PY17X_0947400 | fam-a protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PY17X_0947400OTHER0.9999590.0000280.000013
No Results

  • Fasta :-

    >PY17X_0947400 MGGYWIENFNQNGYSVYALNLQGHGESQSFGNLRSNFDCYNDLVDDVIQYMNQIQDEISN DNQTGYEFHNIKEKEDNINAREENDNNMVEYIVNDMDNSNYHAIEDMNNTHLIVNSNDYG SNSSCASTSDTANASTSDKDEGCYNYLDILKVAYLYLSEYFAKIYKHDKFLNDKGRKFKC ISELIKATITLNSNVKKKELHSVDGMNHSTPKKPENKDILKKILNEFLI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_0947400.fa Sequence name : PY17X_0947400 Sequence length : 229 VALUES OF COMPUTED PARAMETERS Coef20 : 3.082 CoefTot : -2.542 ChDiff : -14 ZoneTo : 25 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.206 0.806 -0.149 0.415 MesoH : -1.409 -0.353 -0.615 0.023 MuHd_075 : 17.650 9.092 4.889 3.325 MuHd_095 : 21.517 13.326 5.368 5.351 MuHd_100 : 20.830 14.928 5.745 5.031 MuHd_105 : 23.562 19.871 6.606 5.641 Hmax_075 : 12.017 4.500 1.459 4.730 Hmax_095 : 14.000 9.100 0.528 5.574 Hmax_100 : 12.600 8.500 1.178 5.730 Hmax_105 : 7.600 6.800 0.611 4.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9825 0.0175 DFMC : 0.9953 0.0047
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 229 PY17X_0947400 MGGYWIENFNQNGYSVYALNLQGHGESQSFGNLRSNFDCYNDLVDDVIQYMNQIQDEISNDNQTGYEFHNIKEKEDNINA 80 REENDNNMVEYIVNDMDNSNYHAIEDMNNTHLIVNSNDYGSNSSCASTSDTANASTSDKDEGCYNYLDILKVAYLYLSEY 160 FAKIYKHDKFLNDKGRKFKCISELIKATITLNSNVKKKELHSVDGMNHSTPKKPENKDILKKILNEFLI 240 ................................................................................ 80 ................................................................................ 160 ..................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_0947400 34 QSFGNLR|SN 0.145 . PY17X_0947400 72 YEFHNIK|EK 0.068 . PY17X_0947400 74 FHNIKEK|ED 0.065 . PY17X_0947400 81 EDNINAR|EE 0.112 . PY17X_0947400 139 NASTSDK|DE 0.079 . PY17X_0947400 151 NYLDILK|VA 0.056 . PY17X_0947400 163 LSEYFAK|IY 0.065 . PY17X_0947400 166 YFAKIYK|HD 0.055 . PY17X_0947400 169 KIYKHDK|FL 0.086 . PY17X_0947400 174 DKFLNDK|GR 0.055 . PY17X_0947400 176 FLNDKGR|KF 0.097 . PY17X_0947400 177 LNDKGRK|FK 0.097 . PY17X_0947400 179 DKGRKFK|CI 0.237 . PY17X_0947400 186 CISELIK|AT 0.070 . PY17X_0947400 196 TLNSNVK|KK 0.062 . PY17X_0947400 197 LNSNVKK|KE 0.145 . PY17X_0947400 198 NSNVKKK|EL 0.194 . PY17X_0947400 212 MNHSTPK|KP 0.068 . PY17X_0947400 213 NHSTPKK|PE 0.093 . PY17X_0947400 217 PKKPENK|DI 0.081 . PY17X_0947400 221 ENKDILK|KI 0.058 . PY17X_0947400 222 NKDILKK|IL 0.096 . ____________________________^_________________

  • Fasta :-

    >PY17X_0947400 ATGGGTGGCTATTGGATTGAAAATTTTAATCAAAATGGCTATTCAGTATATGCACTAAAT TTGCAAGGACATGGTGAATCACAATCATTTGGAAATTTAAGAAGCAATTTTGATTGCTAT AATGATCTAGTTGACGATGTAATACAATATATGAATCAAATTCAAGATGAAATCTCAAAT GATAATCAAACGGGTTATGAATTTCATAATATAAAAGAAAAAGAAGATAACATTAATGCT AGAGAGGAAAATGATAATAATATGGTAGAATATATTGTTAATGATATGGATAATTCTAAT TATCATGCTATAGAAGATATGAATAATACGCATTTAATTGTCAATTCTAATGATTATGGT TCCAATAGTTCATGTGCTAGTACCTCTGATACGGCAAATGCTAGTACTAGTGATAAAGAT GAAGGGTGCTATAATTATTTAGATATATTAAAGGTTGCGTATCTTTATTTGTCCGAATAT TTTGCTAAAATATATAAACATGATAAATTTCTAAATGATAAAGGAAGAAAATTTAAATGT ATTTCTGAGCTTATAAAAGCAACGATCACATTGAATTCAAATGTTAAGAAAAAAGAATTA CATAGTGTTGATGGTATGAACCATTCTACACCGAAAAAGCCAGAAAATAAAGATATTTTA AAAAAAATATTGAATGAATTTCTAATTTAA
  • Download Fasta

  • Fasta :-

    MGGYWIENFNQNGYSVYALNLQGHGESQSFGNLRSNFDCYNDLVDDVIQYMNQIQDEISN DNQTGYEFHNIKEKEDNINAREENDNNMVEYIVNDMDNSNYHAIEDMNNTHLIVNSNDYG SNSSCASTSDTANASTSDKDEGCYNYLDILKVAYLYLSEYFAKIYKHDKFLNDKGRKFKC ISELIKATITLNSNVKKKELHSVDGMNHSTPKKPENKDILKKILNEFLI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_0947400137 SNASTSDKDE0.998unspPY17X_0947400137 SNASTSDKDE0.998unspPY17X_0947400137 SNASTSDKDE0.998unspPY17X_0947400127 SSSCASTSDT0.993unspPY17X_0947400135 STANASTSDK0.994unsp
PY17X_0947400


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India