PVX_122410 | 26S protease regulatory subunit 7, putative

_IDPredictionOTHERSPmTPCS_Position
PVX_122410OTHER0.9999280.0000330.000039
No Results

  • Fasta :-

    >PVX_122410 MDEDAPTQSKPLDDEDINILKSYGSGPYSKSIKKVESDISGLVTSINKLCGVRESDTGLC LPNQWDLQLDKQMLNEEQPLQVARCTKIINGDTDQTKYIINVKQIAKFVVGLGDKVAPSD IEEGMRVGVDRTKYKIQILLPPKIDPTVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEM PLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEG ARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRG NIKVLMATNRPDTLDSALVRPGRIDRKIEFSLPDLEGRTHIFKIHANTMNMSRNVRFELL ARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKVIHGCKQFSATGKYMVYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_122410.fa Sequence name : PVX_122410 Sequence length : 420 VALUES OF COMPUTED PARAMETERS Coef20 : 2.663 CoefTot : 0.000 ChDiff : -1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.406 1.247 0.094 0.454 MesoH : -0.783 0.330 -0.349 0.172 MuHd_075 : 16.861 8.805 4.084 3.423 MuHd_095 : 20.288 15.700 6.142 3.832 MuHd_100 : 16.269 10.895 4.533 2.765 MuHd_105 : 12.244 4.757 2.382 1.635 Hmax_075 : -7.262 -0.613 -3.378 1.339 Hmax_095 : -9.625 0.612 -3.974 0.814 Hmax_100 : -13.100 -3.800 -5.513 -0.010 Hmax_105 : -13.100 -3.800 -5.000 -0.163 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9918 0.0082 DFMC : 0.9945 0.0055
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 420 PVX_122410 MDEDAPTQSKPLDDEDINILKSYGSGPYSKSIKKVESDISGLVTSINKLCGVRESDTGLCLPNQWDLQLDKQMLNEEQPL 80 QVARCTKIINGDTDQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPTVTMMTVEEKPDIT 160 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEG 240 ARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVR 320 PGRIDRKIEFSLPDLEGRTHIFKIHANTMNMSRNVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAI 400 NKVIHGCKQFSATGKYMVYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_122410 10 DAPTQSK|PL 0.066 . PVX_122410 21 EDINILK|SY 0.085 . PVX_122410 30 GSGPYSK|SI 0.134 . PVX_122410 33 PYSKSIK|KV 0.094 . PVX_122410 34 YSKSIKK|VE 0.087 . PVX_122410 48 LVTSINK|LC 0.058 . PVX_122410 53 NKLCGVR|ES 0.088 . PVX_122410 71 WDLQLDK|QM 0.057 . PVX_122410 84 QPLQVAR|CT 0.122 . PVX_122410 87 QVARCTK|II 0.151 . PVX_122410 97 GDTDQTK|YI 0.074 . PVX_122410 103 KYIINVK|QI 0.064 . PVX_122410 107 NVKQIAK|FV 0.078 . PVX_122410 115 VVGLGDK|VA 0.054 . PVX_122410 126 DIEEGMR|VG 0.065 . PVX_122410 131 MRVGVDR|TK 0.130 . PVX_122410 133 VGVDRTK|YK 0.069 . PVX_122410 135 VDRTKYK|IQ 0.064 . PVX_122410 143 QILLPPK|ID 0.061 . PVX_122410 156 MMTVEEK|PD 0.063 . PVX_122410 168 NDIGGCK|EQ 0.057 . PVX_122410 173 CKEQLEK|LR 0.063 . PVX_122410 175 EQLEKLR|EV 0.093 . PVX_122410 187 PLLQPER|FV 0.119 . PVX_122410 197 LGIDPPK|GV 0.077 . PVX_122410 209 GPPGTGK|TL 0.062 . PVX_122410 214 GKTLTAR|AI 0.092 . PVX_122410 219 ARAIANR|TD 0.083 . PVX_122410 235 GSELVQK|YV 0.154 . PVX_122410 242 YVGEGAR|MV 0.138 . PVX_122410 245 EGARMVR|EL 0.264 . PVX_122410 252 ELFQMAK|SK 0.081 . PVX_122410 254 FQMAKSK|KA 0.080 . PVX_122410 255 QMAKSKK|AC 0.109 . PVX_122410 271 DAIGGSR|GD 0.087 . PVX_122410 284 GDHEVQR|TM 0.110 . PVX_122410 299 LDGFDNR|GN 0.125 . PVX_122410 303 DNRGNIK|VL 0.061 . PVX_122410 310 VLMATNR|PD 0.073 . PVX_122410 320 LDSALVR|PG 0.091 . PVX_122410 323 ALVRPGR|ID 0.312 . PVX_122410 326 RPGRIDR|KI 0.417 . PVX_122410 327 PGRIDRK|IE 0.072 . PVX_122410 338 LPDLEGR|TH 0.083 . PVX_122410 343 GRTHIFK|IH 0.064 . PVX_122410 353 NTMNMSR|NV 0.109 . PVX_122410 356 NMSRNVR|FE 0.206 . PVX_122410 362 RFELLAR|LC 0.071 . PVX_122410 373 STGSDIR|SV 0.274 . PVX_122410 385 AGMFAIR|AR 0.085 . PVX_122410 387 MFAIRAR|RK 0.112 . PVX_122410 388 FAIRARR|KT 0.379 . PVX_122410 389 AIRARRK|TI 0.091 . PVX_122410 394 RKTITEK|DL 0.070 . PVX_122410 402 LLLAINK|VI 0.058 . PVX_122410 408 KVIHGCK|QF 0.075 . PVX_122410 415 QFSATGK|YM 0.072 . ____________________________^_________________

