PY17X_0412200 | plasmepsin VI, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PY17X_0412200OTHER0.5334540.4303310.036215
No Results

  • Fasta :-

    >PY17X_0412200 MPNFRIKSYLFLYLSFLLFFEIITIFHVSSIRISTVLKNDNKKKNFNTPLVEENKKYLFN EIKLNNRFKNDIKGYIQNINNFHSIIESKIPNSLLYVHEDLINFHNSQFIGDIEIGNPPQ SFKVVFDTGSSNFAIPSTKCVKGGCTLHNKFDIKKSRTFMSSLKNKKESIYTYIQYGTGK SILEHGYDDVYMKGLKISKQCIGLIIEESMHPFSDLPFDGIVGLGFSDPDNSFQTKYSKS LIETIKEQNLLQQNIFSFYVPKELEKSGAITFGRANSKYAIEGEKIEWFPVISMYFWEIN LLGILLPDKNFEICSNKKCRAAIDTGSSLLTGPSSLMQPLIENINLEKDCSNISSLPIIS FVLKNVEGKTVILDFTPDDYILQENSEEDNSSQCVIGLMSLDIPPPRGPIFIFGNVFIRK YYTIFDNDHKLVGVVKSNHNF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0412200.fa Sequence name : PY17X_0412200 Sequence length : 441 VALUES OF COMPUTED PARAMETERS Coef20 : 4.529 CoefTot : 0.029 ChDiff : 0 ZoneTo : 39 KR : 4 DE : 1 CleavSite : 34 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.041 2.365 0.302 0.882 MesoH : -0.550 0.346 -0.348 0.235 MuHd_075 : 18.471 13.327 4.928 3.440 MuHd_095 : 23.782 16.936 6.775 4.943 MuHd_100 : 24.262 18.151 7.122 5.741 MuHd_105 : 25.490 16.774 7.491 5.232 Hmax_075 : 16.000 16.917 3.306 5.682 Hmax_095 : 18.113 23.500 4.565 6.422 Hmax_100 : 19.000 23.500 4.565 7.420 Hmax_105 : 18.900 22.983 4.599 7.373 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9105 0.0895 DFMC : 0.9130 0.0870
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 441 PY17X_0412200 MPNFRIKSYLFLYLSFLLFFEIITIFHVSSIRISTVLKNDNKKKNFNTPLVEENKKYLFNEIKLNNRFKNDIKGYIQNIN 80 NFHSIIESKIPNSLLYVHEDLINFHNSQFIGDIEIGNPPQSFKVVFDTGSSNFAIPSTKCVKGGCTLHNKFDIKKSRTFM 160 SSLKNKKESIYTYIQYGTGKSILEHGYDDVYMKGLKISKQCIGLIIEESMHPFSDLPFDGIVGLGFSDPDNSFQTKYSKS 240 LIETIKEQNLLQQNIFSFYVPKELEKSGAITFGRANSKYAIEGEKIEWFPVISMYFWEINLLGILLPDKNFEICSNKKCR 320 AAIDTGSSLLTGPSSLMQPLIENINLEKDCSNISSLPIISFVLKNVEGKTVILDFTPDDYILQENSEEDNSSQCVIGLMS 400 LDIPPPRGPIFIFGNVFIRKYYTIFDNDHKLVGVVKSNHNF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0412200 5 --MPNFR|IK 0.083 . PY17X_0412200 7 MPNFRIK|SY 0.085 . PY17X_0412200 32 FHVSSIR|IS 0.073 . PY17X_0412200 38 RISTVLK|ND 0.065 . PY17X_0412200 42 VLKNDNK|KK 0.056 . PY17X_0412200 43 LKNDNKK|KN 0.096 . PY17X_0412200 44 KNDNKKK|NF 0.120 . PY17X_0412200 55 PLVEENK|KY 0.055 . PY17X_0412200 56 LVEENKK|YL 0.100 . PY17X_0412200 63 YLFNEIK|LN 0.062 . PY17X_0412200 67 EIKLNNR|FK 0.086 . PY17X_0412200 69 KLNNRFK|ND 0.083 . PY17X_0412200 73 RFKNDIK|GY 0.072 . PY17X_0412200 89 HSIIESK|IP 0.062 . PY17X_0412200 123 NPPQSFK|VV 0.088 . PY17X_0412200 139 FAIPSTK|CV 0.080 . PY17X_0412200 142 PSTKCVK|GG 0.061 . PY17X_0412200 150 GCTLHNK|FD 0.068 . PY17X_0412200 154 HNKFDIK|KS 0.066 . PY17X_0412200 155 NKFDIKK|SR 0.097 . PY17X_0412200 157 FDIKKSR|TF 0.110 . PY17X_0412200 164 TFMSSLK|NK 0.062 . PY17X_0412200 166 MSSLKNK|KE 0.081 . PY17X_0412200 167 SSLKNKK|ES 0.084 . PY17X_0412200 180 IQYGTGK|SI 0.086 . PY17X_0412200 193 YDDVYMK|GL 0.067 . PY17X_0412200 196 VYMKGLK|IS 0.057 . PY17X_0412200 199 KGLKISK|QC 0.057 . PY17X_0412200 236 DNSFQTK|YS 0.081 . PY17X_0412200 239 FQTKYSK|SL 0.074 . PY17X_0412200 246 SLIETIK|EQ 0.061 . PY17X_0412200 262 FSFYVPK|EL 0.083 . PY17X_0412200 266 VPKELEK|SG 0.067 . PY17X_0412200 274 GAITFGR|AN 0.113 . PY17X_0412200 278 FGRANSK|YA 0.092 . PY17X_0412200 285 YAIEGEK|IE 0.053 . PY17X_0412200 309 GILLPDK|NF 0.056 . PY17X_0412200 317 FEICSNK|KC 0.069 . PY17X_0412200 318 EICSNKK|CR 0.086 . PY17X_0412200 320 CSNKKCR|AA 0.226 . PY17X_0412200 348 ENINLEK|DC 0.066 . PY17X_0412200 364 IISFVLK|NV 0.101 . PY17X_0412200 369 LKNVEGK|TV 0.076 . PY17X_0412200 407 LDIPPPR|GP 0.096 . PY17X_0412200 419 FGNVFIR|KY 0.102 . PY17X_0412200 420 GNVFIRK|YY 0.095 . PY17X_0412200 430 IFDNDHK|LV 0.075 . PY17X_0412200 436 KLVGVVK|SN 0.083 . ____________________________^_________________

