PVX_203290 | unspecified product

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PVX_203290OTHER0.9999230.0000640.000013
No Results

  • Fasta :-

    >PVX_203290 MIQNELCDSETVLKCNSLDGKPQLDSFLNKDGLMLRTYGWIVKNAIGIIILIHGLNSHVR FSFLRHNVDIVGNEKAILKDENNYYVYKDSWVERFNKTGYSVYGIDLQGHGKSDGWENLK VNVKRFDDIAYDVIEYIQKIQEKSGKNENSCDAPPSGDNKSVTKKALPTYLIGQSMGGNV VLRTLQLIGKSKDEAKKKLNIKGCISLSGMISIERIIASPRSFKYKLFYLPFTRLFSFCF PRLRLINNMRYIKYQYMHDLYNYDKIRYKKGITYRFAYELLKAMDNLQKDMKHIPKDIPI LFIHSKDDTLCYYRGVVSFFSRLKNDNKELHILEDMEHMLTVEPGNENVLNKIMQWLSKL NPKRVTTKFKKKKKKKKNSKGQDNSTT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_203290.fa Sequence name : PVX_203290 Sequence length : 387 VALUES OF COMPUTED PARAMETERS Coef20 : 3.499 CoefTot : -0.289 ChDiff : 24 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.982 1.641 0.138 0.699 MesoH : -0.873 0.243 -0.431 0.141 MuHd_075 : 25.281 16.353 8.224 4.624 MuHd_095 : 5.870 7.486 2.004 2.610 MuHd_100 : 6.968 6.454 0.876 2.845 MuHd_105 : 11.258 11.561 3.592 3.853 Hmax_075 : 9.537 10.412 1.931 3.080 Hmax_095 : 0.263 6.037 -1.855 2.100 Hmax_100 : -0.500 8.500 -0.003 3.000 Hmax_105 : 8.283 14.000 0.970 4.363 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9166 0.0834 DFMC : 0.9680 0.0320
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 387 PVX_203290 MIQNELCDSETVLKCNSLDGKPQLDSFLNKDGLMLRTYGWIVKNAIGIIILIHGLNSHVRFSFLRHNVDIVGNEKAILKD 80 ENNYYVYKDSWVERFNKTGYSVYGIDLQGHGKSDGWENLKVNVKRFDDIAYDVIEYIQKIQEKSGKNENSCDAPPSGDNK 160 SVTKKALPTYLIGQSMGGNVVLRTLQLIGKSKDEAKKKLNIKGCISLSGMISIERIIASPRSFKYKLFYLPFTRLFSFCF 240 PRLRLINNMRYIKYQYMHDLYNYDKIRYKKGITYRFAYELLKAMDNLQKDMKHIPKDIPILFIHSKDDTLCYYRGVVSFF 320 SRLKNDNKELHILEDMEHMLTVEPGNENVLNKIMQWLSKLNPKRVTTKFKKKKKKKKNSKGQDNSTT 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_203290 14 DSETVLK|CN 0.061 . PVX_203290 21 CNSLDGK|PQ 0.066 . PVX_203290 30 LDSFLNK|DG 0.074 . PVX_203290 36 KDGLMLR|TY 0.096 . PVX_203290 43 TYGWIVK|NA 0.070 . PVX_203290 60 GLNSHVR|FS 0.099 . PVX_203290 65 VRFSFLR|HN 0.105 . PVX_203290 75 DIVGNEK|AI 0.060 . PVX_203290 79 NEKAILK|DE 0.059 . PVX_203290 88 NNYYVYK|DS 0.083 . PVX_203290 94 KDSWVER|FN 0.165 . PVX_203290 97 WVERFNK|TG 0.097 . PVX_203290 112 DLQGHGK|SD 0.089 . PVX_203290 120 DGWENLK|VN 0.054 . PVX_203290 124 NLKVNVK|RF 0.063 . PVX_203290 125 LKVNVKR|FD 0.325 . PVX_203290 139 VIEYIQK|IQ 0.065 . PVX_203290 143 IQKIQEK|SG 0.077 . PVX_203290 146 IQEKSGK|NE 0.061 . PVX_203290 160 PPSGDNK|SV 0.141 . PVX_203290 164 DNKSVTK|KA 0.065 . PVX_203290 165 NKSVTKK|AL 0.166 . PVX_203290 183 GGNVVLR|TL 0.107 . PVX_203290 190 TLQLIGK|SK 0.084 . PVX_203290 192 QLIGKSK|DE 0.070 . PVX_203290 196 KSKDEAK|KK 0.066 . PVX_203290 197 SKDEAKK|KL 0.102 . PVX_203290 198 KDEAKKK|LN 0.121 . PVX_203290 202 KKKLNIK|GC 0.065 . PVX_203290 215 GMISIER|II 0.070 . PVX_203290 221 RIIASPR|SF 0.150 . PVX_203290 224 ASPRSFK|YK 0.138 . PVX_203290 226 PRSFKYK|LF 0.081 . PVX_203290 234 FYLPFTR|LF 0.073 . PVX_203290 242 FSFCFPR|LR 0.072 . PVX_203290 244 FCFPRLR|LI 0.075 . PVX_203290 250 RLINNMR|YI 0.113 . PVX_203290 253 NNMRYIK|YQ 0.102 . PVX_203290 265 DLYNYDK|IR 0.062 . PVX_203290 267 YNYDKIR|YK 0.107 . PVX_203290 269 YDKIRYK|KG 0.062 . PVX_203290 270 DKIRYKK|GI 0.334 . PVX_203290 275 KKGITYR|FA 0.167 . PVX_203290 282 FAYELLK|AM 0.061 . PVX_203290 289 AMDNLQK|DM 0.069 . PVX_203290 292 NLQKDMK|HI 0.072 . PVX_203290 296 DMKHIPK|DI 0.078 . PVX_203290 306 ILFIHSK|DD 0.065 . PVX_203290 314 DTLCYYR|GV 0.081 . PVX_203290 322 VVSFFSR|LK 0.091 . PVX_203290 324 SFFSRLK|ND 0.063 . PVX_203290 328 RLKNDNK|EL 0.075 . PVX_203290 352 NENVLNK|IM 0.060 . PVX_203290 359 IMQWLSK|LN 0.064 . PVX_203290 363 LSKLNPK|RV 0.081 . PVX_203290 364 SKLNPKR|VT 0.162 . PVX_203290 368 PKRVTTK|FK 0.075 . PVX_203290 370 RVTTKFK|KK 0.067 . PVX_203290 371 VTTKFKK|KK 0.091 . PVX_203290 372 TTKFKKK|KK 0.112 . PVX_203290 373 TKFKKKK|KK 0.130 . PVX_203290 374 KFKKKKK|KK 0.115 . PVX_203290 375 FKKKKKK|KK 0.133 . PVX_203290 376 KKKKKKK|KN 0.240 . PVX_203290 377 KKKKKKK|NS 0.173 . PVX_203290 380 KKKKNSK|GQ 0.076 . ____________________________^_________________

