PY17X_1226100 | 26S proteasome regulatory subunit RPN10, putative

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_IDPredictionOTHERSPmTPCS_Position
PY17X_1226100OTHER0.9999860.0000140.000000
No Results

  • Fasta :-

    >PY17X_1226100 MSNIEATIICIDNSDYNMNEDIVPNRFMSQIDCVNILCCNKTSMHYKNSIGVLVMAGDGI KIKVSLTNDIGQLLSCIHGIKIEGSCDIIRSLLIAQLALKHRIDKNLEQKIIIFIGSPIE ANEKQLISTGKQLKKNNISIDIISYGNVNKNREKLNKLFESINNNGNCRIIECPEDEDNL STYVLNKILNNNNYNMNNLDEDEQLLTAMELSMGSNNNTQNIPNNNSQSNNINSKSNHND LPTIQDIENMKDIDNELKEALLLSLKEYNEKNKTDNENSKINSESKNGENEKNGENITIV SEEYKNVFDNEKTDAQTKQIGEKKENESYEKVFKICKDENIEEDNNKFQINSNIYINTED NIKNINKETTDDKNTSSIQDTNYISQILEQIPGSSANLLDKNADAEKEPGTKEPDTKEPK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1226100.fa Sequence name : PY17X_1226100 Sequence length : 420 VALUES OF COMPUTED PARAMETERS Coef20 : 3.592 CoefTot : -0.022 ChDiff : -23 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.329 1.418 -0.008 0.489 MesoH : -0.447 0.626 -0.247 0.241 MuHd_075 : 7.444 10.524 4.566 2.063 MuHd_095 : 12.051 7.499 3.572 2.391 MuHd_100 : 15.776 12.616 4.233 3.498 MuHd_105 : 19.352 14.145 4.681 3.721 Hmax_075 : 9.917 12.950 1.544 4.527 Hmax_095 : 6.738 7.700 0.762 3.460 Hmax_100 : 8.600 13.100 1.694 4.530 Hmax_105 : 17.900 15.800 2.983 5.250 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9879 0.0121 DFMC : 0.9906 0.0094
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 420 PY17X_1226100 MSNIEATIICIDNSDYNMNEDIVPNRFMSQIDCVNILCCNKTSMHYKNSIGVLVMAGDGIKIKVSLTNDIGQLLSCIHGI 80 KIEGSCDIIRSLLIAQLALKHRIDKNLEQKIIIFIGSPIEANEKQLISTGKQLKKNNISIDIISYGNVNKNREKLNKLFE 160 SINNNGNCRIIECPEDEDNLSTYVLNKILNNNNYNMNNLDEDEQLLTAMELSMGSNNNTQNIPNNNSQSNNINSKSNHND 240 LPTIQDIENMKDIDNELKEALLLSLKEYNEKNKTDNENSKINSESKNGENEKNGENITIVSEEYKNVFDNEKTDAQTKQI 320 GEKKENESYEKVFKICKDENIEEDNNKFQINSNIYINTEDNIKNINKETTDDKNTSSIQDTNYISQILEQIPGSSANLLD 400 KNADAEKEPGTKEPDTKEPK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1226100 26 EDIVPNR|FM 0.119 . PY17X_1226100 41 NILCCNK|TS 0.055 . PY17X_1226100 47 KTSMHYK|NS 0.104 . PY17X_1226100 61 MAGDGIK|IK 0.055 . PY17X_1226100 63 GDGIKIK|VS 0.063 . PY17X_1226100 81 SCIHGIK|IE 0.060 . PY17X_1226100 90 GSCDIIR|SL 0.127 . PY17X_1226100 100 IAQLALK|HR 0.059 . PY17X_1226100 102 QLALKHR|ID 0.091 . PY17X_1226100 105 LKHRIDK|NL 0.215 . PY17X_1226100 110 DKNLEQK|II 0.068 . PY17X_1226100 124 PIEANEK|QL 0.061 . PY17X_1226100 131 QLISTGK|QL 0.071 . PY17X_1226100 134 STGKQLK|KN 0.068 . PY17X_1226100 135 TGKQLKK|NN 0.093 . PY17X_1226100 150 SYGNVNK|NR 0.064 . PY17X_1226100 152 GNVNKNR|EK 0.108 . PY17X_1226100 154 VNKNREK|LN 0.059 . PY17X_1226100 157 NREKLNK|LF 0.076 . PY17X_1226100 169 NNNGNCR|II 0.110 . PY17X_1226100 187 STYVLNK|IL 0.064 . PY17X_1226100 235 SNNINSK|SN 0.113 . PY17X_1226100 251 QDIENMK|DI 0.087 . PY17X_1226100 258 DIDNELK|EA 0.052 . PY17X_1226100 266 ALLLSLK|EY 0.055 . PY17X_1226100 271 LKEYNEK|NK 0.068 . PY17X_1226100 273 EYNEKNK|TD 0.060 . PY17X_1226100 280 TDNENSK|IN 0.082 . PY17X_1226100 286 KINSESK|NG 0.068 . PY17X_1226100 292 KNGENEK|NG 0.065 . PY17X_1226100 305 IVSEEYK|NV 0.110 . PY17X_1226100 312 NVFDNEK|TD 0.055 . PY17X_1226100 318 KTDAQTK|QI 0.076 . PY17X_1226100 323 TKQIGEK|KE 0.062 . PY17X_1226100 324 KQIGEKK|EN 0.124 . PY17X_1226100 331 ENESYEK|VF 0.055 . PY17X_1226100 334 SYEKVFK|IC 0.063 . PY17X_1226100 337 KVFKICK|DE 0.067 . PY17X_1226100 347 IEEDNNK|FQ 0.063 . PY17X_1226100 363 NTEDNIK|NI 0.059 . PY17X_1226100 367 NIKNINK|ET 0.070 . PY17X_1226100 373 KETTDDK|NT 0.073 . PY17X_1226100 401 SANLLDK|NA 0.075 . PY17X_1226100 407 KNADAEK|EP 0.079 . PY17X_1226100 412 EKEPGTK|EP 0.064 . PY17X_1226100 417 TKEPDTK|EP 0.065 . PY17X_1226100 420 PDTKEPK|-- 0.063 . ____________________________^_________________

