PY17X_1002500 | ubiquitin specific protease, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1002500OTHER0.9999830.0000080.000009
No Results

  • Fasta :-

    >PY17X_1002500 MNISYHNFIDTFNIKNYEYYEKYYNYEDSKRNHTAFINNGNICYCNASLQLILSIKPLCI YILKNFDKFYLKTQSKYKGDIIKTMYELIHETYNIGETKNNNILCTNKHINLLKKINKYN LHLDIFSQNDAHEFMLLLLNYINIECNRYTDNEKNMEIILDENDDKELAGDKYWVKYLYK ENSIITDLLGFQNISTITCFNCDHTRYSFEFCLDLGLEFPDENIKSTTLIELLKNNINKS DDICSLDCNNCKLKKTSRIKKGIYRMPNLYMIIYIKRFKWVYYQSNNCYNNKVKKIDTIV LLPQDGIVDFTNFLQLSNHNSLYNAKYIIESIICHSGNSYNGHYTSIVKHYDGFYKCNDD KMYKLDTPYDPNNISDIYLLLLRRLS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1002500.fa Sequence name : PY17X_1002500 Sequence length : 386 VALUES OF COMPUTED PARAMETERS Coef20 : 3.240 CoefTot : -0.552 ChDiff : 1 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.729 0.187 0.569 MesoH : -0.999 -0.020 -0.507 0.129 MuHd_075 : 14.494 16.033 6.519 4.689 MuHd_095 : 23.351 8.886 5.338 2.694 MuHd_100 : 15.657 6.401 3.044 1.394 MuHd_105 : 9.447 4.864 2.382 0.960 Hmax_075 : 0.600 8.500 -1.209 3.700 Hmax_095 : 9.000 6.400 -0.532 3.740 Hmax_100 : 3.600 3.700 -2.401 3.140 Hmax_105 : -0.400 3.300 -2.937 2.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9908 0.0092 DFMC : 0.9938 0.0062
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 386 PY17X_1002500 MNISYHNFIDTFNIKNYEYYEKYYNYEDSKRNHTAFINNGNICYCNASLQLILSIKPLCIYILKNFDKFYLKTQSKYKGD 80 IIKTMYELIHETYNIGETKNNNILCTNKHINLLKKINKYNLHLDIFSQNDAHEFMLLLLNYINIECNRYTDNEKNMEIIL 160 DENDDKELAGDKYWVKYLYKENSIITDLLGFQNISTITCFNCDHTRYSFEFCLDLGLEFPDENIKSTTLIELLKNNINKS 240 DDICSLDCNNCKLKKTSRIKKGIYRMPNLYMIIYIKRFKWVYYQSNNCYNNKVKKIDTIVLLPQDGIVDFTNFLQLSNHN 320 SLYNAKYIIESIICHSGNSYNGHYTSIVKHYDGFYKCNDDKMYKLDTPYDPNNISDIYLLLLRRLS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1002500 15 IDTFNIK|NY 0.067 . PY17X_1002500 22 NYEYYEK|YY 0.060 . PY17X_1002500 30 YNYEDSK|RN 0.062 . PY17X_1002500 31 NYEDSKR|NH 0.138 . PY17X_1002500 56 QLILSIK|PL 0.062 . PY17X_1002500 64 LCIYILK|NF 0.057 . PY17X_1002500 68 ILKNFDK|FY 0.070 . PY17X_1002500 72 FDKFYLK|TQ 0.061 . PY17X_1002500 76 YLKTQSK|YK 0.104 . PY17X_1002500 78 KTQSKYK|GD 0.074 . PY17X_1002500 83 YKGDIIK|TM 0.064 . PY17X_1002500 99 YNIGETK|NN 0.062 . PY17X_1002500 108 NILCTNK|HI 0.058 . PY17X_1002500 114 KHINLLK|KI 0.070 . PY17X_1002500 115 HINLLKK|IN 0.107 . PY17X_1002500 118 LLKKINK|YN 0.061 . PY17X_1002500 148 INIECNR|YT 0.113 . PY17X_1002500 154 RYTDNEK|NM 0.063 . PY17X_1002500 166 LDENDDK|EL 0.060 . PY17X_1002500 172 KELAGDK|YW 0.059 . PY17X_1002500 176 GDKYWVK|YL 0.073 . PY17X_1002500 180 WVKYLYK|EN 0.067 . PY17X_1002500 206 FNCDHTR|YS 0.090 . PY17X_1002500 225 FPDENIK|ST 0.071 . PY17X_1002500 234 TLIELLK|NN 0.060 . PY17X_1002500 239 LKNNINK|SD 0.090 . PY17X_1002500 252 LDCNNCK|LK 0.060 . PY17X_1002500 254 CNNCKLK|KT 0.084 . PY17X_1002500 255 NNCKLKK|TS 0.093 . PY17X_1002500 258 KLKKTSR|IK 0.099 . PY17X_1002500 260 KKTSRIK|KG 0.058 . PY17X_1002500 261 KTSRIKK|GI 0.456 . PY17X_1002500 265 IKKGIYR|MP 0.080 . PY17X_1002500 276 YMIIYIK|RF 0.058 . PY17X_1002500 277 MIIYIKR|FK 0.179 . PY17X_1002500 279 IYIKRFK|WV 0.075 . PY17X_1002500 292 NNCYNNK|VK 0.057 . PY17X_1002500 294 CYNNKVK|KI 0.079 . PY17X_1002500 295 YNNKVKK|ID 0.136 . PY17X_1002500 326 NSLYNAK|YI 0.076 . PY17X_1002500 349 HYTSIVK|HY 0.058 . PY17X_1002500 356 HYDGFYK|CN 0.068 . PY17X_1002500 361 YKCNDDK|MY 0.058 . PY17X_1002500 364 NDDKMYK|LD 0.058 . PY17X_1002500 383 IYLLLLR|RL 0.071 . PY17X_1002500 384 YLLLLRR|LS 0.087 . ____________________________^_________________

