PY17X_1225700 | plasmepsin X, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1225700SP0.0755740.9243570.000069CS pos: 25-26. ITC-NK. Pr: 0.8080
No Results

  • Fasta :-

    >PY17X_1225700 MKSIKILPVFYLVAFFLHNYNEITCNKLYITGDNFMPCSECKDINKCGGCLFDNNEALPS AIELKLTQKNRDNNNHDNLKIHHDSLKLGNVKYYVKRGEGVSGSFGNVSGNDINSMAEIH NEIKNRKEKKEENKSSLSFIDHSNNNNSEEGKGDYNFSKIQKHEQDGDKINTQEEFEKIQ SQAVNKSGVSFSDRVLDENGNQAQPSKGVTIEETSDNVFLVPLQHLRDSQFVGKLLVGTP PQEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGAIT GTLGKDNFILGNHIIRNQTFGLVKSETSDNLNNSDNVFEYINFEGIVGLGFPGMLTAGNI PFFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYYEGDIYMLPVIKEYYWEVKLD AIYIGDEKICCEEESYAIFDSGTSYNTMPSTQINNFFKIVSSKPCNEENYNDILKEYPSI KYVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTIFVRGQ EGNPSMVGVAKAKRV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1225700.fa Sequence name : PY17X_1225700 Sequence length : 555 VALUES OF COMPUTED PARAMETERS Coef20 : 4.061 CoefTot : -0.681 ChDiff : -14 ZoneTo : 21 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.612 1.729 0.167 0.652 MesoH : -0.270 0.293 -0.360 0.284 MuHd_075 : 14.173 8.617 5.113 2.594 MuHd_095 : 9.094 9.576 2.671 1.253 MuHd_100 : 15.557 13.713 5.287 3.130 MuHd_105 : 25.298 19.161 8.845 5.094 Hmax_075 : 16.917 20.300 3.361 7.187 Hmax_095 : 15.800 18.100 2.234 6.380 Hmax_100 : 17.200 21.000 3.513 7.360 Hmax_105 : 19.250 21.500 3.787 6.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9539 0.0461 DFMC : 0.9314 0.0686
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 555 PY17X_1225700 MKSIKILPVFYLVAFFLHNYNEITCNKLYITGDNFMPCSECKDINKCGGCLFDNNEALPSAIELKLTQKNRDNNNHDNLK 80 IHHDSLKLGNVKYYVKRGEGVSGSFGNVSGNDINSMAEIHNEIKNRKEKKEENKSSLSFIDHSNNNNSEEGKGDYNFSKI 160 QKHEQDGDKINTQEEFEKIQSQAVNKSGVSFSDRVLDENGNQAQPSKGVTIEETSDNVFLVPLQHLRDSQFVGKLLVGTP 240 PQEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGAITGTLGKDNFILGNHIIRNQTF 320 GLVKSETSDNLNNSDNVFEYINFEGIVGLGFPGMLTAGNIPFFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYY 400 EGDIYMLPVIKEYYWEVKLDAIYIGDEKICCEEESYAIFDSGTSYNTMPSTQINNFFKIVSSKPCNEENYNDILKEYPSI 480 KYVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTIFVRGQEGNPSMVGVAKAKRV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1225700 