PY17X_1033700 | rhomboid protease ROM8, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PY17X_1033700OTHER0.9999910.0000000.000009
No Results

  • Fasta :-

    >PY17X_1033700 MEKGNSCSNAKTFLESEDKTENINGSKEYDDDDNSLKKDICSNTSMDSNANENREAENQN SGENEIKNIKNHRPSTNSNGEITPSNEDNMLLSSNNTIILLKCVNNKSKDRNGSKNSSKS NYKKEKYKRSHTKKEKKFKVNSAGEDLLSDSRDYPSLKVNYKINKKNHYEKTKKMGYPQM TMNDKNERISSSICTDNARFINFLKENGKSAHYKNRKRYNNLWRQQKKNIQKKEESNSKT INNYILDIHDRNMSSANIGSNNIHKSKTSLKYYTHDEQGEQGYLSELQIAENERNIKDRN RLRNYSNTIKEENKIIKQKDKIKALLSRTRRCFLFRKKTLRKRKDKIIIFLNNNYTPPEN GKFNDHFYKTIHKDDLENLEEEKIYLHHNKGNTIKKIIYRIFPQFSIFSLILFVTFIQWV VFIILISVKSDFPLTPSNDSLKNFGSNFPYQIFKKAEVYRLFTALFLHSNFNHICANTYV QLTVGFLLEYLYGTYVVFLVYVFTGIYGIILSSPLTYCYSTTESSSSSSGIIGIFFSEIL MMTNFNVDTISISVHLFCFFLLLLFLKFSLNTISINIYSHFFGFIGGFLIGIILKRNQLK YFLKNNLLIQILSLIFLIVSLATAIFVSTSVMQDCPY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1033700.fa Sequence name : PY17X_1033700 Sequence length : 637 VALUES OF COMPUTED PARAMETERS Coef20 : 3.433 CoefTot : 0.000 ChDiff : 30 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.459 2.929 0.523 1.006 MesoH : 1.283 1.509 0.128 0.594 MuHd_075 : 10.216 5.432 1.555 2.758 MuHd_095 : 19.396 1.308 3.066 2.018 MuHd_100 : 9.093 5.883 0.578 0.857 MuHd_105 : 11.937 13.101 4.999 2.742 Hmax_075 : -5.367 -0.350 -3.733 1.073 Hmax_095 : 0.788 -4.375 -3.127 0.306 Hmax_100 : -6.200 2.700 -2.434 0.790 Hmax_105 : -6.300 4.083 -2.434 1.132 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9327 0.0673 DFMC : 0.9616 0.0384
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 637 PY17X_1033700 MEKGNSCSNAKTFLESEDKTENINGSKEYDDDDNSLKKDICSNTSMDSNANENREAENQNSGENEIKNIKNHRPSTNSNG 80 EITPSNEDNMLLSSNNTIILLKCVNNKSKDRNGSKNSSKSNYKKEKYKRSHTKKEKKFKVNSAGEDLLSDSRDYPSLKVN 160 YKINKKNHYEKTKKMGYPQMTMNDKNERISSSICTDNARFINFLKENGKSAHYKNRKRYNNLWRQQKKNIQKKEESNSKT 240 INNYILDIHDRNMSSANIGSNNIHKSKTSLKYYTHDEQGEQGYLSELQIAENERNIKDRNRLRNYSNTIKEENKIIKQKD 320 KIKALLSRTRRCFLFRKKTLRKRKDKIIIFLNNNYTPPENGKFNDHFYKTIHKDDLENLEEEKIYLHHNKGNTIKKIIYR 