  • Fasta :-

    >PVX_203290 ATGATACAAAATGAATTATGTGATAGTGAAACGGTCTTAAAATGTAACAGTCTCGATGGA AAACCACAACTTGATTCATTTCTGAATAAGGATGGTTTAATGTTAAGGACATACGGGTGG ATAGTAAAAAACGCAATAGGTATTATCATTTTAATTCATGGTTTAAATTCACATGTAAGA TTTTCATTCCTAAGACACAACGTAGATATAGTGGGTAACGAGAAGGCCATATTGAAAGAC GAAAATAATTATTACGTTTACAAGGATAGCTGGGTAGAGCGATTTAATAAGACTGGATAT TCAGTATATGGAATAGACTTGCAAGGTCACGGGAAATCTGATGGATGGGAAAATTTAAAG GTTAACGTAAAACGTTTTGATGACATAGCATACGATGTGATAGAGTATATTCAGAAAATT CAAGAGAAATCAGGGAAGAATGAAAATTCGTGTGATGCCCCACCATCTGGTGATAATAAG AGTGTTACTAAAAAAGCCCTTCCCACGTACTTAATTGGTCAATCCATGGGAGGGAATGTC GTATTAAGGACATTGCAATTGATAGGGAAATCGAAAGATGAGGCCAAGAAAAAATTAAAT ATTAAAGGTTGTATTTCGTTATCGGGGATGATTTCCATCGAGAGAATAATTGCGTCACCA CGTTCGTTTAAGTATAAACTTTTTTATTTGCCTTTTACAAGACTATTTTCCTTTTGTTTT CCAAGGTTAAGGCTTATCAATAATATGCGCTATATAAAGTACCAGTATATGCACGACCTT TATAATTATGATAAAATTAGATACAAAAAAGGAATAACGTACAGATTTGCGTACGAGCTT TTAAAAGCAATGGATAATTTGCAAAAAGATATGAAGCATATTCCTAAGGATATTCCCATT TTATTTATTCATTCCAAGGATGACACTTTGTGTTATTATAGAGGCGTTGTGTCATTTTTC AGTAGACTAAAAAATGATAATAAAGAATTGCACATTCTTGAAGACATGGAGCATATGTTA ACTGTGGAGCCGGGGAATGAAAACGTTTTAAATAAAATTATGCAATGGCTTTCGAAGCTA AACCCCAAAAGGGTAACTACGAAATTTAAAAAAAAAAAGAAGAAAAAAAAAAATTCCAAG GGTCAAGACAATTCCACCAC
  • Download Fasta

  • Fasta :-

    MIQNELCDSETVLKCNSLDGKPQLDSFLNKDGLMLRTYGWIVKNAIGIIILIHGLNSHVR FSFLRHNVDIVGNEKAILKDENNYYVYKDSWVERFNKTGYSVYGIDLQGHGKSDGWENLK VNVKRFDDIAYDVIEYIQKIQEKSGKNENSCDAPPSGDNKSVTKKALPTYLIGQSMGGNV VLRTLQLIGKSKDEAKKKLNIKGCISLSGMISIERIIASPRSFKYKLFYLPFTRLFSFCF PRLRLINNMRYIKYQYMHDLYNYDKIRYKKGITYRFAYELLKAMDNLQKDMKHIPKDIPI LFIHSKDDTLCYYRGVVSFFSRLKNDNKELHILEDMEHMLTVEPGNENVLNKIMQWLSKL NPKRVTTKFKKKKKKKKNSKGQDNSTT

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PVX_203290305 SLFIHSKDDT0.991unsp
PVX_203290      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India