PY17X_1001000 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PY17X_1001000OTHER0.9999860.0000080.000005
No Results

  • Fasta :-

    >PY17X_1001000 MEEIEMNNDELKNTKCNLDGDPKIGWLCNKNGLLLKTYGWLVENSVGIILLIHGFKVHTR STFMRKKLKIANRNESLVVDTHNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWNNVK GDFSCFDDLVDDVIQYMNQIQDEISNDNQKDDGSHDIVTHKKEKLPMYIIGYSMGGNIAL RILQLLKKEQEDRINSEDANDNKKCNIMLENSTNINEIDNDMNNSNDYDSDNSCANISAT KNSITSDKHESCYNYLDKLNIKGCVSLSGMIRIKSILDPGNKSFKYFYLPLVNFLSYVLP HAEFSSESRYKKSGYFPNICKCYKFLNIDGRKYKYKSEFIKATVTLDCNINYMPTDIPLL FVHSTDDSICCYKWTASFYNKINVSKKELHTVDDMNHFTTTMPGNENILNKIIDWISNLR KDDKDEKENEL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1001000.fa Sequence name : PY17X_1001000 Sequence length : 431 VALUES OF COMPUTED PARAMETERS Coef20 : 2.807 CoefTot : 0.000 ChDiff : -10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.947 1.447 0.031 0.650 MesoH : -0.903 -0.003 -0.463 0.115 MuHd_075 : 12.886 9.559 4.376 2.280 MuHd_095 : 14.257 11.568 4.383 2.512 MuHd_100 : 22.072 15.316 5.028 4.072 MuHd_105 : 25.910 14.796 5.198 4.664 Hmax_075 : -13.125 -3.383 -5.563 0.082 Hmax_095 : -11.100 1.400 -4.444 0.530 Hmax_100 : -6.300 3.100 -4.619 1.290 Hmax_105 : 3.700 6.300 -1.706 2.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9933 0.0067 DFMC : 0.9948 0.0052
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 431 PY17X_1001000 MEEIEMNNDELKNTKCNLDGDPKIGWLCNKNGLLLKTYGWLVENSVGIILLIHGFKVHTRSTFMRKKLKIANRNESLVVD 80 THNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWNNVKGDFSCFDDLVDDVIQYMNQIQDEISNDNQKDDGSHDIVTH 160 KKEKLPMYIIGYSMGGNIALRILQLLKKEQEDRINSEDANDNKKCNIMLENSTNINEIDNDMNNSNDYDSDNSCANISAT 240 KNSITSDKHESCYNYLDKLNIKGCVSLSGMIRIKSILDPGNKSFKYFYLPLVNFLSYVLPHAEFSSESRYKKSGYFPNIC 320 KCYKFLNIDGRKYKYKSEFIKATVTLDCNINYMPTDIPLLFVHSTDDSICCYKWTASFYNKINVSKKELHTVDDMNHFTT 400 TMPGNENILNKIIDWISNLRKDDKDEKENEL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1001000 12 MNNDELK|NT 0.071 . PY17X_1001000 15 DELKNTK|CN 0.061 . PY17X_1001000 23 NLDGDPK|IG 0.055 . PY17X_1001000 30 IGWLCNK|NG 0.053 . PY17X_1001000 36 KNGLLLK|TY 0.066 . PY17X_1001000 56 LLIHGFK|VH 0.060 . PY17X_1001000 60 GFKVHTR|ST 0.134 . PY17X_1001000 65 TRSTFMR|KK 0.151 . PY17X_1001000 66 RSTFMRK|KL 0.090 . PY17X_1001000 67 STFMRKK|LK 0.098 . PY17X_1001000 69 FMRKKLK|IA 0.079 . PY17X_1001000 73 KLKIANR|NE 0.111 . PY17X_1001000 88 HNYYIYK|DS 0.076 . PY17X_1001000 94 KDSWIEK|FN 0.080 . PY17X_1001000 120 QAWNNVK|GD 0.073 . PY17X_1001000 150 ISNDNQK|DD 0.079 . PY17X_1001000 161 HDIVTHK|KE 0.056 . PY17X_1001000 162 DIVTHKK|EK 0.087 . PY17X_1001000 164 VTHKKEK|LP 0.065 . PY17X_1001000 181 GGNIALR|IL 0.076 . PY17X_1001000 187 RILQLLK|KE 0.053 . PY17X_1001000 188 ILQLLKK|EQ 0.104 . PY17X_1001000 193 KKEQEDR|IN 0.087 . PY17X_1001000 203 EDANDNK|KC 0.067 . PY17X_1001000 204 DANDNKK|CN 0.102 . PY17X_1001000 241 ANISATK|NS 0.064 . PY17X_1001000 248 NSITSDK|HE 0.065 . PY17X_1001000 258 CYNYLDK|LN 0.068 . PY17X_1001000 262 LDKLNIK|GC 0.059 . PY17X_1001000 272 SLSGMIR|IK 0.107 . PY17X_1001000 274 SGMIRIK|SI 0.087 . PY17X_1001000 282 ILDPGNK|SF 0.058 . PY17X_1001000 285 PGNKSFK|YF 0.069 . PY17X_1001000 309 EFSSESR|YK 0.097 . PY17X_1001000 311 SSESRYK|KS 0.073 . PY17X_1001000 312 SESRYKK|SG 0.408 . PY17X_1001000 321 YFPNICK|CY 0.053 . PY17X_1001000 324 NICKCYK|FL 0.070 . PY17X_1001000 331 FLNIDGR|KY 0.085 . PY17X_1001000 332 LNIDGRK|YK 0.099 . PY17X_1001000 334 IDGRKYK|YK 0.230 . PY17X_1001000 336 GRKYKYK|SE 0.117 . PY17X_1001000 341 YKSEFIK|AT 0.078 . PY17X_1001000 373 DSICCYK|WT 0.061 . PY17X_1001000 381 TASFYNK|IN 0.066 . PY17X_1001000 386 NKINVSK|KE 0.062 . PY17X_1001000 387 KINVSKK|EL 0.195 . PY17X_1001000 411 NENILNK|II 0.077 . PY17X_1001000 420 DWISNLR|KD 0.075 . PY17X_1001000 421 WISNLRK|DD 0.113 . PY17X_1001000 424 NLRKDDK|DE 0.072 . PY17X_1001000 427 KDDKDEK|EN 0.061 . ____________________________^_________________

