PY17X_1208300 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PY17X_1208300OTHER0.9997280.0000720.000199
No Results

  • Fasta :-

    >PY17X_1208300 MQSKEKLRGGNSITLDNKDVETSQINDSTTIYIPDVNSSMVYLNIYDLDPVSKVLNSVVK PIGTGAFHAGVEVYGYEYSFGYVADGKTGVMKSDPRYHPYHVYRESISMGKTPLTKTEVN LLVDVMKLQWIGDTYDILSRNCLNYADYFCNLLDVGGVPDWVMSLQKNLIWVKSNINVAS SKLKELNKASGLPNVLNYVKKKCIKKNENPKKCKVVLK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1208300.fa Sequence name : PY17X_1208300 Sequence length : 218 VALUES OF COMPUTED PARAMETERS Coef20 : 3.372 CoefTot : -0.156 ChDiff : 6 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.506 0.976 -0.078 0.462 MesoH : -0.576 0.211 -0.383 0.230 MuHd_075 : 9.885 4.638 2.682 3.110 MuHd_095 : 11.259 3.721 1.560 1.531 MuHd_100 : 13.350 2.926 2.768 2.375 MuHd_105 : 18.021 6.727 5.320 3.739 Hmax_075 : 1.400 0.817 -1.687 2.228 Hmax_095 : -5.200 -1.700 -3.780 0.170 Hmax_100 : -4.900 -1.000 -3.432 0.470 Hmax_105 : 4.550 3.383 -0.509 2.298 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9371 0.0629 DFMC : 0.9466 0.0534
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 218 PY17X_1208300 MQSKEKLRGGNSITLDNKDVETSQINDSTTIYIPDVNSSMVYLNIYDLDPVSKVLNSVVKPIGTGAFHAGVEVYGYEYSF 80 GYVADGKTGVMKSDPRYHPYHVYRESISMGKTPLTKTEVNLLVDVMKLQWIGDTYDILSRNCLNYADYFCNLLDVGGVPD 160 WVMSLQKNLIWVKSNINVASSKLKELNKASGLPNVLNYVKKKCIKKNENPKKCKVVLK 240 ................................................................................ 80 ................................................................................ 160 .......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1208300 4 ---MQSK|EK 0.066 . PY17X_1208300 6 -MQSKEK|LR 0.063 . PY17X_1208300 8 QSKEKLR|GG 0.092 . PY17X_1208300 18 SITLDNK|DV 0.096 . PY17X_1208300 53 DLDPVSK|VL 0.061 . PY17X_1208300 60 VLNSVVK|PI 0.096 . PY17X_1208300 87 GYVADGK|TG 0.053 . PY17X_1208300 92 GKTGVMK|SD 0.082 . PY17X_1208300 96 VMKSDPR|YH 0.073 . PY17X_1208300 104 HPYHVYR|ES 0.136 . PY17X_1208300 111 ESISMGK|TP 0.056 . PY17X_1208300 116 GKTPLTK|TE 0.056 . PY17X_1208300 127 LLVDVMK|LQ 0.068 . PY17X_1208300 140 TYDILSR|NC 0.069 . PY17X_1208300 167 WVMSLQK|NL 0.064 . PY17X_1208300 173 KNLIWVK|SN 0.074 . PY17X_1208300 182 INVASSK|LK 0.062 . PY17X_1208300 184 VASSKLK|EL 0.074 . PY17X_1208300 188 KLKELNK|AS 0.060 . PY17X_1208300 200 NVLNYVK|KK 0.055 . PY17X_1208300 201 VLNYVKK|KC 0.123 . PY17X_1208300 202 LNYVKKK|CI 0.184 . PY17X_1208300 205 VKKKCIK|KN 0.064 . PY17X_1208300 206 KKKCIKK|NE 0.086 . PY17X_1208300 211 KKNENPK|KC 0.072 . PY17X_1208300 212 KNENPKK|CK 0.097 . PY17X_1208300 214 ENPKKCK|VV 0.078 . PY17X_1208300 218 KCKVVLK|-- 0.074 . ____________________________^_________________

  • Fasta :-

    >PY17X_1208300 ATGCAAAGCAAAGAAAAATTAAGAGGTGGGAATTCTATAACACTGGACAATAAAGATGTA GAAACATCTCAAATTAATGATTCTACTACAATATATATACCAGATGTTAATTCAAGCATG GTTTATTTAAATATATACGATTTAGATCCTGTTTCAAAAGTTCTTAATTCTGTTGTAAAG CCTATTGGAACAGGCGCTTTCCATGCTGGAGTTGAAGTATATGGTTATGAATATTCGTTT GGTTATGTGGCGGATGGTAAAACTGGAGTAATGAAATCGGATCCAAGATATCATCCCTAT CATGTTTATCGTGAAAGTATTTCTATGGGTAAAACACCATTGACAAAAACCGAAGTTAAT CTCCTTGTCGACGTTATGAAACTTCAATGGATTGGAGACACATATGATATATTATCAAGG AACTGTTTAAACTATGCCGATTATTTTTGTAATTTATTAGATGTTGGAGGGGTACCTGAT TGGGTAATGAGTTTGCAAAAAAATCTAATCTGGGTCAAATCAAATATTAATGTTGCATCT AGTAAATTGAAGGAATTAAATAAAGCTTCTGGATTGCCAAATGTTTTAAATTATGTTAAA AAAAAGTGCATCAAAAAAAATGAAAATCCAAAAAAATGTAAAGTTGTTTTAAAATAA
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  • Fasta :-

    MQSKEKLRGGNSITLDNKDVETSQINDSTTIYIPDVNSSMVYLNIYDLDPVSKVLNSVVK PIGTGAFHAGVEVYGYEYSFGYVADGKTGVMKSDPRYHPYHVYRESISMGKTPLTKTEVN LLVDVMKLQWIGDTYDILSRNCLNYADYFCNLLDVGGVPDWVMSLQKNLIWVKSNINVAS SKLKELNKASGLPNVLNYVKKKCIKKNENPKKCKVVLK

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PY17X_1208300


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India