PY17X_1209800 | 26S protease regulatory subunit 4, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1209800OTHER0.9999870.0000020.000011
No Results

  • Fasta :-

    >PY17X_1209800 MGNAQGGMNNNPYGFLGKKDDKDKGKDKEKKKLESSPPSHIGKRKKKKKGATGHSKLPTV TPNTKCRLKLLKLERIKDYLLLEEEFITNQEQIKTTDDKNYGKLKIDDLRGSPMSVGTLE ELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSV MKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKT LLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEDHAPSIVFIDEIDAVGTK RYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL PNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMK ITQLDLRKARDKALYQKKGNIPEGLYL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1209800.fa Sequence name : PY17X_1209800 Sequence length : 447 VALUES OF COMPUTED PARAMETERS Coef20 : 2.412 CoefTot : -2.314 ChDiff : 1 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.671 1.453 -0.008 0.502 MesoH : -0.728 0.408 -0.388 0.253 MuHd_075 : 20.582 9.391 6.979 4.397 MuHd_095 : 19.925 15.806 4.800 3.445 MuHd_100 : 15.491 12.606 3.301 2.595 MuHd_105 : 5.714 5.943 2.568 0.922 Hmax_075 : 5.483 2.217 -0.534 3.453 Hmax_095 : 10.600 7.100 -0.676 3.540 Hmax_100 : 10.600 7.100 -0.676 3.470 Hmax_105 : 2.400 0.175 -3.722 1.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9895 0.0105 DFMC : 0.9862 0.0138
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 447 PY17X_1209800 MGNAQGGMNNNPYGFLGKKDDKDKGKDKEKKKLESSPPSHIGKRKKKKKGATGHSKLPTVTPNTKCRLKLLKLERIKDYL 80 LLEEEFITNQEQIKTTDDKNYGKLKIDDLRGSPMSVGTLEELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLN 160 NKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKT 240 LLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEDHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELL 320 NQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGA 400 DIKAICTEAGLLALRERRMKITQLDLRKARDKALYQKKGNIPEGLYL 480 ..............................................P................................. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PY17X_1209800 18 PYGFLGK|KD 0.058 . PY17X_1209800 19 YGFLGKK|DD 0.105 . PY17X_1209800 22 LGKKDDK|DK 0.073 . PY17X_1209800 24 KKDDKDK|GK 0.076 . PY17X_1209800 26 DDKDKGK|DK 0.089 . PY17X_1209800 28 KDKGKDK|EK 0.073 . PY17X_1209800 30 KGKDKEK|KK 0.059 . PY17X_1209800 31 GKDKEKK|KL 0.148 . PY17X_1209800 32 KDKEKKK|LE 0.097 . PY17X_1209800 43 PPSHIGK|RK 0.075 . PY17X_1209800 44 PSHIGKR|KK 0.247 . PY17X_1209800 45 SHIGKRK|KK 0.115 . PY17X_1209800 46 HIGKRKK|KK 0.133 . PY17X_1209800 47 IGKRKKK|KK 0.528 *ProP* PY17X_1209800 48 GKRKKKK|KG 0.152 . PY17X_1209800 49 KRKKKKK|GA 0.258 . PY17X_1209800 56 GATGHSK|LP 0.064 . PY17X_1209800 65 TVTPNTK|CR 0.056 . PY17X_1209800 67 TPNTKCR|LK 0.110 . PY17X_1209800 69 NTKCRLK|LL 0.054 . PY17X_1209800 72 CRLKLLK|LE 0.058 . PY17X_1209800 75 KLLKLER|IK 0.080 . PY17X_1209800 77 LKLERIK|DY 0.063 . PY17X_1209800 94 TNQEQIK|TT 0.080 . PY17X_1209800 99 IKTTDDK|NY 0.065 . PY17X_1209800 103 DDKNYGK|LK 0.065 . PY17X_1209800 105 KNYGKLK|ID 0.064 . PY17X_1209800 110 LKIDDLR|GS 0.092 . PY17X_1209800 148 ILSFVDK|DL 0.094 . PY17X_1209800 162 SVLLNNK|TN 0.058 . PY17X_1209800 182 PLVSVMK|VE 0.060 . PY17X_1209800 185 SVMKVEK|AP 0.060 . PY17X_1209800 205 SQIQEIK|EA 0.063 . PY17X_1209800 224 YEDIGIK|PP 0.057 . PY17X_1209800 227 IGIKPPK|GV 0.097 . PY17X_1209800 239 GPPGTGK|TL 0.061 . PY17X_1209800 244 GKTLLAK|AV 0.077 . PY17X_1209800 256 TSATFLR|VV 0.199 . PY17X_1209800 265 GSELIQK|YL 0.086 . PY17X_1209800 272 YLGDGPK|LV 0.074 . PY17X_1209800 275 DGPKLVR|EM 0.078 . PY17X_1209800 279 LVREMFK|VA 0.088 . PY17X_1209800 300 IDAVGTK|RY 0.061 . PY17X_1209800 301 DAVGTKR|YE 0.162 . PY17X_1209800 310 ATSGGER|EI 0.079 . PY17X_1209800 314 GEREIQR|TM 0.087 . PY17X_1209800 329 LDGFDSR|GD 0.100 . PY17X_1209800 333 DSRGDVK|VI 0.062 . PY17X_1209800 340 VIMATNR|ID 0.079 . PY17X_1209800 350 LDPALIR|PG 0.073 . PY17X_1209800 353 ALIRPGR|ID 0.232 . PY17X_1209800 356 RPGRIDR|KI 0.193 . PY17X_1209800 357 PGRIDRK|IQ 0.077 . PY17X_1209800 366 LPNPDTK|TK 0.073 . PY17X_1209800 368 NPDTKTK|RR 0.069 . PY17X_1209800 369 PDTKTKR|RI 0.226 . PY17X_1209800 370 DTKTKRR|IF 0.136 . PY17X_1209800 378 FQIHTSK|MT 0.061 . PY17X_1209800 394 EEFVMSK|DE 0.060 . PY17X_1209800 403 LSGADIK|AI 0.069 . PY17X_1209800 415 AGLLALR|ER 0.068 . PY17X_1209800 417 LLALRER|RM 0.078 . PY17X_1209800 418 LALRERR|MK 0.466 . PY17X_1209800 420 LRERRMK|IT 0.120 . PY17X_1209800 427 ITQLDLR|KA 0.086 . PY17X_1209800 428 TQLDLRK|AR 0.091 . PY17X_1209800 430 LDLRKAR|DK 0.312 . PY17X_1209800 432 LRKARDK|AL 0.081 . PY17X_1209800 437 DKALYQK|KG 0.060 . PY17X_1209800 438 KALYQKK|GN 0.119 . ____________________________^_________________

