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Computed_GO_Component_IDs:
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Computed_GO_Components:
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Computed_GO_Function_IDs: GO:0004252
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Computed_GO_Process_IDs: GO:0006508
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Computed_GO_Processes: proteolysis
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Curated_GO_Component_IDs: GO:0005737
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Curated_GO_Components: cytoplasm
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>PY17X_1107900
MKVKYLRYIHIWSLIYHVCNVIYNRSLHIIEIRKKSEIGWGRNNRKIRILNQINNKELEI
NKNSKTNIYDIFSDDDIINNEIIMKNYYKNLKKTKFKISPKIHRLIISFKNENNMLNYPG
FMNKKFIKLLNYCGKIKKLEHVNLYLYDITPNKSELLIKFCLYALKNNKKINVEADYKLK
PIYYNKFLKNYIPKNDYSLHSNEKKKNFQINNSSMFKNSNINLKKYKKINIIEEQNDISE
LIKGTQLSNLYEKHNVNVCIIDTGINYNHPDLKDSIIDMKSTEGNYRQKKKQDNKYDFFS
VSNPIDEHGHGTFIAGIIAGNGNNININGKEGIQGINKMAKLIICKALNNNNVGNISDVL
ECFNYCAEKNAKIINASFSTKKNYPHLYYALKELEKKGIIVVTSSGNCVQKGDEEYQESK
QKGDRKTEANTKTEANTNSDGNSDGGSDGNSDSGGYRECNLNLMKLYPPAYLAKLTNLLV
VSNIDKDSNNDIILSKDSCYSNKYVNFGTQGNDILSTHINNQYAISGGSSFSAAIVTGVI
SLLFSINPNLNNNEIIDLIKNSIIQTTKLKNKVKWEGYLNVYLLIKLMIEKMGLTLVE
- Download Fasta
-
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1107900.fa
Sequence name : PY17X_1107900
Sequence length : 598
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.034
CoefTot : -0.979
ChDiff : 27
ZoneTo : 30
KR : 4
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.076 2.024 0.388 0.703
MesoH : -0.338 0.469 -0.349 0.261
MuHd_075 : 22.344 15.269 7.807 4.644
MuHd_095 : 28.741 30.581 12.563 7.424
MuHd_100 : 22.206 25.034 11.121 5.642
MuHd_105 : 32.209 28.166 12.348 8.310
Hmax_075 : 13.067 12.600 2.095 5.577
Hmax_095 : 17.300 24.238 5.944 6.921
Hmax_100 : 17.600 23.900 6.292 6.810
Hmax_105 : 16.600 24.400 4.630 7.770
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.2616 0.7384
DFMC : 0.4713 0.5287
This protein is probably imported in mitochondria.
f(Ser) = 0.0667 f(Arg) = 0.0667 CMi = 0.40816
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
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##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
598 PY17X_1107900
MKVKYLRYIHIWSLIYHVCNVIYNRSLHIIEIRKKSEIGWGRNNRKIRILNQINNKELEINKNSKTNIYDIFSDDDIINN 80
EIIMKNYYKNLKKTKFKISPKIHRLIISFKNENNMLNYPGFMNKKFIKLLNYCGKIKKLEHVNLYLYDITPNKSELLIKF 160
CLYALKNNKKINVEADYKLKPIYYNKFLKNYIPKNDYSLHSNEKKKNFQINNSSMFKNSNINLKKYKKINIIEEQNDISE 240
LIKGTQLSNLYEKHNVNVCIIDTGINYNHPDLKDSIIDMKSTEGNYRQKKKQDNKYDFFSVSNPIDEHGHGTFIAGIIAG 320
NGNNININGKEGIQGINKMAKLIICKALNNNNVGNISDVLECFNYCAEKNAKIINASFSTKKNYPHLYYALKELEKKGII 400
VVTSSGNCVQKGDEEYQESKQKGDRKTEANTKTEANTNSDGNSDGGSDGNSDSGGYRECNLNLMKLYPPAYLAKLTNLLV 480
VSNIDKDSNNDIILSKDSCYSNKYVNFGTQGNDILSTHINNQYAISGGSSFSAAIVTGVISLLFSINPNLNNNEIIDLIK 560
NSIIQTTKLKNKVKWEGYLNVYLLIKLMIEKMGLTLVE 640
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
...................................... 640
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_1107900 2 -----MK|VK 0.057 .
PY17X_1107900 4 ---MKVK|YL 0.076 .
PY17X_1107900 7 MKVKYLR|YI 0.098 .
PY17X_1107900 25 CNVIYNR|SL 0.160 .
PY17X_1107900 33 LHIIEIR|KK 0.103 .
PY17X_1107900 34 HIIEIRK|KS 0.079 .
PY17X_1107900 35 IIEIRKK|SE 0.126 .
PY17X_1107900 42 SEIGWGR|NN 0.096 .
PY17X_1107900 45 GWGRNNR|KI 0.260 .