  • Fasta :-

    >PY17X_0412200 ATGCCAAATTTTCGCATTAAGTCTTATCTGTTTTTATATTTATCCTTTTTATTATTTTTT GAGATAATCACAATATTCCATGTTTCATCGATAAGAATATCCACTGTTTTAAAAAATGAC AATAAAAAAAAAAATTTTAACACTCCATTGGTGGAAGAAAATAAAAAATACCTTTTCAAT GAAATAAAATTAAATAATAGATTTAAAAATGATATAAAAGGATATATTCAAAATATCAAC AATTTCCATTCAATAATAGAAAGTAAAATACCAAATTCGTTATTATATGTTCACGAAGAC TTAATTAATTTTCACAATAGTCAATTTATTGGTGATATCGAAATTGGTAATCCTCCTCAA AGTTTTAAGGTTGTCTTTGATACGGGATCCAGTAACTTTGCAATTCCCTCAACAAAATGT GTTAAAGGAGGATGTACTTTACACAATAAATTCGATATCAAGAAATCACGGACTTTTATG AGCAGCTTGAAAAATAAAAAGGAGTCCATCTATACATATATTCAATACGGAACAGGAAAA AGCATTCTCGAGCATGGATATGATGATGTGTACATGAAGGGATTAAAAATTAGTAAACAA TGTATAGGGTTAATAATCGAAGAATCTATGCACCCCTTCTCGGACTTACCGTTTGACGGA ATTGTTGGATTAGGATTTTCTGATCCGGATAATAGTTTCCAAACTAAATATTCTAAGTCC TTAATCGAAACAATTAAAGAGCAGAATCTTCTACAACAAAATATATTTTCATTTTATGTG CCAAAGGAGTTGGAAAAATCAGGGGCAATTACATTTGGAAGGGCTAATAGCAAATATGCG ATAGAAGGAGAAAAAATCGAATGGTTTCCCGTTATTTCAATGTACTTTTGGGAAATAAAT TTATTAGGGATATTGCTTCCAGACAAAAATTTCGAAATATGTTCAAATAAAAAATGCAGA GCAGCAATTGATACCGGTTCCAGTTTGCTAACTGGGCCATCAAGCCTTATGCAGCCATTA ATAGAAAACATAAATTTAGAAAAGGATTGTTCTAATATAAGTAGTTTACCAATTATTTCA TTTGTTTTAAAAAATGTCGAAGGGAAAACAGTCATACTAGATTTTACCCCAGATGATTAT ATTTTGCAAGAAAATAGTGAAGAGGATAATTCTTCTCAGTGTGTAATTGGACTGATGTCC CTTGACATTCCACCACCCCGAGGCCCTATTTTCATTTTTGGCAATGTTTTCATTAGAAAA TATTACACAATATTTGACAATGACCATAAGCTTGTTGGAGTAGTTAAAAGCAATCACAAT TTTTAA
  • Download Fasta

  • Fasta :-

    MPNFRIKSYLFLYLSFLLFFEIITIFHVSSIRISTVLKNDNKKKNFNTPLVEENKKYLFN EIKLNNRFKNDIKGYIQNINNFHSIIESKIPNSLLYVHEDLINFHNSQFIGDIEIGNPPQ SFKVVFDTGSSNFAIPSTKCVKGGCTLHNKFDIKKSRTFMSSLKNKKESIYTYIQYGTGK SILEHGYDDVYMKGLKISKQCIGLIIEESMHPFSDLPFDGIVGLGFSDPDNSFQTKYSKS LIETIKEQNLLQQNIFSFYVPKELEKSGAITFGRANSKYAIEGEKIEWFPVISMYFWEIN LLGILLPDKNFEICSNKKCRAAIDTGSSLLTGPSSLMQPLIENINLEKDCSNISSLPIIS FVLKNVEGKTVILDFTPDDYILQENSEEDNSSQCVIGLMSLDIPPPRGPIFIFGNVFIRK YYTIFDNDHKLVGVVKSNHNF

  • title: inhibitor binding site
  • coordinates: D127,G129,S131,Y173,I174,Q175,I221
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0412200240 SKYSKSLIET0.991unspPY17X_0412200386 SLQENSEEDN0.996unsp
PY17X_0412200


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India