PY17X_0836000 | proteasome subunit beta type-6, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0836000OTHER0.9999860.0000120.000002
No Results

  • Fasta :-

    >PY17X_0836000 MEIEPMKIYNINQDSINNEYNIRTPISDGTTIIGIIYEHGVMLACDTRTSSGTFVSNKCS RKINRINENIYVCRSGASAHSQKVIEVIKHYCASMKSENRKKGRFHENEVITDDINDEEI DINQINNINNNNVIAKNKYYYDDKFMDYNPLVENVAYITKKLVYANNNFLSCGLIFGGYD KIKKQQLYSVNLNGSIIQKYDYAVSGSGSIYIQSYLQDKYKKNMTKKECFDLILNCVKYA IYNDNSSGGIVRILNITKNYVEEYTVTNTQIHFDY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0836000.fa Sequence name : PY17X_0836000 Sequence length : 275 VALUES OF COMPUTED PARAMETERS Coef20 : 2.919 CoefTot : 0.000 ChDiff : 1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.271 0.161 0.577 MesoH : -0.894 -0.030 -0.446 0.151 MuHd_075 : 21.730 13.698 5.423 3.111 MuHd_095 : 21.345 15.744 6.965 4.208 MuHd_100 : 21.476 10.800 6.082 3.772 MuHd_105 : 20.019 6.965 5.532 3.239 Hmax_075 : 6.417 2.800 -1.534 2.147 Hmax_095 : 0.300 7.600 -1.500 3.140 Hmax_100 : 4.500 3.700 -0.866 2.860 Hmax_105 : -3.967 3.033 -2.991 2.462 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9719 0.0281 DFMC : 0.9743 0.0257
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 275 PY17X_0836000 MEIEPMKIYNINQDSINNEYNIRTPISDGTTIIGIIYEHGVMLACDTRTSSGTFVSNKCSRKINRINENIYVCRSGASAH 80 SQKVIEVIKHYCASMKSENRKKGRFHENEVITDDINDEEIDINQINNINNNNVIAKNKYYYDDKFMDYNPLVENVAYITK 160 KLVYANNNFLSCGLIFGGYDKIKKQQLYSVNLNGSIIQKYDYAVSGSGSIYIQSYLQDKYKKNMTKKECFDLILNCVKYA 240 IYNDNSSGGIVRILNITKNYVEEYTVTNTQIHFDY 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0836000 7 MEIEPMK|IY 0.070 . PY17X_0836000 23 NNEYNIR|TP 0.077 . PY17X_0836000 48 MLACDTR|TS 0.092 . PY17X_0836000 58 GTFVSNK|CS 0.070 . PY17X_0836000 61 VSNKCSR|KI 0.110 . PY17X_0836000 62 SNKCSRK|IN 0.106 . PY17X_0836000 65 CSRKINR|IN 0.114 . PY17X_0836000 74 ENIYVCR|SG 0.119 . PY17X_0836000 83 ASAHSQK|VI 0.082 . PY17X_0836000 89 KVIEVIK|HY 0.071 . PY17X_0836000 96 HYCASMK|SE 0.083 . PY17X_0836000 100 SMKSENR|KK 0.087 . PY17X_0836000 101 MKSENRK|KG 0.106 . PY17X_0836000 102 KSENRKK|GR 0.112 . PY17X_0836000 104 ENRKKGR|FH 0.165 . PY17X_0836000 136 NNNVIAK|NK 0.072 . PY17X_0836000 138 NVIAKNK|YY 0.073 . PY17X_0836000 144 KYYYDDK|FM 0.064 . PY17X_0836000 160 NVAYITK|KL 0.061 . PY17X_0836000 161 VAYITKK|LV 0.132 . PY17X_0836000 181 IFGGYDK|IK 0.062 . PY17X_0836000 183 GGYDKIK|KQ 0.060 . PY17X_0836000 184 GYDKIKK|QQ 0.074 . PY17X_0836000 199 NGSIIQK|YD 0.074 . PY17X_0836000 219 QSYLQDK|YK 0.066 . PY17X_0836000 221 YLQDKYK|KN 0.075 . PY17X_0836000 222 LQDKYKK|NM 0.103 . PY17X_0836000 226 YKKNMTK|KE 0.060 . PY17X_0836000 227 KKNMTKK|EC 0.135 . PY17X_0836000 238 LILNCVK|YA 0.066 . PY17X_0836000 252 SSGGIVR|IL 0.087 . PY17X_0836000 258 RILNITK|NY 0.058 . ____________________________^_________________

  • Fasta :-

    >PY17X_0836000 ATGGAGATAGAACCCATGAAAATATATAACATAAATCAAGATTCGATTAATAATGAATAT AATATTAGAACCCCTATTTCTGATGGTACAACAATTATTGGAATAATTTATGAACATGGT GTTATGTTAGCTTGTGATACTCGAACATCATCTGGAACATTTGTTAGTAATAAGTGTTCA AGAAAAATAAATAGAATCAATGAAAATATTTATGTATGTAGAAGTGGTGCATCTGCACAT AGCCAAAAAGTAATTGAAGTAATAAAACATTATTGTGCATCTATGAAAAGTGAAAATCGA AAAAAAGGTCGATTTCATGAAAATGAAGTTATAACAGATGATATAAATGATGAAGAAATT GATATTAACCAAATTAATAATATAAATAATAACAATGTAATAGCTAAAAATAAATATTAT TATGATGATAAATTTATGGATTATAATCCCTTAGTAGAAAATGTTGCATACATAACAAAA AAACTTGTTTATGCAAATAATAACTTTTTATCATGTGGTTTAATATTTGGTGGTTATGAT AAAATAAAAAAACAACAATTATATTCTGTTAATTTAAATGGTAGTATAATTCAAAAATAT GATTATGCAGTTAGTGGAAGTGGAAGTATTTATATTCAATCATATTTACAAGATAAATAT AAAAAAAATATGACAAAAAAAGAATGTTTTGATCTTATTTTAAATTGTGTTAAATATGCT ATATATAATGATAATAGTAGTGGTGGAATTGTAAGAATTTTAAATATAACCAAAAATTAT GTAGAAGAATATACTGTTACCAATACTCAAATACATTTTGATTATTAA
  • Download Fasta

  • Fasta :-

    MEIEPMKIYNINQDSINNEYNIRTPISDGTTIIGIIYEHGVMLACDTRTSSGTFVSNKCS RKINRINENIYVCRSGASAHSQKVIEVIKHYCASMKSENRKKGRFHENEVITDDINDEEI DINQINNINNNNVIAKNKYYYDDKFMDYNPLVENVAYITKKLVYANNNFLSCGLIFGGYD KIKKQQLYSVNLNGSIIQKYDYAVSGSGSIYIQSYLQDKYKKNMTKKECFDLILNCVKYA IYNDNSSGGIVRILNITKNYVEEYTVTNTQIHFDY

    No Results
  • title: active site
  • coordinates: T30,D46,R48,K62
No Results
No Results
IDSitePeptideScoreMethod
PY17X_083600081 SASAHSQKVI0.995unsp
PY17X_0836000


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India