  • Fasta :-

    >PY17X_1002500 ATGAATATATCATATCACAACTTTATCGATACATTTAACATAAAAAACTACGAGTATTAT GAAAAGTATTACAACTATGAAGATTCCAAAAGAAATCACACAGCATTTATAAATAATGGA AATATATGTTATTGCAATGCTTCACTACAACTAATATTGTCAATTAAACCTCTTTGCATA TATATACTAAAAAATTTCGACAAATTTTACCTCAAGACTCAATCTAAATATAAAGGAGAT ATAATTAAAACAATGTATGAATTGATTCACGAAACTTATAATATTGGAGAAACAAAGAAC AACAATATATTATGTACAAATAAACACATAAATTTACTTAAAAAAATTAACAAATATAAT TTACATTTGGATATTTTTTCACAAAATGATGCTCATGAATTTATGCTATTATTACTAAAT TATATTAATATAGAATGTAATAGATATACAGATAATGAAAAAAATATGGAAATAATATTG GACGAAAACGATGACAAAGAATTGGCAGGAGATAAATATTGGGTAAAATATCTATATAAA GAAAATAGTATAATAACTGATTTACTAGGCTTTCAAAATATTTCTACTATTACCTGTTTT AATTGTGATCATACACGATACAGTTTTGAATTCTGCTTAGATTTGGGATTAGAATTTCCT GATGAAAATATAAAAAGTACTACACTTATAGAATTACTTAAAAACAATATAAATAAAAGT GACGATATTTGTTCATTAGATTGTAATAATTGTAAACTAAAAAAAACAAGTCGAATAAAA AAAGGGATATATAGAATGCCTAATTTATATATGATAATATATATAAAAAGATTTAAATGG GTATATTACCAAAGTAATAACTGTTATAATAACAAAGTTAAAAAAATAGATACAATTGTA TTACTACCCCAAGATGGTATCGTCGATTTTACAAATTTTTTACAACTCTCTAATCATAAT TCTTTATATAACGCCAAATATATTATTGAAAGTATTATATGCCATAGTGGAAATAGTTAT AATGGCCATTACACATCTATAGTTAAGCATTACGATGGATTTTACAAATGCAACGACGAT AAAATGTATAAATTAGATACGCCATATGATCCTAACAATATCAGTGACATATATTTGCTT TTGCTAAGGAGATTATCCTAG
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  • Fasta :-

    MNISYHNFIDTFNIKNYEYYEKYYNYEDSKRNHTAFINNGNICYCNASLQLILSIKPLCI YILKNFDKFYLKTQSKYKGDIIKTMYELIHETYNIGETKNNNILCTNKHINLLKKINKYN LHLDIFSQNDAHEFMLLLLNYINIECNRYTDNEKNMEIILDENDDKELAGDKYWVKYLYK ENSIITDLLGFQNISTITCFNCDHTRYSFEFCLDLGLEFPDENIKSTTLIELLKNNINKS DDICSLDCNNCKLKKTSRIKKGIYRMPNLYMIIYIKRFKWVYYQSNNCYNNKVKKIDTIV LLPQDGIVDFTNFLQLSNHNSLYNAKYIIESIICHSGNSYNGHYTSIVKHYDGFYKCNDD KMYKLDTPYDPNNISDIYLLLLRRLS

    No Results
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PY17X_1002500


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India