PY17X_0810600 | 26S proteasome non-ATPase regulatory subunit 9, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0810600OTHER0.9999700.0000120.000018
No Results

  • Fasta :-

    >PY17X_0810600 MEINEFNELVKERECIENEIKENLEFLESPENKNIGMNGKLVDSEGFPRNDIDIYKIRIA RNKIICLKNDYLNINKKIEDYLHEIHSSKPAIRVERNKVNYSNSNENLNDIKPITNKEDI EFAKNNIFALVDEIVENSPSHKAGIKLNDQIFEFGDIKKEGNNTDIDNTNNIFKKISNFM KENPSKIQLKILRQEAIYHCNIFPDKTSTGLYIGCHLAPITK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0810600.fa Sequence name : PY17X_0810600 Sequence length : 222 VALUES OF COMPUTED PARAMETERS Coef20 : 3.197 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.129 0.588 -0.153 0.316 MesoH : -1.763 -0.481 -0.756 -0.011 MuHd_075 : 34.876 19.940 10.087 5.685 MuHd_095 : 5.978 2.851 1.613 0.757 MuHd_100 : 6.065 11.923 3.012 3.029 MuHd_105 : 21.137 21.092 8.098 5.329 Hmax_075 : -5.483 6.300 -1.864 2.042 Hmax_095 : -13.300 -0.350 -4.803 0.166 Hmax_100 : -13.300 3.800 -3.790 1.210 Hmax_105 : -5.200 11.800 -1.478 2.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9538 0.0462 DFMC : 0.9450 0.0550
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 222 PY17X_0810600 MEINEFNELVKERECIENEIKENLEFLESPENKNIGMNGKLVDSEGFPRNDIDIYKIRIARNKIICLKNDYLNINKKIED 80 YLHEIHSSKPAIRVERNKVNYSNSNENLNDIKPITNKEDIEFAKNNIFALVDEIVENSPSHKAGIKLNDQIFEFGDIKKE 160 GNNTDIDNTNNIFKKISNFMKENPSKIQLKILRQEAIYHCNIFPDKTSTGLYIGCHLAPITK 240 ................................................................................ 80 ................................................................................ 160 .............................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0810600 11 EFNELVK|ER 0.069 . PY17X_0810600 13 NELVKER|EC 0.096 . PY17X_0810600 21 CIENEIK|EN 0.058 . PY17X_0810600 33 LESPENK|NI 0.094 . PY17X_0810600 40 NIGMNGK|LV 0.081 . PY17X_0810600 49 DSEGFPR|ND 0.086 . PY17X_0810600 56 NDIDIYK|IR 0.059 . PY17X_0810600 58 IDIYKIR|IA 0.125 . PY17X_0810600 61 YKIRIAR|NK 0.235 . PY17X_0810600 63 IRIARNK|II 0.074 . PY17X_0810600 68 NKIICLK|ND 0.057 . PY17X_0810600 76 DYLNINK|KI 0.066 . PY17X_0810600 77 YLNINKK|IE 0.089 . PY17X_0810600 89 HEIHSSK|PA 0.084 . PY17X_0810600 93 SSKPAIR|VE 0.087 . PY17X_0810600 96 PAIRVER|NK 0.177 . PY17X_0810600 98 IRVERNK|VN 0.061 . PY17X_0810600 112 ENLNDIK|PI 0.069 . PY17X_0810600 117 IKPITNK|ED 0.058 . PY17X_0810600 124 EDIEFAK|NN 0.072 . PY17X_0810600 142 ENSPSHK|AG 0.079 . PY17X_0810600 146 SHKAGIK|LN 0.069 . PY17X_0810600 158 FEFGDIK|KE 0.057 . PY17X_0810600 159 EFGDIKK|EG 0.072 . PY17X_0810600 174 NTNNIFK|KI 0.073 . PY17X_0810600 175 TNNIFKK|IS 0.117 . PY17X_0810600 181 KISNFMK|EN 0.073 . PY17X_0810600 186 MKENPSK|IQ 0.081 . PY17X_0810600 190 PSKIQLK|IL 0.072 . PY17X_0810600 193 IQLKILR|QE 0.075 . PY17X_0810600 206 CNIFPDK|TS 0.059 . PY17X_0810600 222 HLAPITK|-- 0.065 . ____________________________^_________________

  • Fasta :-

    >PY17X_0810600 ATGGAGATAAACGAATTCAATGAACTTGTAAAAGAGCGTGAATGCATAGAAAATGAGATA AAAGAAAATCTCGAATTTTTAGAAAGCCCCGAAAATAAAAATATTGGAATGAATGGAAAA TTAGTAGATTCAGAAGGGTTCCCACGTAATGATATAGATATATATAAAATTCGAATTGCT AGAAATAAAATAATATGTCTAAAAAATGACTATTTAAATATAAATAAAAAAATAGAAGAT TACTTACATGAAATACATAGTTCAAAACCAGCTATAAGAGTAGAAAGGAATAAAGTAAAT TATTCAAATAGCAATGAAAATTTAAATGATATTAAACCAATAACTAACAAAGAAGATATT GAATTTGCAAAAAATAATATTTTTGCTTTGGTTGATGAAATTGTGGAAAATTCCCCATCT CATAAAGCGGGCATAAAACTTAATGATCAAATTTTCGAATTTGGAGATATAAAAAAAGAA GGAAATAATACTGATATAGATAATACAAATAATATATTTAAAAAAATATCAAATTTTATG AAAGAAAACCCTTCAAAAATTCAACTCAAAATATTAAGGCAAGAGGCTATATATCATTGT AACATTTTTCCTGATAAAACATCTACAGGTTTATATATTGGATGTCATTTAGCACCAATA ACAAAATGA
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  • Fasta :-

    MEINEFNELVKERECIENEIKENLEFLESPENKNIGMNGKLVDSEGFPRNDIDIYKIRIA RNKIICLKNDYLNINKKIEDYLHEIHSSKPAIRVERNKVNYSNSNENLNDIKPITNKEDI EFAKNNIFALVDEIVENSPSHKAGIKLNDQIFEFGDIKKEGNNTDIDNTNNIFKKISNFM KENPSKIQLKILRQEAIYHCNIFPDKTSTGLYIGCHLAPITK

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PY17X_0810600


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India