PY17X_1213000 | proteasome subunit beta type-5, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1213000OTHER0.9999290.0000440.000028
No Results

  • Fasta :-

    >PY17X_1213000 MMEYSTDFMNQIDNLINDEEENVNTTDELEFCVAPISVPRDFIKYAKTENKKLFDFHKGT TTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKYILGTMAGGAADCFYWEKYLGQ IIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKV EGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSGGKVRVFYIHK NGYSKIIEGEDVYDLHYHYTNPSQKDQYVM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1213000.fa Sequence name : PY17X_1213000 Sequence length : 270 VALUES OF COMPUTED PARAMETERS Coef20 : 3.100 CoefTot : 0.000 ChDiff : -10 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.965 1.071 0.164 0.470 MesoH : -0.457 0.292 -0.288 0.231 MuHd_075 : 26.919 11.918 5.989 2.638 MuHd_095 : 43.705 28.790 12.318 8.330 MuHd_100 : 50.889 33.091 13.911 9.141 MuHd_105 : 46.717 31.318 12.829 8.302 Hmax_075 : 0.700 3.200 -3.477 2.220 Hmax_095 : 16.600 15.400 2.623 5.820 Hmax_100 : 20.700 18.600 3.145 6.200 Hmax_105 : 20.400 18.600 3.171 6.200 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7479 0.2521 DFMC : 0.8202 0.1798
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 270 PY17X_1213000 MMEYSTDFMNQIDNLINDEEENVNTTDELEFCVAPISVPRDFIKYAKTENKKLFDFHKGTTTLAFKFKEGIIVAVDSRAS 80 MGSFISSQNVEKIIEINKYILGTMAGGAADCFYWEKYLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIIL 160 SGYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSGGKVRVFYIHK 240 NGYSKIIEGEDVYDLHYHYTNPSQKDQYVM 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1213000 40 APISVPR|DF 0.142 . PY17X_1213000 44 VPRDFIK|YA 0.093 . PY17X_1213000 47 DFIKYAK|TE 0.066 . PY17X_1213000 51 YAKTENK|KL 0.069 . PY17X_1213000 52 AKTENKK|LF 0.084 . PY17X_1213000 58 KLFDFHK|GT 0.075 . PY17X_1213000 66 TTTLAFK|FK 0.073 . PY17X_1213000 68 TLAFKFK|EG 0.078 . PY17X_1213000 78 IVAVDSR|AS 0.100 . PY17X_1213000 92 SSQNVEK|II 0.076 . PY17X_1213000 98 KIIEINK|YI 0.062 . PY17X_1213000 116 DCFYWEK|YL 0.089 . PY17X_1213000 123 YLGQIIK|IY 0.062 . PY17X_1213000 128 IKIYELR|NN 0.090 . PY17X_1213000 132 ELRNNEK|IS 0.063 . PY17X_1213000 136 NEKISVR|AA 0.145 . PY17X_1213000 150 NILYQYK|GY 0.066 . PY17X_1213000 178 YIDDEGK|KV 0.078 . PY17X_1213000 179 IDDEGKK|VE 0.080 . PY17X_1213000 216 QAVELGR|NA 0.080 . PY17X_1213000 225 IYHATFR|DG 0.149 . PY17X_1213000 232 DGGSGGK|VR 0.050 . PY17X_1213000 234 GSGGKVR|VF 0.097 . PY17X_1213000 240 RVFYIHK|NG 0.057 . PY17X_1213000 245 HKNGYSK|II 0.073 . PY17X_1213000 265 YTNPSQK|DQ 0.075 . ____________________________^_________________

  • Fasta :-

    >PY17X_1213000 ATGATGGAATACAGTACTGACTTTATGAACCAAATTGATAATTTGATAAACGATGAAGAA GAAAATGTCAACACTACTGATGAACTTGAATTTTGTGTAGCCCCAATAAGTGTTCCAAGA GATTTCATAAAATATGCAAAAACAGAAAATAAAAAATTGTTTGATTTTCATAAGGGTACT ACAACATTAGCATTTAAATTTAAGGAAGGTATTATTGTTGCAGTGGATTCAAGAGCTTCT ATGGGTTCTTTTATATCTTCTCAAAATGTAGAAAAAATTATTGAAATAAATAAATACATA TTAGGAACAATGGCAGGTGGAGCAGCTGATTGTTTTTATTGGGAAAAATATTTAGGTCAA ATAATTAAAATATATGAATTAAGAAATAATGAAAAAATATCAGTTAGAGCAGCTAGTACA ATATTAAGTAATATTTTATATCAATACAAAGGATATGGTTTATGTTGTGGAATAATATTA AGTGGTTATGATCATACTGGTTTTAATATGTTTTATATTGATGATGAAGGTAAAAAGGTT GAAGGAAATTTATTTAGTTGTGGTAGTGGTAGTACATATGCTTATTCTATTTTAGATTCC GCTTATGATTATAATTTATCAGTTGAACAAGCAGTTGAACTTGGTAGAAATGCAATTTAT CATGCTACATTTAGAGATGGAGGTTCAGGTGGAAAAGTAAGAGTTTTTTATATACATAAA AATGGATATAGCAAAATTATTGAAGGTGAAGATGTATATGACTTACATTATCACTATACA AATCCATCACAAAAGGATCAATATGTTATGTAA
  • Download Fasta

  • Fasta :-

    MMEYSTDFMNQIDNLINDEEENVNTTDELEFCVAPISVPRDFIKYAKTENKKLFDFHKGT TTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKYILGTMAGGAADCFYWEKYLGQ IIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKV EGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSGGKVRVFYIHK NGYSKIIEGEDVYDLHYHYTNPSQKDQYVM

  • title: active site
  • coordinates: T60,D76,R78,K92,S189,D226,S229,G230
No Results
No Results
IDSitePeptideScoreMethod
PY17X_1213000263 SYTNPSQKDQ0.996unsp
PY17X_1213000


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India