PY17X_1131900 | proteasome subunit alpha type-7, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1131900OTHER0.9999380.0000260.000035
No Results

  • Fasta :-

    >PY17X_1131900 MSYDRAITVFSPDGHLLQVEHALEAVKKGGCAVAIKSSNFAVLAVEKKNIPKLQNPRTTE KLVKLDEHTCLAFSGLNADARILVNKTRLECQRYYLNMDQPAPVDYIAKYVARIQQKFTH RGGVRPFGIATLITGFKNNKEICIYQTEPSGIYASWKAQAIGKNAKVVQEFLEKNYQENM EKNECLLLALKAIFEVVELSSKNVELALLTEEELKYIDEQEVNSLVEIIDNERTKKNAQN E
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1131900.fa Sequence name : PY17X_1131900 Sequence length : 241 VALUES OF COMPUTED PARAMETERS Coef20 : 3.580 CoefTot : -0.045 ChDiff : 0 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.906 1.665 0.127 0.499 MesoH : -1.185 0.050 -0.547 0.104 MuHd_075 : 28.573 14.937 6.543 4.663 MuHd_095 : 12.129 9.750 3.119 2.812 MuHd_100 : 14.109 14.515 5.303 4.707 MuHd_105 : 15.524 17.553 6.307 6.098 Hmax_075 : 12.862 11.025 1.795 4.043 Hmax_095 : 7.000 6.037 0.113 3.526 Hmax_100 : 7.400 12.100 0.248 4.210 Hmax_105 : 3.600 11.600 -0.028 4.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9843 0.0157 DFMC : 0.9806 0.0194
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 241 PY17X_1131900 MSYDRAITVFSPDGHLLQVEHALEAVKKGGCAVAIKSSNFAVLAVEKKNIPKLQNPRTTEKLVKLDEHTCLAFSGLNADA 80 RILVNKTRLECQRYYLNMDQPAPVDYIAKYVARIQQKFTHRGGVRPFGIATLITGFKNNKEICIYQTEPSGIYASWKAQA 160 IGKNAKVVQEFLEKNYQENMEKNECLLLALKAIFEVVELSSKNVELALLTEEELKYIDEQEVNSLVEIIDNERTKKNAQN 240 E 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 . 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1131900 5 --MSYDR|AI 0.082 . PY17X_1131900 27 HALEAVK|KG 0.060 . PY17X_1131900 28 ALEAVKK|GG 0.115 . PY17X_1131900 36 GCAVAIK|SS 0.079 . PY17X_1131900 47 AVLAVEK|KN 0.062 . PY17X_1131900 48 VLAVEKK|NI 0.105 . PY17X_1131900 52 EKKNIPK|LQ 0.060 . PY17X_1131900 57 PKLQNPR|TT 0.086 . PY17X_1131900 61 NPRTTEK|LV 0.081 . PY17X_1131900 64 TTEKLVK|LD 0.063 . PY17X_1131900 81 GLNADAR|IL 0.104 . PY17X_1131900 86 ARILVNK|TR 0.063 . PY17X_1131900 88 ILVNKTR|LE 0.081 . PY17X_1131900 93 TRLECQR|YY 0.089 . PY17X_1131900 109 PVDYIAK|YV 0.083 . PY17X_1131900 113 IAKYVAR|IQ 0.104 . PY17X_1131900 117 VARIQQK|FT 0.088 . PY17X_1131900 121 QQKFTHR|GG 0.079 . PY17X_1131900 125 THRGGVR|PF 0.108 . PY17X_1131900 137 TLITGFK|NN 0.058 . PY17X_1131900 140 TGFKNNK|EI 0.070 . PY17X_1131900 157 GIYASWK|AQ 0.074 . PY17X_1131900 163 KAQAIGK|NA 0.074 . PY17X_1131900 166 AIGKNAK|VV 0.077 . PY17X_1131900 174 VQEFLEK|NY 0.056 . PY17X_1131900 182 YQENMEK|NE 0.055 . PY17X_1131900 191 CLLLALK|AI 0.060 . PY17X_1131900 202 VVELSSK|NV 0.071 . PY17X_1131900 215 LTEEELK|YI 0.076 . PY17X_1131900 233 EIIDNER|TK 0.068 . PY17X_1131900 235 IDNERTK|KN 0.076 . PY17X_1131900 236 DNERTKK|NA 0.301 . ____________________________^_________________

  • Fasta :-

    >PY17X_1131900 ATGAGTTATGATAGAGCTATAACAGTATTTAGTCCAGATGGGCATTTATTACAAGTAGAG CATGCTTTAGAAGCAGTAAAAAAAGGTGGTTGTGCAGTGGCCATAAAAAGTTCAAATTTC GCTGTTTTGGCTGTTGAAAAAAAAAATATCCCAAAACTTCAGAACCCAAGAACAACAGAA AAGTTAGTTAAACTTGATGAGCATACTTGTTTGGCTTTCTCAGGTTTAAATGCAGATGCA CGAATTTTAGTTAATAAGACTCGTTTGGAATGTCAAAGATATTACTTAAATATGGATCAA CCTGCACCTGTTGATTATATAGCAAAATATGTTGCCAGAATACAACAAAAGTTTACTCAT AGAGGAGGGGTTCGACCTTTTGGAATAGCAACATTGATAACTGGATTTAAAAATAATAAA GAAATTTGTATATATCAAACTGAACCTAGTGGGATATATGCATCTTGGAAAGCCCAAGCA ATAGGGAAGAATGCTAAGGTTGTTCAGGAATTTTTAGAAAAAAATTACCAAGAAAATATG GAAAAAAATGAGTGTCTTCTTTTGGCTTTGAAGGCTATATTTGAGGTTGTCGAATTGAGC AGCAAAAATGTTGAACTTGCTCTCCTCACAGAAGAAGAATTAAAATATATCGACGAACAA GAAGTTAATTCATTGGTTGAAATAATTGATAATGAGAGGACAAAAAAAAATGCCCAAAAT GAATAA
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  • Fasta :-

    MSYDRAITVFSPDGHLLQVEHALEAVKKGGCAVAIKSSNFAVLAVEKKNIPKLQNPRTTE KLVKLDEHTCLAFSGLNADARILVNKTRLECQRYYLNMDQPAPVDYIAKYVARIQQKFTH RGGVRPFGIATLITGFKNNKEICIYQTEPSGIYASWKAQAIGKNAKVVQEFLEKNYQENM EKNECLLLALKAIFEVVELSSKNVELALLTEEELKYIDEQEVNSLVEIIDNERTKKNAQN E

  • title: active site
  • coordinates: G30,E46,K48,K61,K163
No Results
No Results
IDSitePeptideScoreMethod
PY17X_113190059 TNPRTTEKLV0.992unsp
PY17X_1131900


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India