . PVX_119690 260 SFYVPKK|LR 0.116 . PVX_119690 262 YVPKKLR|EP 0.092 . PVX_119690 271 GSITFGR|AN 0.135 . PVX_119690 275 FGRANSK|YA 0.076 . PVX_119690 281 KYALEGR|QV 0.141 . PVX_119690 306 DVQLSGK|NL 0.063 . PVX_119690 314 LNMCENR|KC 0.120 . PVX_119690 315 NMCENRK|CR 0.076 . PVX_119690 317 CENRKCR|AA 0.505 *ProP* PVX_119690 340 MQPLIEK|LD 0.053 . PVX_119690 344 IEKLDLR|KD 0.074 . PVX_119690 345 EKLDLRK|DC 0.079 . PVX_119690 350 RKDCSNK|SS 0.079 . PVX_119690 361 NISFILK|NV 0.097 . PVX_119690 366 LKNVEGK|EV 0.084 . PVX_119690 369 VEGKEVK|FA 0.074 . PVX_119690 404 LDVPAPR|GP 0.091 . PVX_119690 416 FGNVFIR|KY 0.094 . PVX_119690 417 GNVFIRK|YY 0.107 . PVX_119690 427 IFDNDHK|LV 0.076 . PVX_119690 435 VGLIEAR|HD 0.081 . ____________________________^_________________

  • Fasta :-

    >PVX_119690 CGGCGAGCAAAGGGCCAGCCGTTTGCGCCCACCACGTTGCTGTCACGTTGCTGTCACGTC GCTTCTGCATCACTGCCACGTCGCTTCTGCATCACTGCCACGCTACTTCTGCACCACTAT TGTGTTGCCCTTTTCGTTTGAGCCAACTGCCTGACCGCCGAGTCCCCCCAGGAGAGACGG CGCAAAATGGGGCGAGCACTCCTTCTTGCCCCCCTGTTCACCCTCTTGGTGGCTTTGCTG CCGCCCCCAATTTTGAGTCTACCCCCACTTGGCGCCCTTAAAAGTGGCGGGGGGAAGCAA AACCTAAGTAACGCTCCCCCCCTGGAGGACACCAGCAAGAAGGGTCTCCTCCTCACCGAA ATAAAATTACAAAACAGATTTAAAAATGATATAAAGGGGTTCATAAGAAACGTGAGATCC TTTCACGACAGCATAGAGGATAGGACCCCCAACTCGTTGCTGTACGTGCAGGAGGATTTG CTCAACTTTCACAACAGCCAGTTTATTGGGGACATACAGATCGGCACTCCTCCGCAAAGC TTTCGGGTCGTGTTCGACACGGGCTCCAGCAACTTCGCCCTCCCCTCGACGAAGTGTGTC AAAGGAGGCTGTGCGTCCCACAAGAAATTCAACCCGGACGAGTCCAGGACGTACGCGCGG CAGTTGAAAGGCAATAAGGAGTCCATTTACACCTACATCCAGTACGGGACGGGAAGGAGC ATCCTTGAGCACGGATATGACGACGTCAATTTAAAGGGACTGAGGATCAAACATCAGAGT GTCGGGCTAGCTATAGAAGAGTCTTTACACCCCTTTTCCGATTTACCCTTCGATGGGATT GTTGGCCTGGGATTTTCAGACCCGGACTTCAGCTTTAAGAAAGGATACGGGACGCCCTTA ATAGAGACGATAAAAAAGCAGAACCTGCTGAAAAGGAACATCTTCTCTTTTTACGTGCCA AAGAAGTTGCGAGAGCCCGGCTCCATTACGTTCGGACGAGCCAACAGTAAATACGCCCTC GAAGGGAGGCAAGTTGAGTGGTTTCCCGTCATATCGATTTATTTCTGGGAAATTAACCTG ATAGACGTGCAACTCTCCGGCAAGAATTTAAATATGTGCGAAAATAGGAAATGTAGAGCG GCCATTGACACTGGGTCCAGTTTGCTAACCGGCCCATCCAGCCTGATGCAACCGCTGATA GAAAAACTGGACCTGCGGAAGGACTGCTCAAATAAGAGCAGCTTGCCAAATATTTCTTTC ATTTTAAAAAATGTCGAAGGGAAGGAGGTGAAGTTCGCTTTTACGCCGGATGACTACATC CTGGAGGAAACTGACGAGGAGGATAATTCTGTTCAGTGCGTGATCGGAATAATGTCGCTG GACGTCCCCGCGCCTCGCGGGCCCATCTTTGTCTTCGGCAACGTTTTCATAAGAAAGTAT TACTCTATATTTGACAATGACCATAAGCTCGTGGGCCTCATTGAAGCTCGGCACGACTGG TAA
  • Download Fasta

  • Fasta :-

    MGRALLLAPLFTLLVALLPPPILSLPPLGALKSGGGKQNLSNAPPLEDTSKKGLLLTEIK LQNRFKNDIKGFIRNVRSFHDSIEDRTPNSLLYVQEDLLNFHNSQFIGDIQIGTPPQSFR VVFDTGSSNFALPSTKCVKGGCASHKKFNPDESRTYARQLKGNKESIYTYIQYGTGRSIL EHGYDDVNLKGLRIKHQSVGLAIEESLHPFSDLPFDGIVGLGFSDPDFSFKKGYGTPLIE TIKKQNLLKRNIFSFYVPKKLREPGSITFGRANSKYALEGRQVEWFPVISIYFWEINLID VQLSGKNLNMCENRKCRAAIDTGSSLLTGPSSLMQPLIEKLDLRKDCSNKSSLPNISFIL KNVEGKEVKFAFTPDDYILEETDEEDNSVQCVIGIMSLDVPAPRGPIFVFGNVFIRKYYS IFDNDHKLVGLIEARHDW

  • title: inhibitor binding site
  • coordinates: D124,G126,S128,Y170,I171,Q172,I218
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_11969082 SSFHDSIEDR0.996unspPVX_119690420 SRKYYSIFDN0.995unsp
PVX_119690      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India