400 IFPQFSIFSLILFVTFIQWVVFIILISVKSDFPLTPSNDSLKNFGSNFPYQIFKKAEVYRLFTALFLHSNFNHICANTYV 480 QLTVGFLLEYLYGTYVVFLVYVFTGIYGIILSSPLTYCYSTTESSSSSSGIIGIFFSEILMMTNFNVDTISISVHLFCFF 560 LLLLFLKFSLNTISINIYSHFFGFIGGFLIGIILKRNQLKYFLKNNLLIQILSLIFLIVSLATAIFVSTSVMQDCPY 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................................................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1033700 3 ----MEK|GN 0.065 . PY17X_1033700 11 NSCSNAK|TF 0.064 . PY17X_1033700 19 FLESEDK|TE 0.055 . PY17X_1033700 27 ENINGSK|EY 0.062 . PY17X_1033700 37 DDDNSLK|KD 0.058 . PY17X_1033700 38 DDNSLKK|DI 0.135 . PY17X_1033700 54 SNANENR|EA 0.173 . PY17X_1033700 67 SGENEIK|NI 0.073 . PY17X_1033700 70 NEIKNIK|NH 0.059 . PY17X_1033700 73 KNIKNHR|PS 0.098 . PY17X_1033700 102 NTIILLK|CV 0.065 . PY17X_1033700 107 LKCVNNK|SK 0.091 . PY17X_1033700 109 CVNNKSK|DR 0.081 . PY17X_1033700 111 NNKSKDR|NG 0.084 . PY17X_1033700 115 KDRNGSK|NS 0.066 . PY17X_1033700 119 GSKNSSK|SN 0.118 . PY17X_1033700 123 SSKSNYK|KE 0.060 . PY17X_1033700 124 SKSNYKK|EK 0.144 . PY17X_1033700 126 SNYKKEK|YK 0.080 . PY17X_1033700 128 YKKEKYK|RS 0.074 . PY17X_1033700 129 KKEKYKR|SH 0.474 . PY17X_1033700 133 YKRSHTK|KE 0.070 . PY17X_1033700 134 KRSHTKK|EK 0.183 . PY17X_1033700 136 SHTKKEK|KF 0.062 . PY17X_1033700 137 HTKKEKK|FK 0.106 . PY17X_1033700 139 KKEKKFK|VN 0.108 . PY17X_1033700 152 DLLSDSR|DY 0.067 . PY17X_1033700 158 RDYPSLK|VN 0.062 . PY17X_1033700 162 SLKVNYK|IN 0.064 . PY17X_1033700 165 VNYKINK|KN 0.065 . PY17X_1033700 166 NYKINKK|NH 0.075 . PY17X_1033700 171 KKNHYEK|TK 0.089 . PY17X_1033700 173 NHYEKTK|KM 0.079 . PY17X_1033700 174 HYEKTKK|MG 0.109 . PY17X_1033700 185 QMTMNDK|NE 0.055 . PY17X_1033700 188 MNDKNER|IS 0.089 . PY17X_1033700 199 ICTDNAR|FI 0.090 . PY17X_1033700 205 RFINFLK|EN 0.071 . PY17X_1033700 209 FLKENGK|SA 0.088 . PY17X_1033700 214 GKSAHYK|NR 0.087 . PY17X_1033700 216 SAHYKNR|KR 0.112 . PY17X_1033700 