PY17X_1107900 46 WGRNNRK|IR 0.072 .
PY17X_1107900 48 RNNRKIR|IL 0.494 .
PY17X_1107900 56 LNQINNK|EL 0.069 .
PY17X_1107900 62 KELEINK|NS 0.056 .
PY17X_1107900 65 EINKNSK|TN 0.065 .
PY17X_1107900 85 NNEIIMK|NY 0.065 .
PY17X_1107900 89 IMKNYYK|NL 0.061 .
PY17X_1107900 92 NYYKNLK|KT 0.056 .
PY17X_1107900 93 YYKNLKK|TK 0.093 .
PY17X_1107900 95 KNLKKTK|FK 0.067 .
PY17X_1107900 97 LKKTKFK|IS 0.076 .
PY17X_1107900 101 KFKISPK|IH 0.060 .
PY17X_1107900 104 ISPKIHR|LI 0.082 .
PY17X_1107900 110 RLIISFK|NE 0.068 .
PY17X_1107900 124 YPGFMNK|KF 0.067 .
PY17X_1107900 125 PGFMNKK|FI 0.091 .
PY17X_1107900 128 MNKKFIK|LL 0.072 .
PY17X_1107900 135 LLNYCGK|IK 0.064 .
PY17X_1107900 137 NYCGKIK|KL 0.069 .
PY17X_1107900 138 YCGKIKK|LE 0.083 .
PY17X_1107900 153 YDITPNK|SE 0.063 .
PY17X_1107900 159 KSELLIK|FC 0.071 .
PY17X_1107900 166 FCLYALK|NN 0.057 .
PY17X_1107900 169 YALKNNK|KI 0.059 .
PY17X_1107900 170 ALKNNKK|IN 0.083 .
PY17X_1107900 178 NVEADYK|LK 0.054 .
PY17X_1107900 180 EADYKLK|PI 0.061 .
PY17X_1107900 186 KPIYYNK|FL 0.069 .
PY17X_1107900 189 YYNKFLK|NY 0.069 .
PY17X_1107900 194 LKNYIPK|ND 0.066 .
PY17X_1107900 204 SLHSNEK|KK 0.064 .
PY17X_1107900 205 LHSNEKK|KN 0.152 .
PY17X_1107900 206 HSNEKKK|NF 0.138 .
PY17X_1107900 217 NNSSMFK|NS 0.070 .
PY17X_1107900 224 NSNINLK|KY 0.068 .
PY17X_1107900 225 SNINLKK|YK 0.111 .
PY17X_1107900 227 INLKKYK|KI 0.088 .
PY17X_1107900 228 NLKKYKK|IN 0.103 .
PY17X_1107900 243 DISELIK|GT 0.068 .
PY17X_1107900 253 LSNLYEK|HN 0.061 .
PY17X_1107900 273 YNHPDLK|DS 0.076 .
PY17X_1107900 280 DSIIDMK|ST 0.097 .
PY17X_1107900 287 STEGNYR|QK 0.086 .
PY17X_1107900 289 EGNYRQK|KK 0.067 .
PY17X_1107900 290 GNYRQKK|KQ 0.381 .
PY17X_1107900 291 NYRQKKK|QD 0.141 .
PY17X_1107900 295 KKKQDNK|YD 0.066 .
PY17X_1107900 330 NININGK|EG 0.072 .
PY17X_1107900 338 GIQGINK|MA 0.064 .
PY17X_1107900 341 GINKMAK|LI 0.073 .
PY17X_1107900 346 AKLIICK|AL 0.060 .
PY17X_1107900 369 FNYCAEK|NA 0.070 .
PY17X_1107900 372 CAEKNAK|II 0.083 .
PY17X_1107900 381 NASFSTK|KN 0.078 .
PY17X_1107900 382 ASFSTKK|NY 0.081 .
PY17X_1107900 392 HLYYALK|EL 0.072 .
PY17X_1107900 396 ALKELEK|KG 0.059 .
PY17X_1107900 397 LKELEKK|GI 0.118 .
PY17X_1107900 411 SGNCVQK|GD 0.097 .
PY17X_1107900 420 EEYQESK|QK 0.065 .
PY17X_1107900 422 YQESKQK|GD 0.071 .
PY17X_1107900 425 SKQKGDR|KT 0.125 .
PY17X_1107900 426 KQKGDRK|TE 0.071 .
PY17X_1107900 432 KTEANTK|TE 0.054 .
PY17X_1107900 457 SDSGGYR|EC 0.090 .
PY17X_1107900 465 CNLNLMK|LY 0.058 .
PY17X_1107900 474 PPAYLAK|LT 0.068 .
PY17X_1107900 486 VVSNIDK|DS 0.066 .
PY17X_1107900 496 NDIILSK|DS 0.071 .
PY17X_1107900 503 DSCYSNK|YV 0.096 .
