PVX_240290 | unspecified product

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PVX_240290OTHER0.9975760.0022560.000168
No Results

  • Fasta :-

    >PVX_240290 MNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYA KEHNKTILTLSEQEVVDCSKLNFGCDGGHPFYSFIYAIENGICMGDDYKYKAMDNLFCLN YRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFYGGGIFNGTCTEELNHSV LLVGYGQVQSSKIFQEKNAYDDASGVTKKGALSYPSKADDGIQYYWIIKNSWSKFWGENG FMRISRNKEGDNVFCGIGVEVFYPILKGQDNSADIQHSGGRSSLEGPRFEGKPIPNPLLG LDSTRTGHHHHHH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PVX_240290.fa Sequence name : PVX_240290 Sequence length : 313 VALUES OF COMPUTED PARAMETERS Coef20 : 3.715 CoefTot : -0.650 ChDiff : -7 ZoneTo : 20 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.965 1.112 0.199 0.546 MesoH : -0.636 0.188 -0.359 0.200 MuHd_075 : 21.245 20.069 7.930 5.520 MuHd_095 : 4.470 3.310 1.337 0.972 MuHd_100 : 5.752 6.830 2.166 1.524 MuHd_105 : 10.083 10.523 3.605 2.766 Hmax_075 : 5.600 10.900 -0.099 3.200 Hmax_095 : 3.400 2.800 -0.980 1.670 Hmax_100 : 5.200 7.300 0.029 2.960 Hmax_105 : 10.800 9.600 1.800 3.560 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8389 0.1611 DFMC : 0.8499 0.1501
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 313 PVX_240290 MNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDCSK 80 LNFGCDGGHPFYSFIYAIENGICMGDDYKYKAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDF 160 SFYGGGIFNGTCTEELNHSVLLVGYGQVQSSKIFQEKNAYDDASGVTKKGALSYPSKADDGIQYYWIIKNSWSKFWGENG 240 FMRISRNKEGDNVFCGIGVEVFYPILKGQDNSADIQHSGGRSSLEGPRFEGKPIPNPLLGLDSTRTGHHHHHH 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PVX_240290 5 --MNNGK|GK 0.068 . PVX_240290 7 MNNGKGK|NV 0.098 . PVX_240290 29 PEILDYR|EK 0.081 . PVX_240290 31 ILDYREK|GI 0.068 . PVX_240290 38 GIVHEPK|DQ 0.093 . PVX_240290 61 VECMYAK|EH 0.062 . PVX_240290 65 YAKEHNK|TI 0.062 . PVX_240290 80 EVVDCSK|LN 0.061 . PVX_240290 109 CMGDDYK|YK 0.057 . PVX_240290 111 GDDYKYK|AM 0.066 . PVX_240290 122 LFCLNYR|CK 0.086 . PVX_240290 124 CLNYRCK|NK 0.061 . PVX_240290 126 NYRCKNK|VT 0.065 . PVX_240290 136 SSVGGVK|EN 0.063 . PVX_240290 142 KENELIR|AL 0.115 . PVX_240290 192 GQVQSSK|IF 0.061 . PVX_240290 197 SKIFQEK|NA 0.080 . PVX_240290 208 DASGVTK|KG 0.065 . PVX_240290 209 ASGVTKK|GA 0.121 . PVX_240290 217 ALSYPSK|AD 0.083 . PVX_240290 229 QYYWIIK|NS 0.060 . PVX_240290 234 IKNSWSK|FW 0.103 . PVX_240290 243 GENGFMR|IS 0.124 . PVX_240290 246 GFMRISR|NK 0.239 . PVX_240290 248 MRISRNK|EG 0.075 . PVX_240290 267 VFYPILK|GQ 0.059 . PVX_240290 281 IQHSGGR|SS 0.136 . PVX_240290 288 SSLEGPR|FE 0.098 . PVX_240290 292 GPRFEGK|PI 0.071 . PVX_240290 305 LGLDSTR|TG 0.087 . ____________________________^_________________

  • Fasta :-

    >PVX_240290 CCCGGATCACCTGAAGAAGAAATATGTAGTGCCGTTCAGTTCCATGAATAACGGAAAGGG CAAAAATGTAGTGACTAGCAGCAGCGGCGCTAACCTTCTTGCCGACGTGCCAGAAATTTT AGACTATAGAGAAAAAGGAATTGTGCATGAACCCAAGGACCAAGGGCTATGCGGCTCGTG CTGGGCCTTTGCCAGTGTAGGAAATGTTGAATGCATGTACGCCAAGGAGCATAACAAGAC CATTTTAACTTTGAGTGAGCAAGAAGTTGTAGATTGTTCTAAGCTAAATTTCGGATGTGA TGGAGGACACCCATTTTATTCTTTCATTTATGCCATCGAAAATGGAATTTGCATGGGGGA CGACTATAAATATAAAGCGATGGATAATTTATTTTGCCTAAACTATAGATGTAAGAATAA AGTTACTCTCTCCTCTGTTGGTGGGGTGAAAGAAAACGAATTGATACGTGCTCTAAATGA AGTAGGTCCTGTGTCCGTCAATGTCGGGGTAACGGACGATTTCTCCTTTTACGGCGGAGG AATATTCAATGGCACTTGCACAGAAGAATTAAACCACTCCGTTCTTCTTGTTGGCTATGG CCAAGTGCAGAGCAGCAAAATATTTCAAGAAAAGAACGCTTATGATGATGCCTCTGGAGT TACGAAGAAGGGAGCGCTATCATACCCATCAAAGGCCGATGATGGTATTCAGTACTATTG GATTATTAAAAATTCGTGGAGCAAATTTTGGGGAGAAAACGGATTTATGAGAATTAGTCG AAATAAGGAGGGAGATAACGTGTTTTGCGGAATCGGTGTCGAAGTTTTCTACCCCATTTT GAAGGGTCAAGACAATTCTGCAGATATCCAGCACAGTGGCGGCCGCTCGAGTCTAGAGGG CCCGCGGTTCGAAGGTAAGCCTATCCCTAACCCTCTCCTCGGTCTCGATTCTACGCGTAC CGGTCATCATCACCATCACCATTGA
  • Download Fasta

  • Fasta :-

    MNNGKGKNVVTSSSGANLLADVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYA KEHNKTILTLSEQEVVDCSKLNFGCDGGHPFYSFIYAIENGICMGDDYKYKAMDNLFCLN YRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFYGGGIFNGTCTEELNHSV LLVGYGQVQSSKIFQEKNAYDDASGVTKKGALSYPSKADDGIQYYWIIKNSWSKFWGENG FMRISRNKEGDNVFCGIGVEVFYPILKGQDNSADIQHSGGRSSLEGPRFEGKPIPNPLLG LDSTRTGHHHHHH

  • title: active site
  • coordinates: Q40,C46,H178,N230
No Results
No Results
IDSitePeptideScoreMethod
PVX_240290283 SGGRSSLEGP0.996unsp
PVX_240290      


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India