217 AHYKNRK|RY 0.076 . PY17X_1033700 218 HYKNRKR|YN 0.171 . PY17X_1033700 224 RYNNLWR|QQ 0.103 . PY17X_1033700 227 NLWRQQK|KN 0.130 . PY17X_1033700 228 LWRQQKK|NI 0.175 . PY17X_1033700 232 QKKNIQK|KE 0.064 . PY17X_1033700 233 KKNIQKK|EE 0.139 . PY17X_1033700 239 KEESNSK|TI 0.063 . PY17X_1033700 251 ILDIHDR|NM 0.094 . PY17X_1033700 265 GSNNIHK|SK 0.081 . PY17X_1033700 267 NNIHKSK|TS 0.066 . PY17X_1033700 271 KSKTSLK|YY 0.082 . PY17X_1033700 294 QIAENER|NI 0.086 . PY17X_1033700 297 ENERNIK|DR 0.115 . PY17X_1033700 299 ERNIKDR|NR 0.107 . PY17X_1033700 301 NIKDRNR|LR 0.075 . PY17X_1033700 303 KDRNRLR|NY 0.104 . PY17X_1033700 310 NYSNTIK|EE 0.070 . PY17X_1033700 314 TIKEENK|II 0.071 . PY17X_1033700 317 EENKIIK|QK 0.075 . PY17X_1033700 319 NKIIKQK|DK 0.097 . PY17X_1033700 321 IIKQKDK|IK 0.060 . PY17X_1033700 323 KQKDKIK|AL 0.063 . PY17X_1033700 328 IKALLSR|TR 0.079 . PY17X_1033700 330 ALLSRTR|RC 0.070 . PY17X_1033700 331 LLSRTRR|CF 0.380 . PY17X_1033700 336 RRCFLFR|KK 0.079 . PY17X_1033700 337 RCFLFRK|KT 0.077 . PY17X_1033700 338 CFLFRKK|TL 0.077 . PY17X_1033700 341 FRKKTLR|KR 0.096 . PY17X_1033700 342 RKKTLRK|RK 0.091 . PY17X_1033700 343 KKTLRKR|KD 0.137 . PY17X_1033700 344 KTLRKRK|DK 0.334 . PY17X_1033700 346 LRKRKDK|II 0.166 . PY17X_1033700 362 TPPENGK|FN 0.078 . PY17X_1033700 369 FNDHFYK|TI 0.070 . PY17X_1033700 373 FYKTIHK|DD 0.061 . PY17X_1033700 383 ENLEEEK|IY 0.056 . PY17X_1033700 390 IYLHHNK|GN 0.070 . PY17X_1033700 395 NKGNTIK|KI 0.067 . PY17X_1033700 396 KGNTIKK|II 0.181 . PY17X_1033700 400 IKKIIYR|IF 0.081 . PY17X_1033700 429 IILISVK|SD 0.077 . PY17X_1033700 442 PSNDSLK|NF 0.076 . PY17X_1033700 454 FPYQIFK|KA 0.074 . PY17X_1033700 455 PYQIFKK|AE 0.096 . PY17X_1033700 460 KKAEVYR|LF 0.120 . PY17X_1033700 567 LLLLFLK|FS 0.056 . PY17X_1033700 595 LIGIILK|RN 0.054 . PY17X_1033700 596 IGIILKR|NQ 0.122 . PY17X_1033700 600 LKRNQLK|YF 0.071 . PY17X_1033700 604 QLKYFLK|NN 0.060 . ____________________________^_________________