  • Fasta :-

    >PY17X_1001000 ATGGAAGAAATTGAAATGAATAATGATGAATTAAAAAATACAAAATGTAATTTAGATGGC GATCCTAAGATAGGTTGGTTATGTAATAAAAATGGTTTACTTTTAAAAACATATGGATGG CTAGTTGAAAATTCTGTAGGAATTATATTGTTAATACATGGATTCAAAGTTCATACTCGA TCAACTTTTATGAGAAAGAAATTAAAAATAGCAAATAGAAATGAAAGCTTAGTAGTAGAC ACTCATAATTACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAATGGTTAT TCAGTATATGCATTAGATTTACAAGGGCATGGTGAATCACAAGCATGGAATAATGTAAAA GGTGATTTTAGTTGTTTTGATGATTTAGTTGATGATGTAATACAATATATGAATCAGATT CAAGATGAAATCTCAAATGATAACCAAAAGGATGATGGATCTCATGATATAGTAACACAT AAAAAAGAAAAACTTCCTATGTATATTATAGGGTATTCGATGGGAGGAAATATTGCTTTA AGAATATTACAGTTATTAAAGAAAGAGCAAGAAGATAGAATTAATTCTGAAGATGCAAAT GACAATAAAAAATGTAACATTATGTTAGAAAATTCTACTAATATTAATGAAATTGACAAT GATATGAACAATTCTAATGATTATGATTCCGATAATTCCTGTGCTAATATCTCTGCTACG AAAAATTCTATTACTAGTGATAAACATGAAAGCTGCTATAATTATTTAGATAAATTAAAT ATTAAAGGTTGCGTATCTTTATCTGGTATGATAAGAATAAAATCAATATTGGATCCTGGA AACAAATCATTTAAGTATTTTTATTTACCACTAGTAAACTTCCTGTCTTATGTCTTGCCT CATGCAGAATTTTCATCAGAATCACGTTATAAAAAATCCGGATATTTTCCTAATATATGT AAATGTTATAAATTTCTAAATATTGATGGAAGAAAATATAAATATAAGTCTGAATTTATA AAAGCAACGGTTACATTGGATTGTAATATTAATTATATGCCAACAGATATTCCTTTATTA TTTGTGCATTCAACAGATGATAGTATTTGTTGTTATAAATGGACGGCTTCATTTTATAAT AAAATAAATGTTAGTAAAAAAGAATTACATACCGTTGATGATATGAATCATTTTACAACG ACAATGCCAGGAAATGAAAACATTTTAAACAAAATTATTGATTGGATTTCTAATTTAAGA AAGGATGATAAAGATGAAAAGGAAAATGAACTATAA
  • Download Fasta

  • Fasta :-

    MEEIEMNNDELKNTKCNLDGDPKIGWLCNKNGLLLKTYGWLVENSVGIILLIHGFKVHTR STFMRKKLKIANRNESLVVDTHNYYIYKDSWIEKFNQNGYSVYALDLQGHGESQAWNNVK GDFSCFDDLVDDVIQYMNQIQDEISNDNQKDDGSHDIVTHKKEKLPMYIIGYSMGGNIAL RILQLLKKEQEDRINSEDANDNKKCNIMLENSTNINEIDNDMNNSNDYDSDNSCANISAT KNSITSDKHESCYNYLDKLNIKGCVSLSGMIRIKSILDPGNKSFKYFYLPLVNFLSYVLP HAEFSSESRYKKSGYFPNICKCYKFLNIDGRKYKYKSEFIKATVTLDCNINYMPTDIPLL FVHSTDDSICCYKWTASFYNKINVSKKELHTVDDMNHFTTTMPGNENILNKIIDWISNLR KDDKDEKENEL

    No Results
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PY17X_1001000


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India