PVX_239290 | unspecified product

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PVX_239290OTHER0.9995930.0002810.000126
No Results

  • Fasta :-

    >PVX_239290 MAQDIKIMNLTKSSLEALNRNQMLSKKSSRKILKICMYAILTFAMCGVVLICLTAMSNSD GSLTQSGSHNQSGSLKGLSSTPGDGEILNKAEIETLRFIFSNYPHGNRDPTGDDVEKPAD AALPNEEDQKVKIADAGKHIKLMKQYNEIVADMSEDNKEQLAKMLRELLKKKINERKKKR EDPNGNNEEGKEVINISVPSFNYKRVSANQDDSDDEEEVSVAQIEGLFVNLKYASKFFNF MNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_239290.fa Sequence name : PVX_239290 Sequence length : 285 VALUES OF COMPUTED PARAMETERS Coef20 : 4.223 CoefTot : -0.014 ChDiff : 6 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.406 2.488 0.645 0.799 MesoH : -0.130 0.354 -0.242 0.222 MuHd_075 : 8.652 7.861 3.371 2.160 MuHd_095 : 15.312 8.735 4.844 2.308 MuHd_100 : 16.782 11.055 5.465 3.318 MuHd_105 : 26.291 17.710 7.712 5.381 Hmax_075 : 9.217 11.317 0.287 3.827 Hmax_095 : 9.200 10.900 0.824 3.620 Hmax_100 : 8.000 11.700 0.468 3.930 Hmax_105 : 7.087 9.537 -0.014 3.281 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9793 0.0207 DFMC : 0.9838 0.0162
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 285 PVX_239290 MAQDIKIMNLTKSSLEALNRNQMLSKKSSRKILKICMYAILTFAMCGVVLICLTAMSNSDGSLTQSGSHNQSGSLKGLSS 80 TPGDGEILNKAEIETLRFIFSNYPHGNRDPTGDDVEKPADAALPNEEDQKVKIADAGKHIKLMKQYNEIVADMSEDNKEQ 160 LAKMLRELLKKKINERKKKREDPNGNNEEGKEVINISVPSFNYKRVSANQDDSDDEEEVSVAQIEGLFVNLKYASKFFNF 240 MNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQF 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_239290 6 -MAQDIK|IM 0.055 . PVX_239290 12 KIMNLTK|SS 0.079 . PVX_239290 20 SLEALNR|NQ 0.080 . PVX_239290 26 RNQMLSK|KS 0.071 . PVX_239290 27 NQMLSKK|SS 0.198 . PVX_239290 30 LSKKSSR|KI 0.106 . PVX_239290 31 SKKSSRK|IL 0.094 . PVX_239290 34 SSRKILK|IC 0.077 . PVX_239290 76 NQSGSLK|GL 0.084 . PVX_239290 90 DGEILNK|AE 0.061 . PVX_239290 97 AEIETLR|FI 0.101 . PVX_239290 108 NYPHGNR|DP 0.071 . PVX_239290 117 TGDDVEK|PA 0.091 . PVX_239290 130 PNEEDQK|VK 0.056 . PVX_239290 132 EEDQKVK|IA 0.085 . PVX_239290 138 KIADAGK|HI 0.062 . PVX_239290 141 DAGKHIK|LM 0.064 . PVX_239290 144 KHIKLMK|QY 0.078 . PVX_239290 158 DMSEDNK|EQ 0.059 . PVX_239290 163 NKEQLAK|ML 0.074 . PVX_239290 166 QLAKMLR|EL 0.081 . PVX_239290 170 MLRELLK|KK 0.064 . PVX_239290 171 LRELLKK|KI 0.089 . PVX_239290 172 RELLKKK|IN 0.097 . PVX_239290 176 KKKINER|KK 0.082 . PVX_239290 177 KKINERK|KK 0.085 . PVX_239290 178 KINERKK|KR 0.101 . PVX_239290 179 INERKKK|RE 0.425 . PVX_239290 180 NERKKKR|ED 0.214 . PVX_239290 191 GNNEEGK|EV 0.086 . PVX_239290 204 VPSFNYK|RV 0.121 . PVX_239290 205 PSFNYKR|VS 0.132 . PVX_239290 232 GLFVNLK|YA 0.088 . PVX_239290 236 NLKYASK|FF 0.061 . PVX_239290 243 FFNFMNK|YK 0.066 . PVX_239290 245 NFMNKYK|RS 0.067 . PVX_239290 246 FMNKYKR|SY 0.419 . PVX_239290 249 KYKRSYK|DI 0.239 . PVX_239290 257 INEQMEK|YK 0.063 . PVX_239290 259 EQMEKYK|NF 0.066 . PVX_239290 262 EKYKNFK|MN 0.066 . PVX_239290 267 FKMNYLK|IK 0.066 . PVX_239290 269 MNYLKIK|KH 0.071 . PVX_239290 270 NYLKIKK|HN 0.096 . PVX_239290 279 ETNQMYK|MK 0.067 . PVX_239290 281 NQMYKMK|VN 0.071 . ____________________________^_________________

