PY17X_1007900 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

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_IDPredictionOTHERSPmTPCS_Position
PY17X_1007900SP0.0322930.9675590.000148CS pos: 23-24. FNS-YK. Pr: 0.4841
No Results

  • Fasta :-

    >PY17X_1007900 MKLRASTCIVFFLLFFIPCLFNSYKIDSIKIKNLYFSDTLKGTVNKINKQFKNNYDDYDV CKYNKIPKILIDRDKIKKNNKESGYIVGIENTCDDTCVCIIDLQLRIIKNFIISHFKVVH KYGGVYPFFISSINSVFLKHYVNKILEGIDASKIKCFGFSVCPGISQNMDTARNYIGDFK KRHKHIKASSINHVYAHVLSPLFFSFYNDKNTFTNNYEYKNESTQKDDHTDHINMNLFDT IKKDKIQMDKINSLLKVLNNNDVTKTKLKMITADDFLNYGSYVLKKKKIDDNNIQLDETK NNINQIKENTNMEKIPLNYIQNGYICVLVSGGSTQVYRVQKDKQNDINVCKISQTVDISV GDIIDKVARLLNLPVGLGGGPFLERESEKYIKTLNDQKINEDISFDLFEPFPVPFAPNNK INFSFSGIFNHLSKIIKELKKEKNFENEKSKYAYYCQKYIFKHLLNQLNKIMYCSELHFN IKNLFIVGGVGCNKFLFESLKKLALNRNKIENQLKEYIKLKKRLKKKIKKIENNNFLTKK NPPTNNMINEIELSSSFAWNFYLKNLLKKKTSNDILLALKAFDFNSFTKLKEKGSFLLQD QFLTSSITQPWNVYRTPINLSRDNAAMICFNTLLNMHNKINIHEDISEIKIKSTIKTQLQ NNFLLLSDIIVFDVFLDYFDHNVA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1007900.fa Sequence name : PY17X_1007900 Sequence length : 684 VALUES OF COMPUTED PARAMETERS Coef20 : 4.977 CoefTot : 0.218 ChDiff : 32 ZoneTo : 26 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.524 2.488 0.582 0.841 MesoH : -0.345 0.648 -0.282 0.289 MuHd_075 : 19.767 9.540 3.379 4.191 MuHd_095 : 16.119 16.208 6.393 5.103 MuHd_100 : 16.281 14.810 6.090 5.008 MuHd_105 : 17.988 17.020 6.721 4.782 Hmax_075 : 22.283 22.867 4.785 7.175 Hmax_095 : 19.425 23.450 5.201 8.068 Hmax_100 : 19.800 22.800 5.941 7.120 Hmax_105 : 20.767 22.800 4.217 7.193 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6586 0.3414 DFMC : 0.6772 0.3228
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 684 PY17X_1007900 MKLRASTCIVFFLLFFIPCLFNSYKIDSIKIKNLYFSDTLKGTVNKINKQFKNNYDDYDVCKYNKIPKILIDRDKIKKNN 80 KESGYIVGIENTCDDTCVCIIDLQLRIIKNFIISHFKVVHKYGGVYPFFISSINSVFLKHYVNKILEGIDASKIKCFGFS 160 VCPGISQNMDTARNYIGDFKKRHKHIKASSINHVYAHVLSPLFFSFYNDKNTFTNNYEYKNESTQKDDHTDHINMNLFDT 240 IKKDKIQMDKINSLLKVLNNNDVTKTKLKMITADDFLNYGSYVLKKKKIDDNNIQLDETKNNINQIKENTNMEKIPLNYI 320 