PY17X_0921600 | GPI-anchor transamidase, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0921600SP0.0234060.9761780.000416CS pos: 20-21. AIG-SV. Pr: 0.9323
No Results

  • Fasta :-

    >PY17X_0921600 MEIRIGIVIYLLVAIKCAIGSVYFSGIDIKNMKSKYEEIKNNNNNNNNKINEIFLKEIEK YNYMNSNVIALSTSRHYFNYRHTANLLIAYKYLKKNGDIMDKNILLMIPFDQACNCRNII EGTIFKNYEKLPNEYINKNMKENLYNKLNIDYKNDNINDEQLKKVIRHRNNSFTPYNNRL YTNEYKKKNLFIYITGHGGINFLKIQEFSIISSSEFNLYIQELLIKKIYKNIFVIIDTCQ GYSFYDDILRFINKNKIKNVFLLSSSNRHENSYSFFSSKYLSVSTVDRFTYNFFDYMENI HKMESKEIYKNLKFFSIQNILNYLKTKNLMSHPSINNSKLNVSSFLHDQNVIFYDSTMLF PKLFYNKLNKNDKNDYPNNNHDHIHSEHTCFGYLGICGHIKSQIYLNMESLYNDRSYYNN DDVYNSYEFYFTDKYFYFKYFDIYYMGIFLILLFVILLFLIVYMLY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0921600.fa Sequence name : PY17X_0921600 Sequence length : 466 VALUES OF COMPUTED PARAMETERS Coef20 : 4.340 CoefTot : -0.525 ChDiff : 12 ZoneTo : 27 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.935 3.476 0.626 1.125 MesoH : -0.468 0.410 -0.351 0.320 MuHd_075 : 14.151 15.187 4.697 5.130 MuHd_095 : 14.488 12.804 4.155 4.013 MuHd_100 : 12.914 17.192 3.749 3.930 MuHd_105 : 14.071 19.061 3.899 4.493 Hmax_075 : 16.567 24.150 5.669 6.760 Hmax_095 : 15.487 24.675 4.510 7.753 Hmax_100 : 18.900 29.500 4.519 8.600 Hmax_105 : 20.183 27.387 5.808 8.067 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9930 0.0070 DFMC : 0.9981 0.0019
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 466 PY17X_0921600 MEIRIGIVIYLLVAIKCAIGSVYFSGIDIKNMKSKYEEIKNNNNNNNNKINEIFLKEIEKYNYMNSNVIALSTSRHYFNY 80 RHTANLLIAYKYLKKNGDIMDKNILLMIPFDQACNCRNIIEGTIFKNYEKLPNEYINKNMKENLYNKLNIDYKNDNINDE 160 QLKKVIRHRNNSFTPYNNRLYTNEYKKKNLFIYITGHGGINFLKIQEFSIISSSEFNLYIQELLIKKIYKNIFVIIDTCQ 240 GYSFYDDILRFINKNKIKNVFLLSSSNRHENSYSFFSSKYLSVSTVDRFTYNFFDYMENIHKMESKEIYKNLKFFSIQNI 320 LNYLKTKNLMSHPSINNSKLNVSSFLHDQNVIFYDSTMLFPKLFYNKLNKNDKNDYPNNNHDHIHSEHTCFGYLGICGHI 400 KSQIYLNMESLYNDRSYYNNDDVYNSYEFYFTDKYFYFKYFDIYYMGIFLILLFVILLFLIVYMLY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0921600 4 ---MEIR|IG 0.075 . PY17X_0921600 16 YLLVAIK|CA 0.062 . PY17X_0921600 30 FSGIDIK|NM 0.058 . PY17X_0921600 33 IDIKNMK|SK 0.084 . PY17X_0921600 35 IKNMKSK|YE 0.096 . PY17X_0921600 40 SKYEEIK|NN 0.068 . PY17X_0921600 49 NNNNNNK|IN 0.077 . PY17X_0921600 56 INEIFLK|EI 0.082 . PY17X_0921600 60 FLKEIEK|YN 0.061 . PY17X_0921600 75 IALSTSR|HY 0.091 . PY17X_0921600 81 RHYFNYR|HT 0.098 . PY17X_0921600 91 NLLIAYK|YL 0.070 . PY17X_0921600 94 IAYKYLK|KN 0.073 . PY17X_0921600 95 AYKYLKK|NG 0.082 . PY17X_0921600 102 NGDIMDK|NI 0.057 . PY17X_0921600 117 DQACNCR|NI 0.104 . PY17X_0921600 126 IEGTIFK|NY 0.064 . PY17X_0921600 130 IFKNYEK|LP 0.054 . PY17X_0921600 138 PNEYINK|NM 0.057 . PY17X_0921600 141 YINKNMK|EN 0.059 . PY17X_0921600 147 KENLYNK|LN 0.062 . PY17X_0921600 153 KLNIDYK|ND 0.066 . PY17X_0921600 163 INDEQLK|KV 0.074 . PY17X_0921600 164 NDEQLKK|VI 0.090 . PY17X_0921600 167 QLKKVIR|HR 0.086 . PY17X_0921600 169 KKVIRHR|NN 0.092 . PY17X_0921600 179 FTPYNNR|LY 0.069 . PY17X_0921600 186 LYTNEYK|KK 0.055 . PY17X_0921600 187 YTNEYKK|KN 0.082 . PY17X_0921600 188 TNEYKKK|NL 0.157 . PY17X_0921600 204 GGINFLK|IQ 0.066 . PY17X_0921600 226 IQELLIK|KI 0.064 . PY17X_0921600 227 QELLIKK|IY 0.075 . PY17X_0921600 230 LIKKIYK|NI 0.083 . PY17X_0921600 250 FYDDILR|FI 0.074 . PY17X_0921600 254 ILRFINK|NK 0.063 . PY17X_0921600 256 RFINKNK|IK 0.069 . PY17X_0921600 258 INKNKIK|NV 0.081 . PY17X_0921600 268 LLSSSNR|HE 0.094 . PY17X_0921600 279 YSFFSSK|YL 0.080 . PY17X_0921600 288 SVSTVDR|FT 0.134 . PY17X_0921600 302 YMENIHK|ME 0.060 . PY17X_0921600 306 IHKMESK|EI 0.083 . PY17X_0921600 310 ESKEIYK|NL 0.054 . PY17X_0921600 313 EIYKNLK|FF 0.070 . PY17X_0921600 325 NILNYLK|TK 0.051 . PY17X_0921600 327 LNYLKTK|NL 0.067 . PY17X_0921600 339 PSINNSK|LN 0.059 . PY17X_0921600 362 STMLFPK|LF 0.067 . PY17X_0921600 367 PKLFYNK|LN 0.056 . PY17X_0921600 370 FYNKLNK|ND 0.056 . PY17X_0921600 373 KLNKNDK|ND 0.068 . PY17X_0921600 401 GICGHIK|SQ 0.077 . PY17X_0921600 415 ESLYNDR|SY 0.094 . PY17X_0921600 434 EFYFTDK|YF 0.064 . PY17X_0921600 439 DKYFYFK|YF 0.080 . ____________________________^_________________

