Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1223500.fa
Sequence name : PY17X_1223500
Sequence length : 376
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.359
CoefTot : -0.065
ChDiff : 3
ZoneTo : 7
KR : 0
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.229 1.335 0.006 0.549
MesoH : -0.523 0.365 -0.380 0.224
MuHd_075 : 11.646 10.295 3.501 1.864
MuHd_095 : 13.729 7.903 5.568 2.121
MuHd_100 : 9.024 5.518 4.277 0.969
MuHd_105 : 4.172 2.705 2.551 0.202
Hmax_075 : -9.450 -6.562 -5.061 -1.925
Hmax_095 : -6.825 -5.863 -3.613 -1.181
Hmax_100 : -10.400 -6.400 -4.850 -2.020
Hmax_105 : -12.600 -8.700 -5.520 -1.660
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.9871 0.0129
DFMC : 0.9442 0.0558
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
376 PY17X_1223500
MVSNQSTENDKQKSSKSNEKTKKVEKLDGKPKTDTFHNKNGLAIKTYAWEVKNPIAILFIIHGLSGNARLEYLKHNVILE 80
GYEKAIVKDPDNFYIYKGSWVDEFNKKGISVYGLDLQGHGLSDGWENLKKHINEFDDMVYDVLQFINRVHDTLCLEKHKN 160
DINNGDNTSSLHNNIINTKLAPFYIMGQSMGGNIVMRLLETLGKSKDIATNNNKINIKGAISLAGMISIEEVINKPSYKY 240
FYLPFSKVLSTVFPSLRVIPQLYFKKFPFVNDIYCLDKNVCKKPITCKLGYELFKAVENLNNDINYFPKDVSLLFIHSKI 320
DSACFFNGVQTFFNKIESDKKELFVLEDMDHVLTMEPGNELILKKVTEWILNLSSN 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
........................................................ 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_1223500 11 QSTENDK|QK 0.063 .
PY17X_1223500 13 TENDKQK|SS 0.132 .
PY17X_1223500 16 DKQKSSK|SN 0.113 .
PY17X_1223500 20 SSKSNEK|TK 0.061 .
PY17X_1223500 22 KSNEKTK|KV 0.108 .
PY17X_1223500 23 SNEKTKK|VE 0.082 .
PY17X_1223500 26 KTKKVEK|LD 0.064 .
PY17X_1223500 30 VEKLDGK|PK 0.062 .
PY17X_1223500 32 KLDGKPK|TD 0.062 .
PY17X_1223500 39 TDTFHNK|NG 0.070 .
PY17X_1223500 45 KNGLAIK|TY 0.065 .
PY17X_1223500 52 TYAWEVK|NP 0.076 .
PY17X_1223500 69 GLSGNAR|LE 0.090 .
PY17X_1223500 74 ARLEYLK|HN 0.060 .
PY17X_1223500 84 ILEGYEK|AI 0.061 .
PY17X_1223500 88 YEKAIVK|DP 0.062 .
PY17X_1223500 97 DNFYIYK|GS 0.068 .
PY17X_1223500 106 WVDEFNK|KG 0.055 .
PY17X_1223500 107 VDEFNKK|GI 0.134 .
PY17X_1223500 129 DGWENLK|KH 0.058 .
PY17X_1223500 130 GWENLKK|HI 0.136 .
PY17X_1223500 148 VLQFINR|VH 0.072 .
PY17X_1223500 157 DTLCLEK|HK 0.060 .
PY17X_1223500 159 LCLEKHK|ND 0.061 .
PY17X_1223500 179 NNIINTK|LA 0.064 .
PY17X_1223500 197 GGNIVMR|LL 0.131 .
PY17X_1223500 204 LLETLGK|SK 0.082 .
PY17X_1223500 206 ETLGKSK|DI 0.067 .
PY17X_1223500 214 IATNNNK|IN 0.061 .
PY17X_1223500 218 NNKINIK|GA 0.073 .
PY17X_1223500 235 IEEVINK|PS 0.064 .
PY17X_1223500 239 INKPSYK|YF 0.067 .
PY17X_1223500 247 FYLPFSK|VL 0.066 .
PY17X_1223500 257 TVFPSLR|VI 0.077 .
PY17X_1223500 265 IPQLYFK|KF 0.059 .
PY17X_1223500 266 PQLYFKK|FP 0.087 .
PY17X_1223500 278 DIYCLDK|NV 0.075 .
PY17X_1223500 282 LDKNVCK|KP 0.065 .
PY17X_1223500 283 DKNVCKK|PI 0.139 .
PY17X_1223500 288 KKPITCK|LG 0.061 .
PY17X_1223500 295 LGYELFK|AV 0.083 .
PY17X_1223500 309 DINYFPK|DV 0.110 .
PY17X_1223500 319 LLFIHSK|ID 0.076 .
PY17X_1223500 335 VQTFFNK|IE 0.064 .
PY17X_1223500 340 NKIESDK|KE 0.062 .
PY17X_1223500 341 KIESDKK|EL 0.097 .
PY17X_1223500 364 GNELILK|KV 0.076 .
PY17X_1223500 365 NELILKK|VT 0.122 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation