PY17X_0619000 | conserved Plasmodium protein, unknown function

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_IDPredictionOTHERSPmTPCS_Position
PY17X_0619000OTHER0.9305460.0006100.068844
No Results

  • Fasta :-

    >PY17X_0619000 MINHFKKNILLENYISTNCLKQKCVNGSLLFCSYSSKNNCNLYGVGGKTALLNFHRIRNS VGSIKKIGIHSYNKNNNGIKSSNNKERVNLFSEKDKKENPNKNEQGIIMYYPENSRFPYV TICVVLGMIGISSFFKTLIYNLKNCDNENDLISQVDKILNYLDNYFIIYNFEENKKNTEY KNDIFNIKYLTSQFFLNENILQCAVQMFTFFLASCFLEKHYGSLIYIGLFLSGTLFSNIV TTLFCDLIKSAESLKFINFVLIHPSGSMSFICAFCSIFFKNCSIWKNIPINCSVLIVPFL FSSFYGLLSLYKINKHNLEEVNKINNTNTYENNSSIERTKFDLENNIIKNIDNNDEKKSI QYVKEDTHKHRNDNFIPYKQNEALNILQNFLIAEKCDSIIKKQKTEHVFLNKKIQNLKKE ALRNIDEINNKSEKIFFSLSSAFTDVFGIVLASTLYLLKILK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0619000.fa Sequence name : PY17X_0619000 Sequence length : 462 VALUES OF COMPUTED PARAMETERS Coef20 : 3.836 CoefTot : -4.363 ChDiff : 15 ZoneTo : 85 KR : 13 DE : 1 CleavSite : 60 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.141 2.088 0.477 0.766 MesoH : 0.902 1.173 0.036 0.475 MuHd_075 : 43.318 37.189 16.989 9.830 MuHd_095 : 39.084 23.990 12.827 8.374 MuHd_100 : 31.509 24.895 11.329 7.227 MuHd_105 : 33.543 27.935 10.940 8.650 Hmax_075 : 18.083 25.100 7.527 6.592 Hmax_095 : 10.800 10.200 2.449 4.580 Hmax_100 : 14.100 15.700 3.556 5.420 Hmax_105 : 16.800 17.100 -0.456 4.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0387 0.9613 DFMC : 0.0287 0.9713 This protein is probably imported in chloroplast. f(Ser) = 0.1176 f(Arg) = 0.0235 CMi = 1.14286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 462 PY17X_0619000 MINHFKKNILLENYISTNCLKQKCVNGSLLFCSYSSKNNCNLYGVGGKTALLNFHRIRNSVGSIKKIGIHSYNKNNNGIK 80 SSNNKERVNLFSEKDKKENPNKNEQGIIMYYPENSRFPYVTICVVLGMIGISSFFKTLIYNLKNCDNENDLISQVDKILN 160 YLDNYFIIYNFEENKKNTEYKNDIFNIKYLTSQFFLNENILQCAVQMFTFFLASCFLEKHYGSLIYIGLFLSGTLFSNIV 240 TTLFCDLIKSAESLKFINFVLIHPSGSMSFICAFCSIFFKNCSIWKNIPINCSVLIVPFLFSSFYGLLSLYKINKHNLEE 320 VNKINNTNTYENNSSIERTKFDLENNIIKNIDNNDEKKSIQYVKEDTHKHRNDNFIPYKQNEALNILQNFLIAEKCDSII 400 KKQKTEHVFLNKKIQNLKKEALRNIDEINNKSEKIFFSLSSAFTDVFGIVLASTLYLLKILK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .............................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0619000 6 -MINHFK|KN 0.062 . PY17X_0619000 7 MINHFKK|NI 0.108 . PY17X_0619000 21 ISTNCLK|QK 0.062 . PY17X_0619000 23 TNCLKQK|CV 0.103 . PY17X_0619000 37 FCSYSSK|NN 0.065 . PY17X_0619000 48 LYGVGGK|TA 0.060 . PY17X_0619000 56 ALLNFHR|IR 0.080 . PY17X_0619000 58 LNFHRIR|NS 0.092 . PY17X_0619000 65 NSVGSIK|KI 0.070 . PY17X_0619000 66 SVGSIKK|IG 0.080 . PY17X_0619000 74 GIHSYNK|NN 0.061 . PY17X_0619000 80 KNNNGIK|SS 0.098 . PY17X_0619000 85 IKSSNNK|ER 0.061 . PY17X_0619000 87 SSNNKER|VN 0.141 . PY17X_0619000 94 VNLFSEK|DK 0.065 . PY17X_0619000 96 LFSEKDK|KE 0.069 . PY17X_0619000 97 FSEKDKK|EN 0.090 . PY17X_0619000 102 KKENPNK|NE 0.069 . PY17X_0619000 116 YYPENSR|FP 0.068 . PY17X_0619000 136 GISSFFK|TL 0.077 . PY17X_0619000 143 TLIYNLK|NC 0.065 . PY17X_0619000 157 LISQVDK|IL 0.072 . PY17X_0619000 175 YNFEENK|KN 0.060 . PY17X_0619000 176 NFEENKK|NT 0.095 . PY17X_0619000 181 KKNTEYK|ND 0.074 . PY17X_0619000 188 NDIFNIK|YL 0.069 . PY17X_0619000 219 ASCFLEK|HY 0.069 . PY17X_0619000 249 LFCDLIK|SA 0.080 . PY17X_0619000 255 KSAESLK|FI 0.079 . PY17X_0619000 280 FCSIFFK|NC 0.068 . PY17X_0619000 286 KNCSIWK|NI 0.061 . PY17X_0619000 312 GLLSLYK|IN 0.060 . PY17X_0619000 315 SLYKINK|HN 0.064 . PY17X_0619000 323 NLEEVNK|IN 0.061 . PY17X_0619000 338 NNSSIER|TK 0.100 . PY17X_0619000 340 SSIERTK|FD 0.063 . PY17X_0619000 349 LENNIIK|NI 0.067 . PY17X_0619000 357 IDNNDEK|KS 0.065 . PY17X_0619000 358 DNNDEKK|SI 0.178 . PY17X_0619000 364 KSIQYVK|ED 0.065 . PY17X_0619000 369 VKEDTHK|HR 0.062 . PY17X_0619000 371 EDTHKHR|ND 0.086 . PY17X_0619000 379 DNFIPYK|QN 0.067 . PY17X_0619000 395 NFLIAEK|CD 0.058 . PY17X_0619000 401 KCDSIIK|KQ 0.053 . PY17X_0619000 402 CDSIIKK|QK 0.132 . PY17X_0619000 404 SIIKKQK|TE 0.068 . PY17X_0619000 412 EHVFLNK|KI 0.060 . PY17X_0619000 413 HVFLNKK|IQ 0.071 . PY17X_0619000 418 KKIQNLK|KE 0.053 . PY17X_0619000 419 KIQNLKK|EA 0.121 . PY17X_0619000 423 LKKEALR|NI 0.102 . PY17X_0619000 431 IDEINNK|SE 0.066 . PY17X_0619000 434 INNKSEK|IF 0.066 . PY17X_0619000 459 STLYLLK|IL 0.056 . PY17X_0619000 462 YLLKILK|-- 0.058 . ____________________________^_________________