  • Fasta :-

    >PY17X_0921600 ATGGAGATAAGAATTGGAATAGTTATATATTTATTGGTAGCAATAAAATGTGCAATTGGA TCTGTTTATTTTTCTGGTATAGACATAAAAAATATGAAAAGTAAATATGAAGAAATAAAA AATAACAATAATAATAATAATAATAAAATAAATGAAATATTTTTAAAAGAAATAGAAAAA TATAATTATATGAATAGTAATGTTATAGCATTAAGTACATCAAGACATTATTTTAATTAC AGACATACAGCTAATTTATTAATTGCATATAAATATTTAAAAAAAAATGGAGATATTATG GATAAAAATATTTTACTTATGATACCATTTGATCAAGCTTGTAATTGTAGAAATATTATA GAAGGTACAATTTTCAAAAATTATGAAAAACTTCCAAATGAATATATTAATAAAAATATG AAAGAAAATTTATATAATAAATTAAATATCGATTATAAAAATGATAATATAAATGATGAA CAATTAAAAAAAGTTATAAGACATAGAAATAACAGTTTTACACCATATAATAATAGATTA TATACAAACGAATATAAAAAAAAAAATTTATTTATTTATATTACAGGACATGGTGGAATA AATTTTTTAAAAATTCAAGAATTTAGTATTATAAGTTCTTCTGAATTTAATTTATATATT CAAGAATTACTTATAAAAAAAATATATAAAAATATTTTTGTAATAATTGATACATGTCAA GGTTATAGTTTTTATGATGATATATTAAGATTTATAAATAAAAATAAAATAAAAAATGTT TTTTTATTATCATCATCTAATAGACATGAAAACAGCTATAGTTTTTTTTCAAGTAAATAT TTAAGTGTTTCAACAGTAGATAGATTTACTTATAATTTTTTTGATTATATGGAAAATATA CATAAAATGGAATCAAAAGAAATATATAAAAATTTGAAATTTTTTTCGATACAAAATATA TTAAATTATTTAAAAACCAAAAATTTAATGTCACATCCCTCAATAAATAATTCAAAATTA AATGTATCATCATTTTTGCATGATCAAAATGTTATCTTTTACGATTCAACCATGTTGTTT CCAAAATTGTTTTATAACAAACTTAATAAAAATGATAAAAATGATTATCCTAACAATAAT CATGATCATATTCATTCCGAACATACCTGTTTTGGTTATTTAGGCATATGTGGTCATATA AAAAGTCAAATATATTTAAATATGGAAAGTTTATACAACGATCGAAGCTATTACAACAAT GATGATGTGTATAATAGTTATGAATTTTATTTTACTGATAAATATTTTTATTTTAAATAT TTTGATATATATTATATGGGAATTTTTTTGATTTTGTTATTTGTTATTTTACTTTTTCTT ATAGTATATATGTTATACTAA
  • Download Fasta

  • Fasta :-

    MEIRIGIVIYLLVAIKCAIGSVYFSGIDIKNMKSKYEEIKNNNNNNNNKINEIFLKEIEK YNYMNSNVIALSTSRHYFNYRHTANLLIAYKYLKKNGDIMDKNILLMIPFDQACNCRNII EGTIFKNYEKLPNEYINKNMKENLYNKLNIDYKNDNINDEQLKKVIRHRNNSFTPYNNRL YTNEYKKKNLFIYITGHGGINFLKIQEFSIISSSEFNLYIQELLIKKIYKNIFVIIDTCQ GYSFYDDILRFINKNKIKNVFLLSSSNRHENSYSFFSSKYLSVSTVDRFTYNFFDYMENI HKMESKEIYKNLKFFSIQNILNYLKTKNLMSHPSINNSKLNVSSFLHDQNVIFYDSTMLF PKLFYNKLNKNDKNDYPNNNHDHIHSEHTCFGYLGICGHIKSQIYLNMESLYNDRSYYNN DDVYNSYEFYFTDKYFYFKYFDIYYMGIFLILLFVILLFLIVYMLY

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_092160025 SSVYFSGIDI0.995unspPY17X_092160034 SKNMKSKYEE0.991unsp
PY17X_0921600


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India