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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1245300.fa
Sequence name : PY17X_1245300
Sequence length : 330
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.162
CoefTot : -1.230
ChDiff : -1
ZoneTo : 37
KR : 7
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.500 0.747 0.093 0.451
MesoH : -0.767 0.037 -0.389 0.178
MuHd_075 : 17.565 16.315 6.101 4.059
MuHd_095 : 31.170 20.715 8.853 7.444
MuHd_100 : 32.766 20.600 9.390 7.164
MuHd_105 : 27.493 18.341 8.386 6.504
Hmax_075 : -0.437 17.850 0.419 5.623
Hmax_095 : 12.075 6.125 -0.092 3.754
Hmax_100 : 14.800 10.000 0.777 5.230
Hmax_105 : 15.400 10.100 1.672 5.360
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.2126 0.7874
DFMC : 0.2435 0.7565
This protein is probably imported in mitochondria.
f(Ser) = 0.0811 f(Arg) = 0.0541 CMi = 0.55659
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
330 PY17X_1245300
MLYLYKNWTTRFSHISKQKFNFHTYVLTPKLNKIRVSETSLFKPTLEDGKYKVIPAKNVPTHIKSPSYAKTGVVECSNNI 80
YEIKDEDSIIKMKKAAKLAANCLKLCLENSKEGITTEEIDNLAFNFYIQNNAYPAGINFHGFPKTVCASPNEVVCHGIPN 160
LRKLKNKDIITYDCTVYFDGVFGDCAGTTGIGDISEKHKKLIQVSKECLYEAISICRDGQKFSEIGRVITEHAHKNGFNV 240
IKDFCGHFIGTNMHMYPLIEHHYPNGHEQNEYMKKGQIFTIEPILSEGSINIHTWKDQWTVCTNDNSFCSQWEHTILITD 320
NSAEILTECE 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
.......... 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_1245300 6 -MLYLYK|NW 0.060 .
PY17X_1245300 11 YKNWTTR|FS 0.135 .
PY17X_1245300 17 RFSHISK|QK 0.070 .
PY17X_1245300 19 SHISKQK|FN 0.072 .
PY17X_1245300 30 TYVLTPK|LN 0.059 .
PY17X_1245300 33 LTPKLNK|IR 0.052 .
PY17X_1245300 35 PKLNKIR|VS 0.099 .
PY17X_1245300 43 SETSLFK|PT 0.057 .
PY17X_1245300 50 PTLEDGK|YK 0.054 .
PY17X_1245300 52 LEDGKYK|VI 0.065 .
PY17X_1245300 57 YKVIPAK|NV 0.089 .
PY17X_1245300 64 NVPTHIK|SP 0.090 .
PY17X_1245300 70 KSPSYAK|TG 0.055 .
PY17X_1245300 84 NNIYEIK|DE 0.084 .
PY17X_1245300 91 DEDSIIK|MK 0.058 .
PY17X_1245300 93 DSIIKMK|KA 0.067 .
PY17X_1245300 94 SIIKMKK|AA 0.124 .
PY17X_1245300 97 KMKKAAK|LA 0.070 .
PY17X_1245300 104 LAANCLK|LC 0.058 .
PY17X_1245300 111 LCLENSK|EG 0.058 .
PY17X_1245300 144 NFHGFPK|TV 0.098 .
PY17X_1245300 162 HGIPNLR|KL 0.071 .
PY17X_1245300 163 GIPNLRK|LK 0.075 .
PY17X_1245300 165 PNLRKLK|NK 0.116 .
PY17X_1245300 167 LRKLKNK|DI 0.122 .
PY17X_1245300 197 IGDISEK|HK 0.061 .
PY17X_1245300 199 DISEKHK|KL 0.082 .
PY17X_1245300 200 ISEKHKK|LI 0.113 .
PY17X_1245300 206 KLIQVSK|EC 0.062 .
PY17X_1245300 217 EAISICR|DG 0.079 .
PY17X_1245300 221 ICRDGQK|FS 0.079 .
PY17X_1245300 227 KFSEIGR|VI 0.091 .
PY17X_1245300 235 ITEHAHK|NG 0.068 .
PY17X_1245300 242 NGFNVIK|DF 0.084 .
PY17X_1245300 274 EQNEYMK|KG 0.059 .
PY17X_1245300 275 QNEYMKK|GQ 0.097 .
PY17X_1245300 296 INIHTWK|DQ 0.078 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation