PY17X_0907400 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PY17X_0907400OTHER0.9953050.0001260.004568
No Results

  • Fasta :-

    >PY17X_0907400 MSGLLYKLNKFYRINENIYNSFSCGNNILNYKSKGKICTINGKCVNKNKAFFSYGSYNND DKEIVDMIDGISFTIRNNSSIYKEETNNIPILLLHGCYGSKKNFRNFNKMLKSNKIISLD LPNHGESKHTDDMKYNNIEEDIKNVLNKLNIKSCCLVGFSLGGKVSMYTALKNPQLFSHL IIMDILPYNYHSNNIEIALPYSIKKMSKTLYNIKINKNPKNKLEFLKYLKEELPDIPDSF SQFICMSLKENEQKNKLTWNINVETIYNEIHNITNFPLNYEKYKYTKPCSFVIAKKSDLA YTIPDYDQIIKNFFPFSKNYILENSSHAVYVDAPHECAQIINQTIIL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0907400.fa Sequence name : PY17X_0907400 Sequence length : 347 VALUES OF COMPUTED PARAMETERS Coef20 : 3.627 CoefTot : -3.501 ChDiff : 11 ZoneTo : 59 KR : 9 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.188 1.182 0.230 0.473 MesoH : -0.567 0.220 -0.435 0.193 MuHd_075 : 29.687 27.256 11.199 6.627 MuHd_095 : 32.026 22.319 8.317 7.696 MuHd_100 : 39.643 28.776 11.494 9.692 MuHd_105 : 44.538 31.392 13.064 10.160 Hmax_075 : 13.067 16.217 4.916 5.332 Hmax_095 : 8.700 12.600 2.424 4.500 Hmax_100 : 12.600 18.900 4.004 6.000 Hmax_105 : 12.200 18.550 5.553 5.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2163 0.7837 DFMC : 0.3342 0.6658 This protein is probably imported in chloroplast. f(Ser) = 0.1017 f(Arg) = 0.0169 CMi = 1.08499 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 347 PY17X_0907400 MSGLLYKLNKFYRINENIYNSFSCGNNILNYKSKGKICTINGKCVNKNKAFFSYGSYNNDDKEIVDMIDGISFTIRNNSS 80 IYKEETNNIPILLLHGCYGSKKNFRNFNKMLKSNKIISLDLPNHGESKHTDDMKYNNIEEDIKNVLNKLNIKSCCLVGFS 160 LGGKVSMYTALKNPQLFSHLIIMDILPYNYHSNNIEIALPYSIKKMSKTLYNIKINKNPKNKLEFLKYLKEELPDIPDSF 240 SQFICMSLKENEQKNKLTWNINVETIYNEIHNITNFPLNYEKYKYTKPCSFVIAKKSDLAYTIPDYDQIIKNFFPFSKNY 320 ILENSSHAVYVDAPHECAQIINQTIIL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0907400 7 MSGLLYK|LN 0.060 . PY17X_0907400 10 LLYKLNK|FY 0.077 . PY17X_0907400 13 KLNKFYR|IN 0.144 . PY17X_0907400 32 NNILNYK|SK 0.088 . PY17X_0907400 34 ILNYKSK|GK 0.086 . PY17X_0907400 36 NYKSKGK|IC 0.068 . PY17X_0907400 43 ICTINGK|CV 0.071 . PY17X_0907400 47 NGKCVNK|NK 0.056 . PY17X_0907400 49 KCVNKNK|AF 0.071 . PY17X_0907400 62 SYNNDDK|EI 0.073 . PY17X_0907400 76 GISFTIR|NN 0.142 . PY17X_0907400 83 NNSSIYK|EE 0.068 . PY17X_0907400 101 HGCYGSK|KN 0.061 . PY17X_0907400 102 GCYGSKK|NF 0.097 . PY17X_0907400 105 GSKKNFR|NF 0.128 . PY17X_0907400 109 NFRNFNK|ML 0.064 . PY17X_0907400 112 NFNKMLK|SN 0.073 . PY17X_0907400 115 KMLKSNK|II 0.070 . PY17X_0907400 128 PNHGESK|HT 0.075 . PY17X_0907400 134 KHTDDMK|YN 0.080 . PY17X_0907400 143 NIEEDIK|NV 0.065 . PY17X_0907400 148 IKNVLNK|LN 0.073 . PY17X_0907400 152 LNKLNIK|SC 0.079 . PY17X_0907400 164 GFSLGGK|VS 0.055 . PY17X_0907400 172 SMYTALK|NP 0.052 . PY17X_0907400 204 ALPYSIK|KM 0.066 . PY17X_0907400 205 LPYSIKK|MS 0.099 . PY17X_0907400 208 SIKKMSK|TL 0.066 . PY17X_0907400 214 KTLYNIK|IN 0.053 . PY17X_0907400 217 YNIKINK|NP 0.059 . PY17X_0907400 220 KINKNPK|NK 0.065 . PY17X_0907400 222 NKNPKNK|LE 0.062 . PY17X_0907400 227 NKLEFLK|YL 0.078 . PY17X_0907400 230 EFLKYLK|EE 0.052 . PY17X_0907400 249 FICMSLK|EN 0.067 . PY17X_0907400 254 LKENEQK|NK 0.062 . PY17X_0907400 256 ENEQKNK|LT 0.069 . PY17X_0907400 282 FPLNYEK|YK 0.067 . PY17X_0907400 284 LNYEKYK|YT 0.084 . PY17X_0907400 287 EKYKYTK|PC 0.069 . PY17X_0907400 295 CSFVIAK|KS 0.066 . PY17X_0907400 296 SFVIAKK|SD 0.106 . PY17X_0907400 311 DYDQIIK|NF 0.055 . PY17X_0907400 318 NFFPFSK|NY 0.060 . ____________________________^_________________

  • Fasta :-

    >PY17X_0907400 ATGAGTGGCTTGTTATATAAGTTAAACAAATTTTATCGGATAAATGAAAATATATATAAT TCATTTAGCTGTGGAAATAATATTTTGAATTATAAATCTAAAGGTAAAATATGCACAATA AATGGAAAATGTGTAAATAAAAATAAAGCATTTTTTTCTTATGGGTCATATAATAATGAT GATAAAGAAATTGTAGATATGATTGATGGAATATCTTTTACAATACGTAATAATAGTAGT ATATATAAAGAAGAGACAAATAATATTCCTATTTTATTATTACATGGTTGTTATGGAAGT AAAAAAAATTTCCGTAATTTTAATAAAATGCTTAAATCAAATAAAATAATATCATTAGAC TTACCAAATCATGGAGAATCTAAACATACAGATGATATGAAATATAATAATATAGAAGAA GATATAAAAAATGTATTAAATAAATTAAATATAAAAAGTTGTTGTTTAGTTGGTTTTAGT TTGGGAGGAAAAGTATCAATGTATACTGCATTAAAAAATCCTCAATTATTTTCACATTTA ATAATAATGGATATATTACCTTATAATTATCATTCTAATAATATAGAAATTGCATTACCT TATAGTATTAAAAAAATGAGTAAAACATTATATAATATAAAAATAAATAAAAACCCGAAA AATAAATTAGAATTTTTAAAATATTTAAAGGAAGAATTACCAGACATTCCCGATTCATTT TCACAATTTATTTGTATGTCACTTAAAGAAAATGAACAAAAAAATAAATTAACATGGAAT ATAAATGTTGAAACTATATATAATGAAATACATAATATTACAAATTTTCCATTAAATTAT GAAAAATATAAATATACGAAACCTTGTAGTTTTGTTATAGCAAAAAAATCAGACCTAGCT TATACTATTCCCGATTATGATCAAATTATTAAAAATTTTTTTCCTTTCTCTAAAAATTAT ATTTTGGAAAATTCATCTCATGCTGTATATGTAGACGCACCCCATGAGTGCGCTCAAATT ATTAACCAGACAATTATCTTATAA
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  • Fasta :-

    MSGLLYKLNKFYRINENIYNSFSCGNNILNYKSKGKICTINGKCVNKNKAFFSYGSYNND DKEIVDMIDGISFTIRNNSSIYKEETNNIPILLLHGCYGSKKNFRNFNKMLKSNKIISLD LPNHGESKHTDDMKYNNIEEDIKNVLNKLNIKSCCLVGFSLGGKVSMYTALKNPQLFSHL IIMDILPYNYHSNNIEIALPYSIKKMSKTLYNIKINKNPKNKLEFLKYLKEELPDIPDSF SQFICMSLKENEQKNKLTWNINVETIYNEIHNITNFPLNYEKYKYTKPCSFVIAKKSDLA YTIPDYDQIIKNFFPFSKNYILENSSHAVYVDAPHECAQIINQTIIL

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PY17X_0907400


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India