QNGYICVLVSGGSTQVYRVQKDKQNDINVCKISQTVDISVGDIIDKVARLLNLPVGLGGGPFLERESEKYIKTLNDQKIN 400 EDISFDLFEPFPVPFAPNNKINFSFSGIFNHLSKIIKELKKEKNFENEKSKYAYYCQKYIFKHLLNQLNKIMYCSELHFN 480 IKNLFIVGGVGCNKFLFESLKKLALNRNKIENQLKEYIKLKKRLKKKIKKIENNNFLTKKNPPTNNMINEIELSSSFAWN 560 FYLKNLLKKKTSNDILLALKAFDFNSFTKLKEKGSFLLQDQFLTSSITQPWNVYRTPINLSRDNAAMICFNTLLNMHNKI 640 NIHEDISEIKIKSTIKTQLQNNFLLLSDIIVFDVFLDYFDHNVA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1007900 2 -----MK|LR 0.054 . PY17X_1007900 4 ---MKLR|AS 0.102 . PY17X_1007900 25 CLFNSYK|ID 0.073 . PY17X_1007900 30 YKIDSIK|IK 0.063 . PY17X_1007900 32 IDSIKIK|NL 0.077 . PY17X_1007900 41 YFSDTLK|GT 0.067 . PY17X_1007900 46 LKGTVNK|IN 0.066 . PY17X_1007900 49 TVNKINK|QF 0.066 . PY17X_1007900 52 KINKQFK|NN 0.075 . PY17X_1007900 62 DDYDVCK|YN 0.064 . PY17X_1007900 65 DVCKYNK|IP 0.054 . PY17X_1007900 68 KYNKIPK|IL 0.068 . PY17X_1007900 73 PKILIDR|DK 0.095 . PY17X_1007900 75 ILIDRDK|IK 0.061 . PY17X_1007900 77 IDRDKIK|KN 0.072 . PY17X_1007900 78 DRDKIKK|NN 0.098 . PY17X_1007900 81 KIKKNNK|ES 0.072 . PY17X_1007900 106 IIDLQLR|II 0.081 . PY17X_1007900 109 LQLRIIK|NF 0.094 . PY17X_1007900 117 FIISHFK|VV 0.079 . PY17X_1007900 121 HFKVVHK|YG 0.078 . PY17X_1007900 139 INSVFLK|HY 0.076 . PY17X_1007900 144 LKHYVNK|IL 0.095 . PY17X_1007900 153 EGIDASK|IK 0.059 . PY17X_1007900 155 IDASKIK|CF 0.078 . PY17X_1007900 173 QNMDTAR|NY 0.105 . PY17X_1007900 180 NYIGDFK|KR 0.060 . PY17X_1007900 181 YIGDFKK|RH 0.090 . PY17X_1007900 182 IGDFKKR|HK 0.236 . PY17X_1007900 184 DFKKRHK|HI 0.067 . PY17X_1007900 187 KRHKHIK|AS 0.109 . PY17X_1007900 210 FSFYNDK|NT 0.064 . PY17X_1007900 220 TNNYEYK|NE 0.089 . PY17X_1007900 226 KNESTQK|DD 0.074 . PY17X_1007900 242 NLFDTIK|KD 0.059 . PY17X_1007900 243 LFDTIKK|DK 0.100 . PY17X_1007900 245 DTIKKDK|IQ 0.071 . PY17X_1007900 250 DKIQMDK|IN 0.059 . PY17X_1007900 256 KINSLLK|VL 0.061 . PY17X_1007900 265 NNNDVTK|TK 0.071 . PY17X_1007900 267 NDVTKTK|LK 0.065 . PY17X_1007900 269 VTKTKLK|MI 0.066 . PY17X_1007900 285 YGSYVLK|KK 0.064 . PY17X_1007900 286 GSYVLKK|KK 0.108 . PY17X_1007900 287 SYVLKKK|KI 0.128 . PY17X_1007900 288 YVLKKKK|ID 0.088 . PY17X_1007900 300 