PY17X_1226300 | proteasome subunit alpha type-6, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1226300OTHER0.9994850.0002740.000242
No Results

  • Fasta :-

    >PY17X_1226300 MVRQSQSMYDRHLTIFSPDGNLYQIEYAIKAVKNTNITSLGVKGENCAVIISQKKMATQY ITQDKLLDYNNITNIYNISDEIGCSMVGMPGDCLSMVYKARSEASEYLYNNGYNLNVETL CRNICDKIQVFTQHAYMRLHACSGILIGMNEDNKPELYKFDPAGFCAGYRACVIGNKEQE SISILERLLEKRKKKIQQETIEEDIQNTIILAIEALQAILAFDLKANEIEMAIVSKKNPN FIQISEKEIDNYLTFIAERD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1226300.fa Sequence name : PY17X_1226300 Sequence length : 260 VALUES OF COMPUTED PARAMETERS Coef20 : 3.774 CoefTot : -0.108 ChDiff : -6 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.141 1.882 0.245 0.655 MesoH : -0.829 0.072 -0.388 0.133 MuHd_075 : 3.995 3.733 1.471 0.924 MuHd_095 : 33.034 14.749 5.718 7.001 MuHd_100 : 31.622 17.345 5.763 7.429 MuHd_105 : 25.289 15.162 4.748 6.403 Hmax_075 : 2.800 0.600 -2.081 1.423 Hmax_095 : 9.450 5.775 -0.465 3.098 Hmax_100 : 10.500 7.400 -0.667 3.720 Hmax_105 : 9.700 8.100 -0.439 4.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9626 0.0374 DFMC : 0.9836 0.0164
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 260 PY17X_1226300 MVRQSQSMYDRHLTIFSPDGNLYQIEYAIKAVKNTNITSLGVKGENCAVIISQKKMATQYITQDKLLDYNNITNIYNISD 80 EIGCSMVGMPGDCLSMVYKARSEASEYLYNNGYNLNVETLCRNICDKIQVFTQHAYMRLHACSGILIGMNEDNKPELYKF 160 DPAGFCAGYRACVIGNKEQESISILERLLEKRKKKIQQETIEEDIQNTIILAIEALQAILAFDLKANEIEMAIVSKKNPN 240 FIQISEKEIDNYLTFIAERD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1226300 3 ----MVR|QS 0.084 . PY17X_1226300 11 SQSMYDR|HL 0.107 . PY17X_1226300 30 QIEYAIK|AV 0.070 . PY17X_1226300 33 YAIKAVK|NT 0.059 . PY17X_1226300 43 ITSLGVK|GE 0.063 . PY17X_1226300 54 AVIISQK|KM 0.060 . PY17X_1226300 55 VIISQKK|MA 0.135 . PY17X_1226300 65 QYITQDK|LL 0.064 . PY17X_1226300 99 CLSMVYK|AR 0.081 . PY17X_1226300 101 SMVYKAR|SE 0.126 . PY17X_1226300 122 NVETLCR|NI 0.096 . PY17X_1226300 127 CRNICDK|IQ 0.066 . PY17X_1226300 138 TQHAYMR|LH 0.097 . PY17X_1226300 154 GMNEDNK|PE 0.056 . PY17X_1226300 159 NKPELYK|FD 0.072 . PY17X_1226300 170 GFCAGYR|AC 0.083 . PY17X_1226300 177 ACVIGNK|EQ 0.056 . PY17X_1226300 187 SISILER|LL 0.096 . PY17X_1226300 191 LERLLEK|RK 0.060 . PY17X_1226300 192 ERLLEKR|KK 0.188 . PY17X_1226300 193 RLLEKRK|KK 0.095 . PY17X_1226300 194 LLEKRKK|KI 0.122 . PY17X_1226300 195 LEKRKKK|IQ 0.273 . PY17X_1226300 225 ILAFDLK|AN 0.068 . PY17X_1226300 236 EMAIVSK|KN 0.062 . PY17X_1226300 237 MAIVSKK|NP 0.105 . PY17X_1226300 247 FIQISEK|EI 0.078 . PY17X_1226300 259 LTFIAER|D- 0.096 . ____________________________^_________________

  • Fasta :-

    >PY17X_1226300 ATGGTACGACAATCACAGAGTATGTATGATAGGCATTTAACCATCTTTTCTCCTGATGGA AATCTTTATCAAATAGAATATGCCATAAAAGCAGTTAAAAATACCAATATAACATCCTTA GGTGTAAAGGGAGAAAATTGTGCTGTCATAATTTCTCAAAAAAAAATGGCAACACAATAT ATAACTCAAGATAAGTTATTAGATTATAATAATATAACAAATATTTATAACATATCAGAT GAAATTGGATGTTCTATGGTTGGTATGCCTGGAGATTGTCTTAGCATGGTTTATAAAGCC AGATCTGAGGCTTCCGAATATTTATATAATAATGGATATAATTTAAACGTTGAAACATTA TGTAGAAATATTTGCGATAAAATTCAAGTATTTACCCAGCATGCTTATATGAGATTACAC GCTTGCAGTGGAATACTTATTGGAATGAATGAAGACAATAAACCTGAACTTTATAAATTC GACCCAGCAGGTTTTTGTGCTGGGTATAGAGCATGTGTTATTGGAAATAAAGAACAAGAA AGCATAAGTATTTTAGAAAGATTATTGGAAAAGAGAAAAAAGAAAATACAACAAGAAACC ATAGAAGAAGATATACAAAATACTATTATACTAGCTATTGAAGCATTGCAAGCAATTCTT GCTTTTGATTTAAAAGCTAATGAAATAGAAATGGCCATAGTGTCAAAAAAAAATCCAAAT TTCATACAAATAAGTGAAAAAGAAATAGACAATTACTTAACTTTTATTGCGGAAAGAGAT TAA
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  • Fasta :-

    MVRQSQSMYDRHLTIFSPDGNLYQIEYAIKAVKNTNITSLGVKGENCAVIISQKKMATQY ITQDKLLDYNNITNIYNISDEIGCSMVGMPGDCLSMVYKARSEASEYLYNNGYNLNVETL CRNICDKIQVFTQHAYMRLHACSGILIGMNEDNKPELYKFDPAGFCAGYRACVIGNKEQE SISILERLLEKRKKKIQQETIEEDIQNTIILAIEALQAILAFDLKANEIEMAIVSKKNPN FIQISEKEIDNYLTFIAERD

  • title: active site
  • coordinates: I37,Q53,K55,N74,N176
No Results
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PY17X_1226300


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India