2 -----MK|SI 0.083 . PY17X_1225700 5 --MKSIK|IL 0.060 . PY17X_1225700 27 NEITCNK|LY 0.062 . PY17X_1225700 42 MPCSECK|DI 0.098 . PY17X_1225700 46 ECKDINK|CG 0.062 . PY17X_1225700 65 PSAIELK|LT 0.068 . PY17X_1225700 69 ELKLTQK|NR 0.058 . PY17X_1225700 71 KLTQKNR|DN 0.111 . PY17X_1225700 80 NNHDNLK|IH 0.070 . PY17X_1225700 87 IHHDSLK|LG 0.062 . PY17X_1225700 92 LKLGNVK|YY 0.062 . PY17X_1225700 96 NVKYYVK|RG 0.058 . PY17X_1225700 97 VKYYVKR|GE 0.250 . PY17X_1225700 124 EIHNEIK|NR 0.056 . PY17X_1225700 126 HNEIKNR|KE 0.114 . PY17X_1225700 127 NEIKNRK|EK 0.082 . PY17X_1225700 129 IKNRKEK|KE 0.143 . PY17X_1225700 130 KNRKEKK|EE 0.125 . PY17X_1225700 134 EKKEENK|SS 0.081 . PY17X_1225700 152 NNSEEGK|GD 0.069 . PY17X_1225700 159 GDYNFSK|IQ 0.073 . PY17X_1225700 162 NFSKIQK|HE 0.071 . PY17X_1225700 169 HEQDGDK|IN 0.070 . PY17X_1225700 178 TQEEFEK|IQ 0.080 . PY17X_1225700 186 QSQAVNK|SG 0.071 . PY17X_1225700 194 GVSFSDR|VL 0.141 . PY17X_1225700 207 NQAQPSK|GV 0.108 . PY17X_1225700 227 VPLQHLR|DS 0.095 . PY17X_1225700 234 DSQFVGK|LL 0.068 . PY17X_1225700 263 VVTTECK|ED 0.057 . PY17X_1225700 268 CKEDSCK|KV 0.090 . PY17X_1225700 269 KEDSCKK|VH 0.071 . PY17X_1225700 277 HQYNPNK|SK 0.073 . PY17X_1225700 279 YNPNKSK|TF 0.066 . PY17X_1225700 282 NKSKTFR|RS 0.137 . PY17X_1225700 283 KSKTFRR|SF 0.435 . PY17X_1225700 287 FRRSFIK|QN 0.076 . PY17X_1225700 305 ITGTLGK|DN 0.072 . PY17X_1225700 316 LGNHIIR|NQ 0.088 . PY17X_1225700 324 QTFGLVK|SE 0.062 . PY17X_1225700 368 FFDNLLK|QY 0.063 . PY17X_1225700 371 NLLKQYK|NM 0.065 . PY17X_1225700 397 IVGGISK|SY 0.076 . PY17X_1225700 411 YMLPVIK|EY 0.058 . PY17X_1225700 418 EYYWEVK|LD 0.062 . PY17X_1225700 428 IYIGDEK|IC 0.057 . PY17X_1225700 458 QINNFFK|IV 0.105 . PY17X_1225700 463 FKIVSSK|PC 0.065 . PY17X_1225700 475 NYNDILK|EY 0.059 . PY17X_1225700 481 KEYPSIK|YV 0.107 . PY17X_1225700 486 IKYVFGK|LV 0.109 . PY17X_1225700 530 GTIAFMR|HY 0.107 . PY17X_1225700 538 YFTIFVR|GQ 0.096 . PY17X_1225700 551 SMVGVAK|AK 0.077 . PY17X_1225700 553 VGVAKAK|RV 0.082 . PY17X_1225700 554 GVAKAKR|V- 0.178 . ____________________________^_________________