IQLDETK|NN 0.061 . PY17X_1007900 307 NNINQIK|EN 0.075 . PY17X_1007900 314 ENTNMEK|IP 0.059 . PY17X_1007900 338 GSTQVYR|VQ 0.105 . PY17X_1007900 341 QVYRVQK|DK 0.145 . PY17X_1007900 343 YRVQKDK|QN 0.079 . PY17X_1007900 351 NDINVCK|IS 0.068 . PY17X_1007900 366 VGDIIDK|VA 0.055 . PY17X_1007900 369 IIDKVAR|LL 0.077 . PY17X_1007900 385 GGPFLER|ES 0.105 . PY17X_1007900 389 LERESEK|YI 0.086 . PY17X_1007900 392 ESEKYIK|TL 0.067 . PY17X_1007900 398 KTLNDQK|IN 0.061 . PY17X_1007900 420 PFAPNNK|IN 0.057 . PY17X_1007900 434 IFNHLSK|II 0.066 . PY17X_1007900 437 HLSKIIK|EL 0.073 . PY17X_1007900 440 KIIKELK|KE 0.058 . PY17X_1007900 441 IIKELKK|EK 0.080 . PY17X_1007900 443 KELKKEK|NF 0.063 . PY17X_1007900 449 KNFENEK|SK 0.074 . PY17X_1007900 451 FENEKSK|YA 0.093 . PY17X_1007900 458 YAYYCQK|YI 0.081 . PY17X_1007900 462 CQKYIFK|HL 0.066 . PY17X_1007900 470 LLNQLNK|IM 0.071 . PY17X_1007900 482 ELHFNIK|NL 0.075 . PY17X_1007900 494 GGVGCNK|FL 0.070 . PY17X_1007900 501 FLFESLK|KL 0.060 . PY17X_1007900 502 LFESLKK|LA 0.077 . PY17X_1007900 507 KKLALNR|NK 0.076 . PY17X_1007900 509 LALNRNK|IE 0.059 . PY17X_1007900 515 KIENQLK|EY 0.061 . PY17X_1007900 519 QLKEYIK|LK 0.057 . PY17X_1007900 521 KEYIKLK|KR 0.058 . PY17X_1007900 522 EYIKLKK|RL 0.094 . PY17X_1007900 523 YIKLKKR|LK 0.152 . PY17X_1007900 525 KLKKRLK|KK 0.064 . PY17X_1007900 526 LKKRLKK|KI 0.486 . PY17X_1007900 527 KKRLKKK|IK 0.126 . PY17X_1007900 529 RLKKKIK|KI 0.078 . PY17X_1007900 530 LKKKIKK|IE 0.094 . PY17X_1007900 539 NNNFLTK|KN 0.068 . PY17X_1007900 540 NNFLTKK|NP 0.084 . PY17X_1007900 564 AWNFYLK|NL 0.064 . PY17X_1007900 568 YLKNLLK|KK 0.056 . PY17X_1007900 569 LKNLLKK|KT 0.109 . PY17X_1007900 570 KNLLKKK|TS 0.111 . PY17X_1007900 580 DILLALK|AF 0.054 . PY17X_1007900 589 DFNSFTK|LK 0.068 . PY17X_1007900 591 NSFTKLK|EK 0.070 . PY17X_1007900 593 FTKLKEK|GS 0.068 . PY17X_1007900 615 QPWNVYR|TP 0.082 . PY17X_1007900 622 TPINLSR|DN 0.117 . PY17X_1007900 639 LLNMHNK|IN 0.075 . PY17X_1007900 650 EDISEIK|IK 0.070 . PY17X_1007900 652 ISEIKIK|ST 0.123 . PY17X_1007900 656 KIKSTIK|TQ 0.057 . ____________________________^_________________

