Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0712400.fa
Sequence name : PY17X_0712400
Sequence length : 287
VALUES OF COMPUTED PARAMETERS
Coef20 : 5.001
CoefTot : 0.062
ChDiff : 5
ZoneTo : 29
KR : 2
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.124 2.912 0.504 0.929
MesoH : -0.006 0.639 -0.304 0.300
MuHd_075 : 21.186 18.148 6.635 5.828
MuHd_095 : 21.017 22.443 6.924 6.873
MuHd_100 : 13.590 12.858 4.726 4.089
MuHd_105 : 16.312 15.648 5.485 4.412
Hmax_075 : 17.588 27.100 4.503 8.820
Hmax_095 : 20.738 30.012 5.969 9.013
Hmax_100 : 18.900 25.500 5.011 7.920
Hmax_105 : 21.400 30.800 6.449 9.500
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.5388 0.4612
DFMC : 0.8772 0.1228
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
287 PY17X_0712400
MVLKKVIISIIIAIIASLVFINTYIYFAQDGLIFVKKDIDPIYNKPLGDNYEEIMITTEDGHKNKCWFIKTQDYENKPVI 80
LYFLGNGSYVEKNVEIFNLMVGRVDVSIFSCSHRGTGDNTLSPSEASFYSDAQTYLNYLKMKNMKNIFLFGTSMGCAVAI 160
ETALNNSNSVAGLIVQNPFLSMKKMAKLAKPFLFFIILSYDLLIRTKMDNEEKIKKNRVPVLFNISEKDKIVPPDHGKKL 240
YEICPSQKFIYTAKDGEHNNILVNDDGSYHRSMKIFIETVNSTYSKK 320
................................................................................ 80
................................................................................ 160
................................................................................ 240
............................................... 320
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_0712400 4 ---MVLK|KV 0.077 .
PY17X_0712400 5 --MVLKK|VI 0.107 .
PY17X_0712400 36 DGLIFVK|KD 0.058 .
PY17X_0712400 37 GLIFVKK|DI 0.236 .
PY17X_0712400 45 IDPIYNK|PL 0.067 .
PY17X_0712400 63 TTEDGHK|NK 0.060 .
PY17X_0712400 65 EDGHKNK|CW 0.078 .
PY17X_0712400 70 NKCWFIK|TQ 0.073 .
PY17X_0712400 77 TQDYENK|PV 0.082 .
PY17X_0712400 92 NGSYVEK|NV 0.095 .
PY17X_0712400 103 FNLMVGR|VD 0.078 .
PY17X_0712400 114 IFSCSHR|GT 0.188 .
PY17X_0712400 140 TYLNYLK|MK 0.057 .
PY17X_0712400 142 LNYLKMK|NM 0.070 .
PY17X_0712400 145 LKMKNMK|NI 0.075 .
PY17X_0712400 183 NPFLSMK|KM 0.060 .
PY17X_0712400 184 PFLSMKK|MA 0.083 .
PY17X_0712400 187 SMKKMAK|LA 0.076 .
PY17X_0712400 190 KMAKLAK|PF 0.063 .
PY17X_0712400 205 SYDLLIR|TK 0.080 .
PY17X_0712400 207 DLLIRTK|MD 0.057 .
PY17X_0712400 213 KMDNEEK|IK 0.057 .
PY17X_0712400 215 DNEEKIK|KN 0.059 .
PY17X_0712400 216 NEEKIKK|NR 0.089 .
PY17X_0712400 218 EKIKKNR|VP 0.072 .
PY17X_0712400 228 LFNISEK|DK 0.074 .
PY17X_0712400 230 NISEKDK|IV 0.078 .
PY17X_0712400 238 VPPDHGK|KL 0.067 .
PY17X_0712400 239 PPDHGKK|LY 0.103 .
PY17X_0712400 248 EICPSQK|FI 0.080 .
PY17X_0712400 254 KFIYTAK|DG 0.075 .
PY17X_0712400 271 DDGSYHR|SM 0.110 .
PY17X_0712400 274 SYHRSMK|IF 0.161 .
PY17X_0712400 286 VNSTYSK|K- 0.070 .
PY17X_0712400 287 NSTYSKK|-- 0.108 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation