PY17X_0811400 | proteasome subunit alpha type-3, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0811400OTHER0.9994210.0005000.000079
No Results

  • Fasta :-

    >PY17X_0811400 MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINNNNTSISLECKDGVISCSINTSLEKNKM IKKNSYNRIYYVNNNIIITYAGLDGDARNIIDRIKSEANNYFLNFHTNIPLHILANRISL YIHAYTLYWHLRPFASSIIISSYDKNEKGEIYCIEPSGACYKYYGVVIGKNKELFKTEIE KKNYKHISVREALVDIYKFILSSDDHINKDNISHLVNFSWICEESSFESQTIDQEILDNA LKVAVESVNQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0811400.fa Sequence name : PY17X_0811400 Sequence length : 250 VALUES OF COMPUTED PARAMETERS Coef20 : 3.707 CoefTot : -0.141 ChDiff : -3 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.824 0.882 0.034 0.411 MesoH : -0.675 0.156 -0.411 0.210 MuHd_075 : 23.497 12.390 4.947 3.001 MuHd_095 : 9.262 6.029 2.442 2.046 MuHd_100 : 4.187 5.142 0.585 1.413 MuHd_105 : 5.257 2.255 1.425 0.842 Hmax_075 : 15.517 10.267 1.459 3.885 Hmax_095 : 13.000 9.800 1.586 4.440 Hmax_100 : 13.000 9.800 1.283 3.940 Hmax_105 : 10.033 5.250 1.204 3.768 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9132 0.0868 DFMC : 0.8608 0.1392
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 250 PY17X_0811400 MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINNNNTSISLECKDGVISCSINTSLEKNKMIKKNSYNRIYYVNNNIIITY 80 AGLDGDARNIIDRIKSEANNYFLNFHTNIPLHILANRISLYIHAYTLYWHLRPFASSIIISSYDKNEKGEIYCIEPSGAC 160 YKYYGVVIGKNKELFKTEIEKKNYKHISVREALVDIYKFILSSDDHINKDNISHLVNFSWICEESSFESQTIDQEILDNA 240 LKVAVESVNQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0811400 20 TFSPDGR|LY 0.091 . PY17X_0811400 29 QVEYIYK|AI 0.064 . PY17X_0811400 43 SISLECK|DG 0.071 . PY17X_0811400 57 INTSLEK|NK 0.058 . PY17X_0811400 59 TSLEKNK|MI 0.068 . PY17X_0811400 62 EKNKMIK|KN 0.072 . PY17X_0811400 63 KNKMIKK|NS 0.081 . PY17X_0811400 68 KKNSYNR|IY 0.089 . PY17X_0811400 88 GLDGDAR|NI 0.098 . PY17X_0811400 93 ARNIIDR|IK 0.129 . PY17X_0811400 95 NIIDRIK|SE 0.066 . PY17X_0811400 117 LHILANR|IS 0.076 . PY17X_0811400 132 TLYWHLR|PF 0.106 . PY17X_0811400 145 IISSYDK|NE 0.059 . PY17X_0811400 148 SYDKNEK|GE 0.059 . PY17X_0811400 162 PSGACYK|YY 0.085 . PY17X_0811400 170 YGVVIGK|NK 0.058 . PY17X_0811400 172 VVIGKNK|EL 0.067 . PY17X_0811400 176 KNKELFK|TE 0.061 . PY17X_0811400 181 FKTEIEK|KN 0.060 . PY17X_0811400 182 KTEIEKK|NY 0.085 . PY17X_0811400 185 IEKKNYK|HI 0.073 . PY17X_0811400 190 YKHISVR|EA 0.099 . PY17X_0811400 198 ALVDIYK|FI 0.067 . PY17X_0811400 209 SDDHINK|DN 0.073 . PY17X_0811400 242 ILDNALK|VA 0.060 . ____________________________^_________________

  • Fasta :-

    >PY17X_0811400 ATGGCAGGATTAAGTGCAGGGTATGATTTATCTGTATCGACATTTTCACCAGATGGTAGA CTTTATCAAGTTGAATATATTTATAAAGCAATAAATAATAACAACACTTCTATATCTTTA GAATGCAAAGATGGTGTTATTAGCTGTTCTATAAATACATCATTGGAAAAAAATAAAATG ATAAAAAAAAATAGTTATAATAGAATATATTATGTTAATAATAATATTATAATAACATAT GCTGGTTTAGATGGTGATGCAAGAAATATAATTGATAGAATAAAAAGTGAAGCAAATAAT TATTTTTTAAATTTTCATACAAATATACCATTACACATTTTAGCTAATAGAATATCTTTA TATATACATGCCTATACATTATATTGGCATTTAAGACCATTTGCTTCCTCAATAATTATA TCATCTTATGATAAAAATGAAAAAGGTGAAATATATTGTATCGAGCCAAGTGGTGCATGT TACAAATATTACGGAGTAGTAATCGGAAAAAATAAAGAATTATTTAAAACAGAAATTGAA AAGAAAAATTATAAACATATAAGTGTTAGAGAAGCCTTAGTAGATATATATAAATTTATT TTAAGTAGTGATGATCATATAAATAAAGATAATATTTCACACTTGGTAAACTTTTCATGG ATATGTGAAGAATCATCATTTGAATCTCAAACAATTGATCAGGAAATTTTAGATAACGCT TTGAAAGTTGCTGTAGAATCAGTTAATCAATAA
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  • Fasta :-

    MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINNNNTSISLECKDGVISCSINTSLEKNKM IKKNSYNRIYYVNNNIIITYAGLDGDARNIIDRIKSEANNYFLNFHTNIPLHILANRISL YIHAYTLYWHLRPFASSIIISSYDKNEKGEIYCIEPSGACYKYYGVVIGKNKELFKTEIE KKNYKHISVREALVDIYKFILSSDDHINKDNISHLVNFSWICEESSFESQTIDQEILDNA LKVAVESVNQ

  • title: active site
  • coordinates: N35,E56,N58,R68
No Results
No Results
No Results
PY17X_0811400


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India