  • Fasta :-

    >PY17X_1033700 ATGGAAAAAGGGAACTCTTGTTCAAATGCTAAGACATTTTTAGAATCAGAAGATAAAACT GAAAACATAAATGGCAGTAAAGAATATGACGATGATGATAATAGTTTAAAAAAAGACATT TGTTCAAATACAAGCATGGATAGTAATGCGAATGAAAATAGAGAAGCTGAGAATCAAAAT AGTGGAGAAAATGAAATAAAGAATATTAAAAACCATCGTCCATCGACAAATTCTAATGGC GAAATAACGCCATCAAATGAAGATAATATGCTATTAAGTAGTAATAATACAATAATTTTG TTAAAATGTGTAAATAATAAAAGTAAAGATAGAAATGGTTCTAAAAATAGCTCCAAAAGT AACTATAAGAAAGAGAAATACAAAAGAAGTCATACAAAAAAAGAAAAAAAGTTTAAAGTA AATAGTGCCGGTGAAGACTTATTATCTGATTCTCGCGATTATCCTTCCTTAAAAGTAAAT TATAAAATTAATAAAAAAAATCATTATGAAAAAACAAAGAAAATGGGATATCCCCAAATG ACAATGAATGATAAGAATGAACGAATTTCTAGTAGTATATGTACAGATAATGCAAGATTT ATAAATTTTTTAAAAGAGAATGGGAAAAGTGCTCATTACAAAAATCGTAAAAGATATAAT AACTTATGGAGACAACAAAAAAAAAATATTCAAAAAAAAGAAGAAAGTAATTCTAAAACA ATAAATAATTATATATTAGACATTCATGATAGAAATATGTCTAGTGCAAATATAGGATCA AATAATATACATAAATCTAAAACGTCTTTAAAATATTATACACATGATGAGCAAGGTGAG CAAGGTTATTTAAGTGAATTACAAATTGCAGAAAATGAACGAAATATAAAAGATAGAAAT CGGTTAAGAAATTATTCAAATACAATTAAAGAAGAAAATAAAATTATAAAACAAAAAGAT AAAATTAAAGCATTATTGTCTCGAACTCGACGATGCTTTTTATTTCGGAAAAAAACTTTA AGAAAACGAAAAGATAAAATTATAATATTTTTAAATAATAATTATACACCACCTGAAAAT GGAAAATTTAATGATCATTTTTATAAAACTATACATAAGGATGATTTAGAAAATTTAGAA GAAGAAAAAATATATCTTCACCATAATAAAGGAAATACTATCAAAAAAATTATATATAGA ATATTTCCACAATTTTCTATATTTAGTTTAATCTTATTTGTTACATTTATTCAATGGGTA GTCTTTATTATACTTATATCCGTAAAATCTGATTTTCCTTTAACACCATCAAATGATTCG TTAAAGAATTTTGGAAGTAATTTTCCTTATCAAATTTTTAAAAAGGCAGAAGTTTATCGC CTTTTTACAGCTTTGTTTTTGCATTCAAATTTCAATCATATTTGTGCCAATACATATGTT CAGTTAACTGTCGGATTCTTACTAGAATATTTGTATGGGACATATGTCGTTTTTTTAGTT TACGTATTCACAGGAATATATGGAATAATATTATCATCGCCTTTAACATACTGTTACTCA ACTACAGAAAGCAGTAGTAGTTCATCAGGGATTATTGGAATATTTTTTTCAGAAATTTTA ATGATGACTAATTTTAATGTAGACACAATTAGTATTAGTGTTCATTTATTTTGTTTTTTT CTTCTTCTTTTATTTCTTAAATTCTCATTGAACACTATAAGTATTAATATTTATAGCCAT TTTTTTGGTTTCATTGGAGGATTTTTGATAGGAATTATTTTAAAGCGTAATCAATTGAAA TACTTTTTAAAGAATAATTTATTAATTCAAATATTATCCCTTATTTTTCTCATTGTAAGT TTAGCAACCGCTATTTTTGTTTCAACATCTGTCATGCAGGATTGTCCATATTAG
  • Download Fasta

  • Fasta :-

    MEKGNSCSNAKTFLESEDKTENINGSKEYDDDDNSLKKDICSNTSMDSNANENREAENQN SGENEIKNIKNHRPSTNSNGEITPSNEDNMLLSSNNTIILLKCVNNKSKDRNGSKNSSKS NYKKEKYKRSHTKKEKKFKVNSAGEDLLSDSRDYPSLKVNYKINKKNHYEKTKKMGYPQM TMNDKNERISSSICTDNARFINFLKENGKSAHYKNRKRYNNLWRQQKKNIQKKEESNSKT INNYILDIHDRNMSSANIGSNNIHKSKTSLKYYTHDEQGEQGYLSELQIAENERNIKDRN RLRNYSNTIKEENKIIKQKDKIKALLSRTRRCFLFRKKTLRKRKDKIIIFLNNNYTPPEN GKFNDHFYKTIHKDDLENLEEEKIYLHHNKGNTIKKIIYRIFPQFSIFSLILFVTFIQWV VFIILISVKSDFPLTPSNDSLKNFGSNFPYQIFKKAEVYRLFTALFLHSNFNHICANTYV QLTVGFLLEYLYGTYVVFLVYVFTGIYGIILSSPLTYCYSTTESSSSSSGIIGIFFSEIL MMTNFNVDTISISVHLFCFFLLLLFLKFSLNTISINIYSHFFGFIGGFLIGIILKRNQLK YFLKNNLLIQILSLIFLIVSLATAIFVSTSVMQDCPY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_103370075 SNHRPSTNSN0.991unspPY17X_1033700440 SPSNDSLKNF0.991unsp
PY17X_1033700


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India