PY17X_0721400 | conserved Plasmodium protein, unknown function

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_IDPredictionOTHERSPmTPCS_Position
PY17X_0721400OTHER0.9999720.0000100.000018
No Results

  • Fasta :-

    >PY17X_0721400 MNENTCRSIEQIFEGSTFNKSERKKLTFENEKLNLFFENGIINYSLIELVGSPGSGKTQF ALTLCAEQLIKINKEKKEDIVFYIYFNRTFPIQRLTTIIENKLKFNENNYTNYYIDEKKT NANKLPNANHIYSKKYNINQNEQENLFSFKTNKNDIVRNLLANLYIQKIHDENEFFSLFQ KNIHSILKYNKISLLVIDSFNSILNGNENLDSYKKYQLYIKMSLILKQISYENNIFIILI NSSNINKHYSDFSFNISDFIINSSCSNTVIIFKKTKKNNEQVRKMFIKCSEFLRMYKTLT FQITDSGVEAL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0721400.fa Sequence name : PY17X_0721400 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 3.724 CoefTot : -0.134 ChDiff : 9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.724 1.247 0.082 0.529 MesoH : -0.805 0.171 -0.484 0.181 MuHd_075 : 6.222 5.751 1.326 3.485 MuHd_095 : 41.886 20.592 10.194 6.579 MuHd_100 : 41.267 20.471 10.709 6.556 MuHd_105 : 37.841 20.268 10.596 6.731 Hmax_075 : -0.700 2.800 -2.610 2.602 Hmax_095 : 14.787 9.362 1.838 3.657 Hmax_100 : 13.000 9.300 1.985 3.630 Hmax_105 : 8.983 11.667 2.413 3.885 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5330 0.4670 DFMC : 0.8300 0.1700
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 PY17X_0721400 MNENTCRSIEQIFEGSTFNKSERKKLTFENEKLNLFFENGIINYSLIELVGSPGSGKTQFALTLCAEQLIKINKEKKEDI 80 VFYIYFNRTFPIQRLTTIIENKLKFNENNYTNYYIDEKKTNANKLPNANHIYSKKYNINQNEQENLFSFKTNKNDIVRNL 160 LANLYIQKIHDENEFFSLFQKNIHSILKYNKISLLVIDSFNSILNGNENLDSYKKYQLYIKMSLILKQISYENNIFIILI 240 NSSNINKHYSDFSFNISDFIINSSCSNTVIIFKKTKKNNEQVRKMFIKCSEFLRMYKTLTFQITDSGVEAL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0721400 7 MNENTCR|SI 0.250 . PY17X_0721400 20 EGSTFNK|SE 0.105 . PY17X_0721400 23 TFNKSER|KK 0.103 . PY17X_0721400 24 FNKSERK|KL 0.080 . PY17X_0721400 25 NKSERKK|LT 0.143 . PY17X_0721400 32 LTFENEK|LN 0.057 . PY17X_0721400 57 GSPGSGK|TQ 0.060 . PY17X_0721400 71 CAEQLIK|IN 0.057 . PY17X_0721400 74 QLIKINK|EK 0.058 . PY17X_0721400 76 IKINKEK|KE 0.074 . PY17X_0721400 77 KINKEKK|ED 0.095 . PY17X_0721400 88 FYIYFNR|TF 0.082 . PY17X_0721400 94 RTFPIQR|LT 0.093 . PY17X_0721400 102 TTIIENK|LK 0.062 . PY17X_0721400 104 IIENKLK|FN 0.073 . PY17X_0721400 118 NYYIDEK|KT 0.057 . PY17X_0721400 119 YYIDEKK|TN 0.091 . PY17X_0721400 124 KKTNANK|LP 0.055 . PY17X_0721400 134 ANHIYSK|KY 0.070 . PY17X_0721400 135 NHIYSKK|YN 0.125 . PY17X_0721400 150 ENLFSFK|TN 0.060 . PY17X_0721400 153 FSFKTNK|ND 0.057 . PY17X_0721400 158 NKNDIVR|NL 0.091 . PY17X_0721400 168 ANLYIQK|IH 0.060 . PY17X_0721400 181 FFSLFQK|NI 0.074 . PY17X_0721400 188 NIHSILK|YN 0.067 . PY17X_0721400 191 SILKYNK|IS 0.061 . PY17X_0721400 214 ENLDSYK|KY 0.062 . PY17X_0721400 215 NLDSYKK|YQ 0.084 . PY17X_0721400 221 KYQLYIK|MS 0.055 . PY17X_0721400 227 KMSLILK|QI 0.073 . PY17X_0721400 247 NSSNINK|HY 0.074 . PY17X_0721400 273 NTVIIFK|KT 0.062 . PY17X_0721400 274 TVIIFKK|TK 0.107 . PY17X_0721400 276 IIFKKTK|KN 0.069 . PY17X_0721400 277 IFKKTKK|NN 0.151 . PY17X_0721400 283 KNNEQVR|KM 0.107 . PY17X_0721400 284 NNEQVRK|MF 0.087 . PY17X_0721400 288 VRKMFIK|CS 0.077 . PY17X_0721400 294 KCSEFLR|MY 0.108 . PY17X_0721400 297 EFLRMYK|TL 0.104 . ____________________________^_________________