  • Fasta :-

    >PY17X_1225700 ATGAAGAGCATCAAAATATTACCCGTATTTTATTTGGTGGCATTTTTTTTGCACAACTAT AATGAGATAACCTGTAATAAATTATACATAACTGGAGATAATTTTATGCCTTGTTCAGAA TGTAAGGATATAAATAAGTGTGGTGGTTGTTTGTTTGATAACAATGAGGCTTTACCTAGT GCAATAGAATTAAAACTGACACAAAAAAACAGAGATAATAATAATCATGATAATTTAAAA ATTCATCATGATTCATTAAAATTAGGAAATGTAAAATATTATGTAAAAAGAGGAGAAGGG GTTTCAGGAAGTTTTGGGAATGTTTCAGGAAATGACATAAATAGTATGGCTGAGATTCAT AATGAAATAAAAAATCGAAAAGAAAAGAAAGAAGAAAATAAATCTTCTTTAAGTTTCATT GATCATAGTAATAATAATAATTCTGAAGAAGGAAAAGGAGATTATAATTTTTCAAAAATA CAAAAACATGAACAGGATGGAGATAAAATAAATACACAAGAAGAATTTGAAAAAATACAA AGTCAAGCTGTTAACAAATCTGGAGTTTCATTTTCTGATCGTGTTTTAGATGAAAATGGA AATCAAGCTCAGCCTTCCAAAGGTGTAACTATTGAAGAAACAAGTGACAATGTATTTTTA GTTCCTTTACAACATTTAAGAGATAGTCAATTTGTGGGTAAGTTATTGGTAGGTACACCT CCTCAAGAAATTCATCCAATATTTGATACAGGGAGTACAAATTTATGGGTAGTTACAACT GAATGTAAAGAAGATTCATGTAAAAAAGTACATCAATATAATCCGAACAAATCTAAAACA TTTAGAAGATCTTTTATAAAACAAAATTTACATATCGTTTTTGGATCTGGAGCAATAACT GGTACATTAGGTAAAGACAATTTTATATTAGGTAATCATATAATACGCAATCAAACTTTT GGGTTAGTTAAAAGTGAAACTAGTGATAATTTAAATAATTCTGATAATGTTTTTGAATAT ATAAATTTTGAAGGTATAGTAGGATTAGGTTTTCCTGGTATGCTAACTGCAGGAAATATT CCATTTTTTGATAATTTATTAAAACAATATAAAAATATGACACCTCAATTTTCTTTTTAT ATATCTCCAAATGATGAAACATCTACATTTATAGTTGGTGGAATAAGCAAATCATATTAT GAAGGAGATATATATATGTTACCTGTTATTAAAGAATATTATTGGGAAGTTAAATTAGAT GCTATATATATAGGAGATGAAAAAATATGTTGTGAAGAGGAAAGTTATGCAATATTTGAT TCAGGAACTTCTTACAATACAATGCCTAGTACTCAAATAAATAATTTTTTTAAGATCGTT TCATCAAAACCATGTAATGAAGAAAATTATAATGATATATTAAAAGAATATCCATCTATA AAATATGTTTTTGGAAAACTAGTGATTGAACTATTACCTAATGAATATATGATTGTAAAT GATGATTTATGTGTTCCAGCATATATGCAGATAGATGTTCCATCAGAAAATAACAATGCT TATCTTCTTGGAACCATAGCTTTTATGAGACATTATTTTACAATTTTTGTGAGAGGGCAA GAAGGGAATCCATCTATGGTTGGAGTGGCAAAAGCTAAACGAGTTTAA
  • Download Fasta

  • Fasta :-

    MKSIKILPVFYLVAFFLHNYNEITCNKLYITGDNFMPCSECKDINKCGGCLFDNNEALPS AIELKLTQKNRDNNNHDNLKIHHDSLKLGNVKYYVKRGEGVSGSFGNVSGNDINSMAEIH NEIKNRKEKKEENKSSLSFIDHSNNNNSEEGKGDYNFSKIQKHEQDGDKINTQEEFEKIQ SQAVNKSGVSFSDRVLDENGNQAQPSKGVTIEETSDNVFLVPLQHLRDSQFVGKLLVGTP PQEIHPIFDTGSTNLWVVTTECKEDSCKKVHQYNPNKSKTFRRSFIKQNLHIVFGSGAIT GTLGKDNFILGNHIIRNQTFGLVKSETSDNLNNSDNVFEYINFEGIVGLGFPGMLTAGNI PFFDNLLKQYKNMTPQFSFYISPNDETSTFIVGGISKSYYEGDIYMLPVIKEYYWEVKLD AIYIGDEKICCEEESYAIFDSGTSYNTMPSTQINNFFKIVSSKPCNEENYNDILKEYPSI KYVFGKLVIELLPNEYMIVNDDLCVPAYMQIDVPSENNNAYLLGTIAFMRHYFTIFVRGQ EGNPSMVGVAKAKRV

  • title: catalytic residue
  • coordinates: D249,D440
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1225700398 SGISKSYYEG0.994unspPY17X_1225700398 SGISKSYYEG0.994unspPY17X_1225700398 SGISKSYYEG0.994unspPY17X_1225700436 YEEESYAIFD0.99unspPY17X_1225700138 SKSSLSFIDH0.994unspPY17X_1225700382 SSFYISPNDE0.992unsp
PY17X_1225700


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India