PY17X_1107900 560 EIIDLIK|NS 0.059 .
PY17X_1107900 568 SIIQTTK|LK 0.062 .
PY17X_1107900 570 IQTTKLK|NK 0.060 .
PY17X_1107900 572 TTKLKNK|VK 0.067 .
PY17X_1107900 574 KLKNKVK|WE 0.072 .
PY17X_1107900 586 NVYLLIK|LM 0.058 .
PY17X_1107900 591 IKLMIEK|MG 0.057 .
____________________________^_________________
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Fasta :-
>PY17X_1107900
ATGAAAGTTAAATATTTGCGATATATACATATATGGTCTTTAATATATCATGTTTGTAAT
GTAATTTATAATAGATCATTACATATTATTGAGATTAGGAAAAAAAGTGAGATAGGATGG
GGAAGGAATAACAGAAAAATAAGAATTTTAAATCAAATAAATAATAAAGAATTAGAAATA
AATAAAAATAGTAAGACAAATATATATGATATATTTTCCGATGATGATATTATTAATAAT
GAAATAATTATGAAAAATTATTATAAAAATTTAAAGAAGACTAAATTTAAAATATCTCCA
AAAATTCATAGATTAATTATAAGTTTTAAAAATGAAAATAATATGTTAAATTATCCTGGT
TTTATGAATAAAAAATTTATTAAACTACTTAATTATTGTGGTAAAATAAAAAAATTAGAA
CATGTTAATTTATATCTTTATGATATAACCCCAAATAAAAGTGAACTATTAATAAAATTT
TGTTTATATGCTTTAAAAAATAATAAAAAAATTAATGTTGAAGCTGATTATAAGCTTAAA
CCAATTTATTATAATAAATTTTTAAAGAATTATATTCCAAAAAATGATTATTCTTTACAT
TCTAATGAAAAAAAGAAAAATTTCCAAATAAATAATTCATCTATGTTTAAAAATAGTAAT
ATAAATTTAAAAAAATATAAAAAAATAAATATTATCGAAGAACAAAATGATATAAGCGAA
TTAATTAAAGGAACCCAACTGTCTAATTTATATGAAAAACATAATGTTAATGTTTGTATT
ATAGATACAGGAATAAATTATAATCATCCAGATTTAAAAGATTCTATAATTGATATGAAA
TCTACTGAAGGAAATTATCGTCAAAAAAAAAAACAAGATAATAAATATGATTTTTTTAGT
GTCTCTAACCCAATAGATGAACATGGTCATGGTACTTTTATAGCTGGAATTATTGCTGGG
AATGGAAATAATATTAATATAAATGGGAAAGAGGGAATACAAGGAATAAATAAAATGGCA
AAATTAATAATTTGTAAAGCTTTAAATAATAATAACGTTGGTAATATAAGTGATGTATTA
GAATGTTTTAATTATTGTGCAGAAAAAAATGCAAAAATCATTAATGCAAGCTTTTCCACT
AAAAAAAATTATCCCCATTTATATTATGCATTAAAGGAGTTGGAAAAAAAAGGAATTATC
GTCGTTACATCTTCGGGAAATTGCGTGCAAAAAGGGGATGAAGAATATCAAGAAAGCAAA
CAAAAAGGGGACAGGAAAACGGAGGCGAATACTAAAACGGAAGCGAATACTAATAGCGAT
GGCAATAGTGATGGTGGCAGTGATGGAAATAGTGATAGTGGTGGGTATAGAGAGTGCAAC
CTAAATTTAATGAAATTGTATCCACCCGCTTATTTAGCAAAGTTAACAAATTTATTAGTT
GTTTCTAATATTGATAAGGATTCAAATAATGATATTATTTTATCCAAAGATTCATGTTAT
AGTAATAAATATGTTAATTTTGGAACCCAAGGAAATGATATTTTATCGACGCATATTAAT
AATCAATATGCTATAAGTGGTGGTTCATCTTTTTCAGCTGCTATTGTTACCGGAGTTATT
TCATTATTATTTTCAATAAACCCCAATTTAAATAATAATGAAATTATTGATCTAATTAAA
AATTCAATAATACAAACAACTAAGTTGAAAAATAAGGTTAAGTGGGAAGGATATTTAAAT
GTTTATTTGCTTATTAAACTGATGATAGAGAAAATGGGACTTACACTAGTGGAATAA
- Download Fasta
- title: active site
- coordinates: H310,F378,S530
Loading, please wait...
| ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
|---|
| PY17X_1107900 | 379 S | NASFSTKKN | 0.993 | unsp | PY17X_1107900 | 379 S | NASFSTKKN | 0.993 | unsp | PY17X_1107900 | 379 S | NASFSTKKN | 0.993 | unsp | PY17X_1107900 | 99 S | KFKISPKIH | 0.997 | unsp | PY17X_1107900 | 275 S | DLKDSIIDM | 0.994 | unsp |
