PY17X_0933800 | pyridoxine biosynthesis protein PDX2, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0933800OTHER0.9665650.0252470.008187
No Results

  • Fasta :-

    >PY17X_0933800 MEKITIGVLSLQGNFQSHINHFLQLQNPSLKVIEVRNKTDLRECDGIVIPGGESTTLRKC MSYDSDSLYNALKNYIHVKKKPVWGTCAGCILLSEKVEKTKDDNIENEYGNEFSLGGLDI EITRNYYGSQNDSFICSLDIKSQDPIFKKNIRAPCIRAPFIKTISSDKVVTIATFSHESF GKNIIGAVEQDNCMGTVFHPELMPYTCFHEYFLEKVKKHIKNSGEA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0933800.fa Sequence name : PY17X_0933800 Sequence length : 226 VALUES OF COMPUTED PARAMETERS Coef20 : 3.564 CoefTot : -1.766 ChDiff : -1 ZoneTo : 33 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.688 0.794 -0.091 0.368 MesoH : -0.776 0.124 -0.434 0.153 MuHd_075 : 22.741 16.161 7.482 4.987 MuHd_095 : 24.528 21.191 6.927 6.014 MuHd_100 : 28.760 23.701 8.853 7.075 MuHd_105 : 29.713 23.804 10.078 7.067 Hmax_075 : 16.917 16.450 0.211 3.940 Hmax_095 : 8.400 16.012 -0.388 6.282 Hmax_100 : 12.600 18.400 1.682 5.170 Hmax_105 : 12.717 15.500 0.601 3.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8764 0.1236 DFMC : 0.8607 0.1393
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 226 PY17X_0933800 MEKITIGVLSLQGNFQSHINHFLQLQNPSLKVIEVRNKTDLRECDGIVIPGGESTTLRKCMSYDSDSLYNALKNYIHVKK 80 KPVWGTCAGCILLSEKVEKTKDDNIENEYGNEFSLGGLDIEITRNYYGSQNDSFICSLDIKSQDPIFKKNIRAPCIRAPF 160 IKTISSDKVVTIATFSHESFGKNIIGAVEQDNCMGTVFHPELMPYTCFHEYFLEKVKKHIKNSGEA 240 ................................................................................ 80 ................................................................................ 160 .................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0933800 3 ----MEK|IT 0.067 . PY17X_0933800 31 LQNPSLK|VI 0.070 . PY17X_0933800 36 LKVIEVR|NK 0.099 . PY17X_0933800 38 VIEVRNK|TD 0.058 . PY17X_0933800 42 RNKTDLR|EC 0.088 . PY17X_0933800 58 GESTTLR|KC 0.099 . PY17X_0933800 59 ESTTLRK|CM 0.071 . PY17X_0933800 73 SLYNALK|NY 0.064 . PY17X_0933800 79 KNYIHVK|KK 0.068 . PY17X_0933800 80 NYIHVKK|KP 0.092 . PY17X_0933800 81 YIHVKKK|PV 0.186 . PY17X_0933800 96 CILLSEK|VE 0.057 . PY17X_0933800 99 LSEKVEK|TK 0.077 . PY17X_0933800 101 EKVEKTK|DD 0.074 . PY17X_0933800 124 LDIEITR|NY 0.085 . PY17X_0933800 141 ICSLDIK|SQ 0.093 . PY17X_0933800 148 SQDPIFK|KN 0.063 . PY17X_0933800 149 QDPIFKK|NI 0.089 . PY17X_0933800 152 IFKKNIR|AP 0.077 . PY17X_0933800 157 IRAPCIR|AP 0.107 . PY17X_0933800 162 IRAPFIK|TI 0.083 . PY17X_0933800 168 KTISSDK|VV 0.074 . PY17X_0933800 182 SHESFGK|NI 0.077 . PY17X_0933800 215 HEYFLEK|VK 0.062 . PY17X_0933800 217 YFLEKVK|KH 0.054 . PY17X_0933800 218 FLEKVKK|HI 0.141 . PY17X_0933800 221 KVKKHIK|NS 0.073 . ____________________________^_________________

  • Fasta :-

    >PY17X_0933800 ATGGAAAAAATAACTATAGGTGTTTTATCTCTACAAGGAAATTTCCAATCACATATAAAT CATTTTCTTCAGTTACAAAATCCATCACTTAAAGTTATAGAGGTTAGGAATAAAACTGAT TTAAGGGAATGCGATGGAATAGTGATACCTGGAGGAGAATCAACAACATTGAGAAAATGC ATGTCATACGATAGTGACTCCTTATATAACGCCTTGAAAAATTATATCCATGTTAAAAAA AAACCTGTGTGGGGTACTTGTGCTGGGTGTATTTTACTATCAGAAAAAGTGGAAAAAACC AAGGATGATAATATTGAAAATGAATATGGAAATGAATTTTCCTTGGGAGGGTTGGATATA GAAATTACACGAAATTATTATGGATCGCAGAATGATAGCTTTATTTGCTCATTAGATATA AAATCTCAAGATCCTATTTTTAAAAAAAATATTAGAGCACCCTGTATAAGGGCACCATTT ATAAAAACAATATCATCAGACAAGGTTGTAACAATTGCAACATTTTCACATGAATCATTT GGAAAGAATATCATAGGAGCGGTGGAACAAGACAATTGTATGGGAACCGTTTTTCACCCA GAATTAATGCCATATACATGTTTTCATGAGTATTTTCTTGAAAAGGTTAAAAAACATATA AAGAATTCAGGAGAAGCATAA
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  • Fasta :-

    MEKITIGVLSLQGNFQSHINHFLQLQNPSLKVIEVRNKTDLRECDGIVIPGGESTTLRKC MSYDSDSLYNALKNYIHVKKKPVWGTCAGCILLSEKVEKTKDDNIENEYGNEFSLGGLDI EITRNYYGSQNDSFICSLDIKSQDPIFKKNIRAPCIRAPFIKTISSDKVVTIATFSHESF GKNIIGAVEQDNCMGTVFHPELMPYTCFHEYFLEKVKKHIKNSGEA

  • title: conserved cys residue
  • coordinates: C87
No Results
No Results
No Results
PY17X_0933800


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India