  • Fasta :-

    >PVX_122410 AGCGAAAGGGGCACCAAACGCCGTAACGAAGGTAAATTTTTTTAATCGATTTTACTTTTT TCCCCTCTTGGTCAGATTGTACAAGTGTACACAAATTAAGGAGACTTTTCTTGTTCAGAG GAAATCCCCTTTTTTGAGTTTAATCCTCCCGCTGGCAAGTGTGCCTTTCCGTATGCGTGA GGTGAAAGTACGATTGCCTTGGGCTGAAGCCTCCGATCAAGCGCTTAACTGCCTCGTGTG GCGCGGCGTGTACGCGAAGCAGGGCCAACCCGCACATGTCACTTGCGCCACGTGTACGCA TGATTTTCTCGCGAATTGCCAAAGAGAATAAGATAAAAATATACATTCGAGTTCGGCGCT AACGGGTACAGTCAATCGAACGGATAGAGAGGGATAACTTAAAAAAAAACAAAAAAAATA AAACAAACGTATGTACAACTTTGCGAAAAAAGAAAAAAAAAAAATCCCAATCCGCTTCAA GCAACTGACACGGTTTACTTTTTCAATACAATTCCTACCTTTGGCCCTCTTTGTATGTCC TTGCCGAATCGACAATGGATGAGGACGCACCCACCCAGTCCAAGCCCCTGGATGATGAAG ATATAAACATCTTGAAATCTTACGGATCCGGGCCGTACTCAAAGAGCATCAAGAAGGTTG AGTCCGACATAAGCGGGTTAGTAACGAGCATCAACAAGCTTTGCGGAGTGAGAGAAAGCG ACACGGGGTTATGTCTGCCGAATCAATGGGATCTACAGTTAGATAAACAGATGCTGAATG AAGAGCAACCGCTGCAAGTAGCTAGATGTACAAAAATTATCAATGGAGATACGGACCAAA CAAAGTACATTATTAACGTTAAACAGATAGCGAAGTTTGTGGTAGGGTTAGGGGATAAGG TTGCACCAAGTGATATAGAAGAAGGGATGAGAGTAGGGGTAGATAGAACCAAATACAAAA TTCAAATTCTGCTACCTCCAAAGATAGACCCTACAGTCACTATGATGACAGTGGAAGAGA AGCCAGATATTACCTACAACGATATTGGTGGATGTAAAGAACAATTAGAAAAGTTAAGAG AAGTGGTAGAAATGCCTTTGCTGCAACCGGAAAGATTTGTAACTTTGGGAATAGATCCTC CTAAAGGGGTTCTACTGTATGGCCCCCCAGGTACGGGTAAAACTCTAACCGCTAGAGCTA TCGCCAATCGAACAGATGCCTGTTTCATATGTGTTATTGGTTCCGAACTTGTGCAGAAAT ATGTTGGTGAAGGTGCCAGAATGGTGAGAGAATTATTTCAAATGGCTAAGTCGAAAAAGG CGTGTATCCTATTTATTGATGAAGTAGATGCAATAGGAGGTTCTAGAGGAGACGAAAGTG CACATGGGGATCATGAAGTACAAAGAACCATGTTAGAAATTGTAAATCAGCTAGATGGGT TCGATAACAGAGGTAATATCAAAGTGCTAATGGCTACCAATAGGCCCGACACGTTAGATA GTGCATTAGTTAGACCGGGTAGAATTGACAGAAAGATAGAATTTAGTTTACCTGACCTTG AAGGTAGAACCCATATTTTTAAGATTCACGCGAATACTATGAATATGAGCAGAAATGTTA GATTCGAGCTGCTGGCTAGACTGTGCCCCAACAGCACCGGTTCTGATATTCGAAGTGTCT GCACAGAGGCAGGTATGTTTGCCATCAGGGCCAGAAGAAAAACCATCACCGAGAAGGACC TGCTCCTCGCAATAAACAAAGTCATACACGGTTGCAAGCAATTTTCGGCCACGGGAAAGT ATATGGTGTACAATTAG
  • Download Fasta

  • Fasta :-

    MDEDAPTQSKPLDDEDINILKSYGSGPYSKSIKKVESDISGLVTSINKLCGVRESDTGLC LPNQWDLQLDKQMLNEEQPLQVARCTKIINGDTDQTKYIINVKQIAKFVVGLGDKVAPSD IEEGMRVGVDRTKYKIQILLPPKIDPTVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEM PLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEG ARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRG NIKVLMATNRPDTLDSALVRPGRIDRKIEFSLPDLEGRTHIFKIHANTMNMSRNVRFELL ARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKVIHGCKQFSATGKYMVYN

  • title: ATP binding site
  • coordinates: P204,P205,G206,T207,G208,K209,T210,L211,D262,N309
No Results
No Results
IDSitePeptideScoreMethod
PVX_122410119 SKVAPSDIEE0.993unsp
PVX_122410      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India