  • Fasta :-

    >PY17X_0721400 ATGAATGAAAATACATGTAGGTCAATTGAACAAATATTCGAAGGTTCCACATTTAATAAA TCTGAAAGAAAAAAACTGACATTTGAAAATGAAAAACTTAATTTATTTTTCGAAAATGGA ATAATTAATTACAGTTTAATAGAACTAGTAGGATCTCCAGGAAGTGGAAAAACACAATTT GCTCTTACTTTGTGTGCAGAACAATTGATCAAAATAAATAAAGAAAAAAAGGAAGATATT GTTTTTTATATTTATTTTAATAGAACTTTTCCAATACAAAGACTTACAACCATAATAGAG AATAAATTGAAATTCAACGAAAATAATTATACCAATTATTATATAGACGAAAAAAAAACA AATGCAAACAAGTTGCCAAATGCAAATCATATTTATTCAAAAAAATATAATATAAACCAA AATGAACAAGAAAATCTCTTTTCATTTAAAACAAATAAAAATGACATTGTAAGAAATTTA TTAGCAAATTTATATATTCAAAAAATACATGACGAAAATGAATTTTTTTCATTATTTCAA AAAAATATACATAGTATTCTCAAATATAATAAAATTTCATTACTTGTAATTGATTCATTT AATTCTATACTTAATGGAAATGAAAATTTAGATAGTTATAAAAAATATCAACTATATATT AAAATGTCTTTAATTTTAAAACAAATATCATATGAAAATAATATCTTTATTATATTAATT AATAGTTCAAATATTAACAAACATTACTCAGATTTCTCTTTTAACATTTCCGATTTTATT ATCAACTCTTCATGTTCAAACACAGTTATTATTTTTAAAAAAACAAAAAAAAATAATGAA CAAGTCAGAAAAATGTTTATTAAATGTTCAGAATTTTTACGAATGTATAAAACACTTACA TTTCAGATCACTGACTCAGGTGTTGAGGCCCTATGA
  • Download Fasta

  • Fasta :-

    MNENTCRSIEQIFEGSTFNKSERKKLTFENEKLNLFFENGIINYSLIELVGSPGSGKTQF ALTLCAEQLIKINKEKKEDIVFYIYFNRTFPIQRLTTIIENKLKFNENNYTNYYIDEKKT NANKLPNANHIYSKKYNINQNEQENLFSFKTNKNDIVRNLLANLYIQKIHDENEFFSLFQ KNIHSILKYNKISLLVIDSFNSILNGNENLDSYKKYQLYIKMSLILKQISYENNIFIILI NSSNINKHYSDFSFNISDFIINSSCSNTVIIFKKTKKNNEQVRKMFIKCSEFLRMYKTLT FQITDSGVEAL

  • title: ATP binding site
  • coordinates: S52,G56,K57,T58,Y83,Y85,F86,D198,S199
No Results
No Results
IDSitePeptideScoreMethod
PY17X_0721400230 SLKQISYENN0.991unsp
PY17X_0721400


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India