  • Fasta :-

    >PY17X_1007900 ATGAAATTAAGAGCATCAACATGTATTGTTTTTTTTTTGTTGTTTTTTATTCCATGTTTA TTCAATTCATACAAAATAGATAGTATAAAAATTAAGAATTTATATTTTAGTGATACTTTA AAAGGAACAGTAAATAAAATTAACAAACAATTTAAAAATAACTATGATGATTATGATGTT TGTAAATACAACAAAATTCCCAAAATATTAATAGATAGAGATAAAATTAAAAAAAATAAT AAAGAATCAGGATATATTGTTGGAATAGAAAATACGTGTGATGATACATGTGTCTGTATA ATCGATTTGCAACTTCGAATAATCAAAAACTTTATCATATCCCATTTTAAAGTAGTTCAC AAATATGGAGGCGTATACCCCTTTTTTATTAGCTCCATTAATAGTGTGTTTTTAAAACAT TATGTGAACAAAATACTAGAAGGAATCGATGCATCAAAAATTAAATGCTTCGGATTCAGC GTGTGTCCTGGTATATCTCAGAACATGGACACAGCTAGAAATTATATAGGAGATTTCAAA AAAAGACATAAACATATAAAAGCTAGCTCAATAAATCATGTATATGCCCATGTTTTGTCA CCATTATTTTTCAGCTTTTATAACGACAAAAATACATTTACAAATAACTATGAGTATAAA AATGAAAGCACACAAAAAGATGACCACACAGATCATATTAATATGAATCTTTTTGATACT ATAAAAAAAGATAAAATACAAATGGATAAAATAAATTCGCTTTTAAAAGTTTTAAATAAT AACGATGTAACAAAAACAAAATTAAAAATGATAACTGCAGACGATTTTTTAAATTATGGT TCATATGTTTTAAAAAAAAAAAAAATTGATGATAATAATATTCAATTAGATGAAACAAAA AATAACATAAATCAAATAAAAGAAAATACTAATATGGAAAAAATACCATTAAATTATATA CAAAATGGATATATTTGTGTTTTAGTCTCTGGTGGAAGTACACAAGTTTATAGAGTCCAA AAGGATAAACAAAATGATATTAATGTGTGCAAAATATCGCAAACAGTTGACATATCTGTT GGTGATATAATTGATAAAGTTGCTAGGCTTCTTAATCTTCCTGTTGGTTTAGGAGGAGGA CCATTTCTTGAACGAGAATCCGAAAAATATATTAAAACATTGAACGACCAAAAAATTAAT GAAGACATATCATTCGATCTTTTTGAGCCGTTTCCCGTCCCATTCGCTCCTAATAATAAA ATTAATTTTTCATTTTCAGGAATTTTTAACCACCTTAGTAAAATAATAAAAGAGCTAAAA AAAGAAAAGAATTTCGAAAACGAAAAAAGTAAATATGCATATTATTGCCAAAAATATATA TTCAAACATTTGTTAAATCAGCTTAATAAAATTATGTATTGTTCAGAATTGCATTTTAAT ATAAAAAATTTATTCATAGTAGGAGGTGTTGGGTGTAATAAATTTTTGTTTGAGAGTTTA AAAAAATTGGCATTAAATAGAAATAAAATAGAAAACCAATTAAAAGAATATATTAAATTA AAAAAACGATTAAAAAAAAAAATAAAAAAAATTGAAAATAATAATTTTTTAACAAAAAAA AATCCACCGACAAATAATATGATCAATGAAATTGAATTAAGTTCGTCTTTTGCTTGGAAT TTTTATTTAAAAAATCTATTAAAAAAAAAAACATCAAATGATATTTTATTAGCTCTAAAA GCATTTGATTTTAATTCCTTTACAAAACTCAAAGAGAAAGGTTCCTTTTTATTACAGGAT CAATTTCTCACGTCGTCAATAACACAGCCGTGGAATGTGTATAGAACCCCCATAAATCTT AGCCGGGATAATGCAGCAATGATATGTTTTAACACATTGTTAAATATGCACAACAAAATA AACATACACGAAGATATTTCTGAGATTAAAATTAAGTCGACTATAAAAACCCAGCTTCAA AACAATTTCCTTCTTTTATCCGATATAATTGTTTTTGATGTATTTTTAGATTATTTTGAT CATAATGTAGCATAA
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  • Fasta :-

    MKLRASTCIVFFLLFFIPCLFNSYKIDSIKIKNLYFSDTLKGTVNKINKQFKNNYDDYDV CKYNKIPKILIDRDKIKKNNKESGYIVGIENTCDDTCVCIIDLQLRIIKNFIISHFKVVH KYGGVYPFFISSINSVFLKHYVNKILEGIDASKIKCFGFSVCPGISQNMDTARNYIGDFK KRHKHIKASSINHVYAHVLSPLFFSFYNDKNTFTNNYEYKNESTQKDDHTDHINMNLFDT IKKDKIQMDKINSLLKVLNNNDVTKTKLKMITADDFLNYGSYVLKKKKIDDNNIQLDETK NNINQIKENTNMEKIPLNYIQNGYICVLVSGGSTQVYRVQKDKQNDINVCKISQTVDISV GDIIDKVARLLNLPVGLGGGPFLERESEKYIKTLNDQKINEDISFDLFEPFPVPFAPNNK INFSFSGIFNHLSKIIKELKKEKNFENEKSKYAYYCQKYIFKHLLNQLNKIMYCSELHFN IKNLFIVGGVGCNKFLFESLKKLALNRNKIENQLKEYIKLKKRLKKKIKKIENNNFLTKK NPPTNNMINEIELSSSFAWNFYLKNLLKKKTSNDILLALKAFDFNSFTKLKEKGSFLLQD QFLTSSITQPWNVYRTPINLSRDNAAMICFNTLLNMHNKINIHEDISEIKIKSTIKTQLQ NNFLLLSDIIVFDVFLDYFDHNVA

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PY17X_1007900387 SLERESEKYI0.996unsp
PY17X_1007900


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India