  • Fasta :-

    >PY17X_1209800 ATGGGGAATGCACAAGGTGGTATGAATAATAATCCCTATGGATTTTTAGGAAAAAAGGAT GATAAAGACAAAGGAAAAGATAAGGAAAAAAAAAAGCTAGAAAGCTCACCTCCATCACAT ATAGGAAAAAGAAAAAAAAAGAAAAAGGGAGCCACTGGACATTCCAAACTGCCTACTGTC ACTCCTAATACAAAATGTCGATTAAAATTATTAAAATTAGAAAGGATAAAAGATTATTTA TTATTAGAAGAAGAATTTATAACAAATCAAGAACAGATAAAAACAACTGATGATAAAAAT TATGGAAAATTAAAAATTGACGATTTAAGAGGTTCACCTATGAGTGTTGGAACATTAGAA GAATTGATTGATGAAAATCATGGAATTATAGCTACTTCAGTAGGTCCAGAATATTATGTA AATATATTATCGTTTGTCGATAAAGATTTATTAGAACCTGGGTGTTCAGTTTTATTAAAT AATAAAACTAATAGTGTTGTAGGTATACTATTAGATGAAGTTGATCCGTTAGTATCTGTT ATGAAAGTTGAAAAGGCTCCACTAGAATCATATGCTGATATTGGTGGATTAGAATCACAA ATACAAGAAATAAAAGAAGCAGTAGAATTACCCTTAACTCATCCTGAATTATATGAAGAT ATTGGTATTAAACCCCCCAAAGGTGTAATTTTATATGGGCCACCTGGTACTGGAAAAACA TTATTAGCAAAAGCTGTAGCAAATGAAACATCTGCTACATTCTTAAGAGTTGTAGGTTCT GAATTAATACAAAAATATTTAGGAGATGGTCCCAAATTAGTTAGAGAAATGTTTAAGGTT GCTGAAGATCATGCACCTTCTATTGTTTTTATTGATGAAATTGATGCAGTTGGTACAAAA AGATACGAAGCAACGAGTGGTGGAGAAAGAGAAATTCAAAGAACTATGTTAGAATTATTA AATCAATTAGATGGATTTGATTCACGAGGTGATGTTAAAGTTATTATGGCTACTAATAGA ATCGATTCTTTAGATCCTGCTTTAATTAGGCCAGGTAGAATAGATAGAAAAATTCAATTG CCAAATCCAGATACTAAAACTAAGAGAAGAATTTTCCAAATACATACTAGTAAAATGACA ATGTCTCCTGATGTTGATCTAGAAGAATTTGTAATGTCAAAAGATGAATTATCCGGTGCC GATATCAAAGCTATATGTACTGAAGCAGGTTTATTAGCTCTTCGAGAAAGAAGAATGAAA ATAACTCAACTCGATTTACGTAAGGCAAGAGATAAAGCTTTGTATCAGAAAAAGGGAAAC ATACCAGAGGGACTATATTTGTAA
  • Download Fasta

  • Fasta :-

    MGNAQGGMNNNPYGFLGKKDDKDKGKDKEKKKLESSPPSHIGKRKKKKKGATGHSKLPTV TPNTKCRLKLLKLERIKDYLLLEEEFITNQEQIKTTDDKNYGKLKIDDLRGSPMSVGTLE ELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSV MKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKT LLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEDHAPSIVFIDEIDAVGTK RYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL PNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMK ITQLDLRKARDKALYQKKGNIPEGLYL

  • title: ATP binding site
  • coordinates: P234,P235,G236,T237,G238,K239,T240,L241,D292,N339
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1209800306 SYEATSGGER0.996unspPY17X_1209800398 SKDELSGADI0.993unsp
PY17X_1209800


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India