  • Fasta :-

    >PY17X_0619000 ATGATAAATCATTTCAAAAAAAATATATTGTTGGAAAATTATATATCTACAAATTGTTTA AAGCAAAAATGCGTTAATGGAAGTTTACTTTTTTGTTCATATAGTTCAAAAAATAATTGT AATTTATATGGAGTTGGGGGAAAAACAGCATTATTAAATTTCCATAGGATACGGAATTCT GTGGGTAGTATCAAGAAAATTGGAATACACAGTTATAATAAAAATAATAATGGAATTAAG AGCAGTAATAATAAAGAGCGTGTAAATTTATTTAGTGAAAAAGACAAAAAAGAAAACCCT AATAAAAATGAACAAGGCATTATTATGTATTATCCAGAAAACTCAAGATTTCCATATGTA ACGATTTGTGTGGTTTTAGGAATGATCGGAATTTCATCTTTCTTTAAAACTTTAATTTAT AACTTAAAGAATTGTGATAATGAAAACGATTTAATATCGCAAGTAGATAAAATATTAAAC TATTTAGATAACTACTTTATTATATATAATTTTGAAGAAAATAAAAAAAATACAGAATAT AAAAATGACATATTTAATATAAAATATTTAACATCACAATTTTTTTTAAATGAAAATATA CTTCAATGTGCAGTTCAAATGTTTACATTTTTTCTAGCTTCCTGTTTCCTTGAAAAGCAT TATGGATCATTAATATATATTGGATTATTTTTAAGTGGCACCTTGTTTTCTAACATTGTC ACCACTTTATTTTGTGATCTTATTAAGAGTGCAGAATCATTAAAGTTTATTAACTTTGTT CTTATACACCCATCTGGATCGATGTCCTTTATATGTGCATTTTGTTCCATTTTTTTCAAA AATTGTTCTATATGGAAAAATATACCAATTAACTGTTCTGTATTAATCGTACCATTTTTA TTCTCAAGCTTTTATGGGCTCTTATCATTGTATAAAATCAATAAACACAATTTAGAAGAA GTAAATAAGATAAATAACACAAACACATATGAAAATAATAGTTCGATTGAAAGAACAAAA TTTGATTTAGAAAATAATATTATTAAAAACATTGATAACAATGATGAAAAAAAAAGTATA CAATATGTAAAGGAAGATACACATAAGCATAGAAATGATAATTTCATTCCTTATAAACAA AACGAAGCTCTAAATATATTACAAAATTTCTTAATAGCTGAGAAATGTGATTCAATAATA AAGAAACAGAAAACAGAACATGTTTTTTTAAATAAAAAAATCCAAAACTTAAAAAAAGAA GCACTAAGAAATATTGATGAAATAAATAATAAATCTGAAAAAATATTTTTTAGTCTCTCT TCTGCATTTACAGATGTATTTGGTATTGTCTTAGCATCAACACTTTATTTGCTCAAAATT TTGAAATGA
  • Download Fasta

  • Fasta :-

    MINHFKKNILLENYISTNCLKQKCVNGSLLFCSYSSKNNCNLYGVGGKTALLNFHRIRNS VGSIKKIGIHSYNKNNNGIKSSNNKERVNLFSEKDKKENPNKNEQGIIMYYPENSRFPYV TICVVLGMIGISSFFKTLIYNLKNCDNENDLISQVDKILNYLDNYFIIYNFEENKKNTEY KNDIFNIKYLTSQFFLNENILQCAVQMFTFFLASCFLEKHYGSLIYIGLFLSGTLFSNIV TTLFCDLIKSAESLKFINFVLIHPSGSMSFICAFCSIFFKNCSIWKNIPINCSVLIVPFL FSSFYGLLSLYKINKHNLEEVNKINNTNTYENNSSIERTKFDLENNIIKNIDNNDEKKSI QYVKEDTHKHRNDNFIPYKQNEALNILQNFLIAEKCDSIIKKQKTEHVFLNKKIQNLKKE ALRNIDEINNKSEKIFFSLSSAFTDVFGIVLASTLYLLKILK

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_061900092 SVNLFSEKDK0.997unspPY17X_0619000335 SENNSSIERT0.991unsp
PY17X_0619000


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India