PY17X_0937700 | Josephin domain-containing protein, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_0937700OTHER0.9999580.0000020.000040
No Results

  • Fasta :-

    >PY17X_0937700 MCYYKIHKIETENGPINVYFEKQSKLYCLLHTTNNILQAHIYSPQDFREFENNFDYTKLN SNISDNDNNINENKNNKKSSDLNIKDKLNYENIFSYFKRGINYFGNFNIDVFYFFVSKHN IELHWVDNKEIYKKLNQNNNCLSLFSDSVLNDHKLIAFVINMVKINFLNIYNHRHFYTIR KISGMWFVLDSSRSKPILLPTSQDMNKHLINIVKDNNFTKHDNYIIQVFKNYEK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0937700.fa Sequence name : PY17X_0937700 Sequence length : 234 VALUES OF COMPUTED PARAMETERS Coef20 : 3.054 CoefTot : -0.779 ChDiff : 5 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.688 1.624 -0.089 0.593 MesoH : -0.879 0.165 -0.534 0.160 MuHd_075 : 14.589 9.611 4.535 2.499 MuHd_095 : 11.536 8.533 4.279 2.288 MuHd_100 : 4.814 9.266 2.619 1.515 MuHd_105 : 2.472 13.115 4.151 2.238 Hmax_075 : -2.800 2.188 -2.466 1.540 Hmax_095 : 0.200 6.125 -1.262 2.074 Hmax_100 : 0.200 5.500 -1.699 2.190 Hmax_105 : 6.767 13.067 2.736 4.632 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9887 0.0113 DFMC : 0.9914 0.0086
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 234 PY17X_0937700 MCYYKIHKIETENGPINVYFEKQSKLYCLLHTTNNILQAHIYSPQDFREFENNFDYTKLNSNISDNDNNINENKNNKKSS 80 DLNIKDKLNYENIFSYFKRGINYFGNFNIDVFYFFVSKHNIELHWVDNKEIYKKLNQNNNCLSLFSDSVLNDHKLIAFVI 160 NMVKINFLNIYNHRHFYTIRKISGMWFVLDSSRSKPILLPTSQDMNKHLINIVKDNNFTKHDNYIIQVFKNYEK 240 ................................................................................ 80 ................................................................................ 160 .......................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0937700 5 --MCYYK|IH 0.058 . PY17X_0937700 8 CYYKIHK|IE 0.058 . PY17X_0937700 22 INVYFEK|QS 0.058 . PY17X_0937700 25 YFEKQSK|LY 0.056 . PY17X_0937700 48 YSPQDFR|EF 0.091 . PY17X_0937700 58 NNFDYTK|LN 0.060 . PY17X_0937700 74 NNINENK|NN 0.061 . PY17X_0937700 77 NENKNNK|KS 0.064 . PY17X_0937700 78 ENKNNKK|SS 0.161 . PY17X_0937700 85 SSDLNIK|DK 0.071 . PY17X_0937700 87 DLNIKDK|LN 0.072 . PY17X_0937700 98 NIFSYFK|RG 0.055 . PY17X_0937700 99 IFSYFKR|GI 0.314 . PY17X_0937700 118 FYFFVSK|HN 0.057 . PY17X_0937700 129 LHWVDNK|EI 0.072 . PY17X_0937700 133 DNKEIYK|KL 0.065 . PY17X_0937700 134 NKEIYKK|LN 0.082 . PY17X_0937700 154 SVLNDHK|LI 0.064 . PY17X_0937700 164 FVINMVK|IN 0.057 . PY17X_0937700 174 LNIYNHR|HF 0.102 . PY17X_0937700 180 RHFYTIR|KI 0.106 . PY17X_0937700 181 HFYTIRK|IS 0.081 . PY17X_0937700 193 FVLDSSR|SK 0.103 . PY17X_0937700 195 LDSSRSK|PI 0.060 . PY17X_0937700 207 TSQDMNK|HL 0.075 . PY17X_0937700 214 HLINIVK|DN 0.075 . PY17X_0937700 220 KDNNFTK|HD 0.078 . PY17X_0937700 230 YIIQVFK|NY 0.069 . PY17X_0937700 234 VFKNYEK|-- 0.060 . ____________________________^_________________

  • Fasta :-

    >PY17X_0937700 ATGTGTTATTATAAAATACATAAAATTGAAACGGAAAATGGACCAATAAATGTATACTTT GAAAAACAAAGTAAATTATATTGCTTACTTCATACTACTAATAATATATTACAAGCACAT ATATATTCTCCTCAAGATTTTCGAGAATTTGAAAACAACTTTGATTACACAAAACTAAAT AGTAACATATCAGACAATGATAATAATATAAATGAAAACAAAAATAATAAAAAATCTAGT GACCTAAATATAAAAGACAAGTTGAACTATGAAAATATTTTTTCCTATTTTAAAAGAGGA ATTAATTATTTTGGAAATTTTAATATTGACGTTTTTTATTTTTTTGTAAGTAAACATAAT ATTGAATTACATTGGGTTGACAATAAAGAAATATATAAAAAATTAAATCAAAATAATAAT TGTCTTTCACTATTTAGTGATAGTGTTTTAAATGATCATAAATTAATTGCTTTTGTAATA AATATGGTTAAAATAAATTTTTTAAATATTTATAATCATAGACATTTTTACACAATAAGA AAAATTTCAGGCATGTGGTTTGTCTTGGATTCCTCGCGCAGTAAGCCCATTCTCTTGCCT ACTAGCCAGGATATGAACAAACATTTAATTAATATAGTAAAAGATAATAATTTCACTAAA CATGATAATTATATTATACAAGTTTTTAAAAATTATGAGAAATAA
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  • Fasta :-

    MCYYKIHKIETENGPINVYFEKQSKLYCLLHTTNNILQAHIYSPQDFREFENNFDYTKLN SNISDNDNNINENKNNKKSSDLNIKDKLNYENIFSYFKRGINYFGNFNIDVFYFFVSKHN IELHWVDNKEIYKKLNQNNNCLSLFSDSVLNDHKLIAFVINMVKINFLNIYNHRHFYTIR KISGMWFVLDSSRSKPILLPTSQDMNKHLINIVKDNNFTKHDNYIIQVFKNYEK

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PY17X_0937700


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India