  • Fasta :-

    >PVX_239290 TAGTTAAGCTTGGTACCGAGCTCGGATCCAGTACCCTTCACCATGGCGCAGGATATCAAA ATCATGAACCTGACCAAGTCCAGCCTGGAGGCCCTGAACAGAAACCAAATGCTCTCCAAA AAGAGCAGTAGGAAAATTCTGAAGATATGCATGTACGCAATTCTGACATTTGCAATGTGC GGTGTGGTGTTGATATGCCTCACTGCCATGTCGAACAGTGATGGGAGCCTTACCCAGAGT GGCAGCCATAACCAGAGCGGCAGCCTGAAGGGTCTCTCTTCCACCCCTGGTGATGGAGAA ATCCTCAACAAGGCTGAAATAGAAACGCTGAGATTTATCTTTTCAAATTACCCCCACGGG AATAGAGATCCAACTGGTGATGATGTGGAAAAACCAGCAGATGCCGCCTTACCAAATGAA GAGGATCAAAAGGTAAAAATTGCAGACGCGGGAAAGCACATCAAATTGATGAAGCAGTAC AACGAAATTGTGGCGGACATGAGTGAGGACAACAAAGAACAGCTAGCCAAAATGTTGAGG GAACTTTTGAAAAAAAAAATAAATGAAAGGAAGAAGAAGAGAGAAGACCCAAATGGTAAT AATGAAGAAGGGAAAGAAGTTATCAATATAAGTGTGCCAAGTTTTAATTACAAACGAGTC AGCGCCAACCAAGATGATAGTGACGACGAGGAAGAGGTGAGTGTGGCGCAGATAGAAGGC CTATTCGTCAACCTGAAATATGCCTCGAAATTTTTCAACTTCATGAACAAGTATAAAAGA AGCTATAAAGACATCAACGAGCAGATGGAGAAATATAAAAACTTCAAAATGAATTATCTC AAAATTAAGAAGCATAATGAAACGAATCAAATGTACAAAATGAAGGTAAACCAGTTT
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  • Fasta :-

    MAQDIKIMNLTKSSLEALNRNQMLSKKSSRKILKICMYAILTFAMCGVVLICLTAMSNSD GSLTQSGSHNQSGSLKGLSSTPGDGEILNKAEIETLRFIFSNYPHGNRDPTGDDVEKPAD AALPNEEDQKVKIADAGKHIKLMKQYNEIVADMSEDNKEQLAKMLRELLKKKINERKKKR EDPNGNNEEGKEVINISVPSFNYKRVSANQDDSDDEEEVSVAQIEGLFVNLKYASKFFNF MNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PVX_23929025 SNQMLSKKSS0.995unspPVX_239290213 SNQDDSDDEE0.994unsp
PVX_239290      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India