  • Fasta :-

    >PY17X_1226100 ATGAGCAATATCGAAGCTACAATCATTTGTATAGATAACAGCGATTATAACATGAACGAA GATATCGTTCCGAATCGGTTTATGTCACAGATCGATTGTGTGAACATACTATGCTGCAAC AAAACCAGTATGCATTACAAAAACAGTATAGGAGTATTAGTTATGGCAGGAGATGGAATA AAAATAAAAGTATCTTTAACAAACGATATCGGACAGTTATTATCTTGTATTCATGGAATA AAAATAGAGGGTTCATGCGATATAATAAGAAGTTTGCTTATTGCACAATTAGCATTAAAA CATAGAATCGATAAAAATTTAGAACAAAAAATAATAATATTTATTGGTAGCCCTATAGAA GCTAATGAAAAACAATTAATAAGTACCGGAAAGCAATTAAAAAAAAATAACATATCTATT GATATAATTAGTTATGGAAATGTAAATAAAAATAGAGAAAAATTAAATAAATTATTTGAA TCAATAAATAATAATGGAAATTGTAGAATCATTGAATGTCCAGAAGATGAAGATAATTTA AGTACATATGTTTTAAACAAAATTTTAAATAATAATAATTATAATATGAACAATTTAGAT GAAGATGAACAATTATTAACAGCAATGGAATTATCTATGGGATCAAATAATAATACACAA AATATTCCAAACAATAATTCACAATCTAATAATATAAATTCTAAATCAAATCATAATGAT TTACCAACTATACAAGATATTGAAAACATGAAAGATATTGATAATGAACTAAAGGAAGCA TTATTATTATCTTTAAAAGAATATAACGAAAAAAATAAAACAGATAATGAAAATAGTAAA ATTAATTCTGAATCAAAAAATGGGGAAAATGAAAAAAATGGGGAAAATATTACAATAGTT AGTGAAGAATATAAAAATGTTTTTGATAATGAAAAAACAGATGCACAAACAAAACAAATA GGAGAAAAAAAAGAAAACGAAAGTTATGAAAAAGTATTTAAAATATGTAAAGATGAAAAT ATAGAAGAAGATAATAATAAATTTCAAATAAATTCAAATATTTATATCAATACAGAAGAT AATATTAAGAATATAAATAAAGAAACAACAGATGACAAAAATACATCTTCTATTCAAGAT ACAAATTATATATCTCAAATTTTGGAGCAAATACCAGGAAGTTCAGCTAATTTGCTTGAT AAAAATGCAGATGCCGAAAAAGAACCTGGCACTAAGGAGCCTGACACTAAGGAGCCTAAG TAG
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  • Fasta :-

    MSNIEATIICIDNSDYNMNEDIVPNRFMSQIDCVNILCCNKTSMHYKNSIGVLVMAGDGI KIKVSLTNDIGQLLSCIHGIKIEGSCDIIRSLLIAQLALKHRIDKNLEQKIIIFIGSPIE ANEKQLISTGKQLKKNNISIDIISYGNVNKNREKLNKLFESINNNGNCRIIECPEDEDNL STYVLNKILNNNNYNMNNLDEDEQLLTAMELSMGSNNNTQNIPNNNSQSNNINSKSNHND LPTIQDIENMKDIDNELKEALLLSLKEYNEKNKTDNENSKINSESKNGENEKNGENITIV SEEYKNVFDNEKTDAQTKQIGEKKENESYEKVFKICKDENIEEDNNKFQINSNIYINTED NIKNINKETTDDKNTSSIQDTNYISQILEQIPGSSANLLDKNADAEKEPGTKEPDTKEPK

  • title: metal ion-dependent adhesion site (MIDAS)
  • coordinates: D12,C86,G116
No Results
No Results
IDSitePeptideScoreMethod
PY17X_122610029 SNRFMSQIDC0.994unsp
PY17X_1226100


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India