PY17X_0108700 | proteasome subunit alpha type-2, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0108700OTHER0.9990720.0000890.000839
No Results

  • Fasta :-

    >PY17X_0108700 MADGEYNFSLTTFSPTGKLVQIEYALNRVSSSSPALGIRAKNGVIIATEKKTPNELIEET SIYKIQQISDHIGIVYAGMPGDFRVLLKKARKEAIKYSLQYGNEILVKELVKEIASIVQE FTQTGGVRPFGLSLLICGVDAYGYHLYQIDPSGCYFNWMATCIGKDYQNNISFLEKRYNS DIEVEDAIHTAILTLKESYEGVMNEKNIEIGVVCNNNTFKILTPNEIKDYLIEIE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0108700.fa Sequence name : PY17X_0108700 Sequence length : 235 VALUES OF COMPUTED PARAMETERS Coef20 : 3.599 CoefTot : 0.141 ChDiff : -7 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.835 1.159 0.114 0.558 MesoH : -0.431 0.321 -0.308 0.257 MuHd_075 : 10.170 2.388 2.502 0.954 MuHd_095 : 21.755 11.137 5.237 3.846 MuHd_100 : 16.939 9.131 4.463 3.049 MuHd_105 : 5.321 4.503 2.717 1.471 Hmax_075 : 3.588 -0.350 -1.802 1.770 Hmax_095 : 11.500 3.762 0.023 2.958 Hmax_100 : 10.200 5.200 0.889 3.430 Hmax_105 : 8.867 2.100 0.027 2.438 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9410 0.0590 DFMC : 0.9497 0.0503
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 235 PY17X_0108700 MADGEYNFSLTTFSPTGKLVQIEYALNRVSSSSPALGIRAKNGVIIATEKKTPNELIEETSIYKIQQISDHIGIVYAGMP 80 GDFRVLLKKARKEAIKYSLQYGNEILVKELVKEIASIVQEFTQTGGVRPFGLSLLICGVDAYGYHLYQIDPSGCYFNWMA 160 TCIGKDYQNNISFLEKRYNSDIEVEDAIHTAILTLKESYEGVMNEKNIEIGVVCNNNTFKILTPNEIKDYLIEIE 240 ................................................................................ 80 ................................................................................ 160 ........................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0108700 18 TFSPTGK|LV 0.080 . PY17X_0108700 28 IEYALNR|VS 0.082 . PY17X_0108700 39 SPALGIR|AK 0.114 . PY17X_0108700 41 ALGIRAK|NG 0.062 . PY17X_0108700 50 VIIATEK|KT 0.061 . PY17X_0108700 51 IIATEKK|TP 0.081 . PY17X_0108700 64 EETSIYK|IQ 0.056 . PY17X_0108700 84 GMPGDFR|VL 0.070 . PY17X_0108700 88 DFRVLLK|KA 0.066 . PY17X_0108700 89 FRVLLKK|AR 0.108 . PY17X_0108700 91 VLLKKAR|KE 0.080 . PY17X_0108700 92 LLKKARK|EA 0.093 . PY17X_0108700 96 ARKEAIK|YS 0.077 . PY17X_0108700 108 GNEILVK|EL 0.068 . PY17X_0108700 112 LVKELVK|EI 0.064 . PY17X_0108700 128 TQTGGVR|PF 0.098 . PY17X_0108700 165 MATCIGK|DY 0.067 . PY17X_0108700 176 NISFLEK|RY 0.066 . PY17X_0108700 177 ISFLEKR|YN 0.322 . PY17X_0108700 196 TAILTLK|ES 0.071 . PY17X_0108700 206 EGVMNEK|NI 0.069 . PY17X_0108700 220 CNNNTFK|IL 0.076 . PY17X_0108700 228 LTPNEIK|DY 0.062 . ____________________________^_________________

  • Fasta :-

    >PY17X_0108700 ATGGCTGATGGAGAATATAACTTTTCATTAACAACATTTAGCCCAACTGGAAAATTAGTA CAAATCGAATATGCTTTAAATAGAGTATCTAGTAGTTCTCCAGCCTTAGGAATCCGGGCC AAAAACGGAGTCATAATTGCCACGGAAAAAAAGACCCCAAATGAATTGATCGAAGAAACA AGTATTTACAAAATTCAACAAATCAGTGATCATATTGGTATAGTATATGCTGGTATGCCT GGTGATTTTCGAGTTTTATTAAAAAAAGCAAGAAAAGAAGCTATAAAATATTCTTTACAA TATGGAAATGAAATATTAGTAAAAGAACTAGTAAAAGAAATCGCATCAATTGTTCAAGAA TTTACACAAACAGGAGGTGTCAGACCATTTGGTTTGTCTTTATTAATTTGTGGCGTTGAT GCATATGGTTATCATTTATATCAAATTGATCCATCAGGATGTTATTTTAATTGGATGGCA ACATGTATAGGTAAAGATTATCAAAATAATATTTCTTTTTTAGAAAAAAGATATAATAGT GATATAGAAGTTGAGGATGCTATACATACAGCCATATTAACCTTAAAGGAAAGTTATGAA GGTGTTATGAATGAAAAGAATATCGAAATAGGGGTTGTTTGTAATAACAATACATTTAAA ATATTAACCCCAAATGAAATTAAAGATTATTTAATAGAAATAGAATAA
  • Download Fasta

  • Fasta :-

    MADGEYNFSLTTFSPTGKLVQIEYALNRVSSSSPALGIRAKNGVIIATEKKTPNELIEET SIYKIQQISDHIGIVYAGMPGDFRVLLKKARKEAIKYSLQYGNEILVKELVKEIASIVQE FTQTGGVRPFGLSLLICGVDAYGYHLYQIDPSGCYFNWMATCIGKDYQNNISFLEKRYNS DIEVEDAIHTAILTLKESYEGVMNEKNIEIGVVCNNNTFKILTPNEIKDYLIEIE

  • title: active site
  • coordinates: S33,E49,K51,K64,K165
No Results
No Results
IDSitePeptideScoreMethod
PY17X_0108700180 SKRYNSDIEV0.995unsp
PY17X_0108700


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India